RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
SCARB2-221ENST00000640341 CCDC7Q96M83 1385 aa20.03■□□□□ 0.8
SCARB2-221ENST00000640341 KIF7Q2M1P5 1343 aa20.01■□□□□ 0.79
SCARB2-221ENST00000640341 CNTLNQ9NXG0 1405 aa20.01■□□□□ 0.79
SCARB2-221ENST00000640341 KIF21AQ7Z4S6 1674 aa20.01■□□□□ 0.79
SCARB2-221ENST00000640341 KDM2AQ9Y2K7 1162 aa20.01■□□□□ 0.79
SCARB2-221ENST00000640341 ERICH6Q7L0X2 663 aa20■□□□□ 0.79
SCARB2-221ENST00000640341 IQGAP2Q13576 1575 aa20■□□□□ 0.79
SCARB2-221ENST00000640341 HECW1Q76N89 1606 aa20■□□□□ 0.79
SCARB2-221ENST00000640341 CHMP7Q8WUX9 453 aaPredicted RBP19.98■□□□□ 0.79
SCARB2-221ENST00000640341 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
SCARB2-221ENST00000640341 PKD2Q13563 968 aa19.97■□□□□ 0.79
SCARB2-221ENST00000640341 DAPK1P53355 1430 aa19.97■□□□□ 0.79
SCARB2-221ENST00000640341 ANKRD30BQ9BXX2 1392 aa19.96■□□□□ 0.79
SCARB2-221ENST00000640341 MIA2Q96PC5 1412 aa19.96■□□□□ 0.79
SCARB2-221ENST00000640341 TCOF1Q13428 1488 aaKnown RBP19.95■□□□□ 0.78
SCARB2-221ENST00000640341 ABCC5O15440 1437 aa19.95■□□□□ 0.78
SCARB2-221ENST00000640341 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
SCARB2-221ENST00000640341 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
SCARB2-221ENST00000640341 MSH5O43196 834 aa19.94■□□□□ 0.78
SCARB2-221ENST00000640341 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
SCARB2-221ENST00000640341 PPP4R2Q9NY27 417 aa19.92■□□□□ 0.78
SCARB2-221ENST00000640341 SALL2Q9Y467 1007 aaPredicted RBP19.92■□□□□ 0.78
SCARB2-221ENST00000640341 NCOA1Q15788 1441 aa19.91■□□□□ 0.78
SCARB2-221ENST00000640341 WDR62O43379 1518 aa19.88■□□□□ 0.77
SCARB2-221ENST00000640341 RPRD2Q5VT52 1461 aaKnown RBP19.88■□□□□ 0.77
SCARB2-221ENST00000640341 CARD11Q9BXL7 1154 aa19.86■□□□□ 0.77
SCARB2-221ENST00000640341 ZBED9Q6R2W3 1325 aa19.86■□□□□ 0.77
SCARB2-221ENST00000640341 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
SCARB2-221ENST00000640341 TMC1Q8TDI8 760 aa19.85■□□□□ 0.77
SCARB2-221ENST00000640341 AKNAQ7Z591 1439 aa19.85■□□□□ 0.77
SCARB2-221ENST00000640341 NUP153P49790 1475 aaKnown RBP19.85■□□□□ 0.77
SCARB2-221ENST00000640341 USP47Q96K76 1375 aa19.84■□□□□ 0.77
SCARB2-221ENST00000640341 ADAMTS12P58397 1594 aa19.84■□□□□ 0.77
SCARB2-221ENST00000640341 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
SCARB2-221ENST00000640341 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.77
SCARB2-221ENST00000640341 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
SCARB2-221ENST00000640341 ROCK1Q13464 1354 aa19.82■□□□□ 0.76
SCARB2-221ENST00000640341 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
SCARB2-221ENST00000640341 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
SCARB2-221ENST00000640341 NUP155O75694 1391 aa19.82■□□□□ 0.76
SCARB2-221ENST00000640341 RGL3Q3MIN7 710 aa19.81■□□□□ 0.76
SCARB2-221ENST00000640341 TEX14Q8IWB6 1497 aa19.81■□□□□ 0.76
SCARB2-221ENST00000640341 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
SCARB2-221ENST00000640341 DISP1Q96F81 1524 aa19.8■□□□□ 0.76
SCARB2-221ENST00000640341 TSPY4P0CV99 314 aa19.8■□□□□ 0.76
SCARB2-221ENST00000640341 TSPY10P0CW01 314 aa19.8■□□□□ 0.76
SCARB2-221ENST00000640341 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
SCARB2-221ENST00000640341 KIAA0586Q9BVV6 1533 aa19.79■□□□□ 0.76
SCARB2-221ENST00000640341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.79■□□□□ 0.76
SCARB2-221ENST00000640341 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
SCARB2-221ENST00000640341 CCDC136Q96JN2 1154 aa19.77■□□□□ 0.76
SCARB2-221ENST00000640341 CAMSAP2Q08AD1 1489 aa19.76■□□□□ 0.75
SCARB2-221ENST00000640341 ANKRD30AQ9BXX3 1397 aa19.76■□□□□ 0.75
SCARB2-221ENST00000640341 TROQ12816 1431 aaPredicted RBP19.75■□□□□ 0.75
SCARB2-221ENST00000640341 SPATA31E1Q6ZUB1 1445 aa19.75■□□□□ 0.75
SCARB2-221ENST00000640341 PZPP20742 1482 aa19.74■□□□□ 0.75
SCARB2-221ENST00000640341 KIAA0556O60303 1618 aa19.73■□□□□ 0.75
SCARB2-221ENST00000640341 ANKRD50Q9ULJ7 1429 aa19.73■□□□□ 0.75
SCARB2-221ENST00000640341 ERCC6Q03468 1493 aa19.72■□□□□ 0.75
SCARB2-221ENST00000640341 GRIN2AQ12879 1464 aa19.72■□□□□ 0.75
SCARB2-221ENST00000640341 KIAA1107Q9UPP5 1409 aa19.72■□□□□ 0.75
SCARB2-221ENST00000640341 DNMT1P26358 1616 aaKnown RBP19.72■□□□□ 0.75
SCARB2-221ENST00000640341 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
SCARB2-221ENST00000640341 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
SCARB2-221ENST00000640341 ERICH6BQ5W0A0 696 aa19.71■□□□□ 0.75
SCARB2-221ENST00000640341 FANCIQ9NVI1 1328 aa19.71■□□□□ 0.75
SCARB2-221ENST00000640341 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
SCARB2-221ENST00000640341 RAPGEF6Q8TEU7 1601 aa19.7■□□□□ 0.74
SCARB2-221ENST00000640341 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
SCARB2-221ENST00000640341 NBR1Q14596 966 aa19.68■□□□□ 0.74
SCARB2-221ENST00000640341 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
SCARB2-221ENST00000640341 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
SCARB2-221ENST00000640341 KIF14Q15058 1648 aa19.65■□□□□ 0.74
SCARB2-221ENST00000640341 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.74
SCARB2-221ENST00000640341 ROCK2O75116 1388 aaKnown RBP19.63■□□□□ 0.73
SCARB2-221ENST00000640341 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
SCARB2-221ENST00000640341 NBPF1Q3BBV0 1214 aa19.61■□□□□ 0.73
SCARB2-221ENST00000640341 C9orf84Q5VXU9 1444 aa19.61■□□□□ 0.73
SCARB2-221ENST00000640341 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
SCARB2-221ENST00000640341 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
SCARB2-221ENST00000640341 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
SCARB2-221ENST00000640341 BCORL1Q5H9F3 1711 aa19.58■□□□□ 0.72
SCARB2-221ENST00000640341 SMG6Q86US8 1419 aaKnown RBP19.57■□□□□ 0.72
SCARB2-221ENST00000640341 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
SCARB2-221ENST00000640341 MYBBP1AQ9BQG0 1328 aaKnown RBP19.54■□□□□ 0.72
SCARB2-221ENST00000640341 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
SCARB2-221ENST00000640341 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
SCARB2-221ENST00000640341 NOP58Q9Y2X3 529 aaKnown RBP19.53■□□□□ 0.72
SCARB2-221ENST00000640341 CDCA7LQ96GN5 454 aa19.53■□□□□ 0.72
SCARB2-221ENST00000640341 ANP32AP39687 249 aaKnown RBP19.53■□□□□ 0.72
SCARB2-221ENST00000640341 PLIN1O60240 522 aa19.52■□□□□ 0.72
SCARB2-221ENST00000640341 SYNJ2O15056 1496 aa19.52■□□□□ 0.71
SCARB2-221ENST00000640341 MBD5Q9P267 1494 aa19.51■□□□□ 0.71
SCARB2-221ENST00000640341 ATP10BO94823 1461 aa19.51■□□□□ 0.71
SCARB2-221ENST00000640341 MAGI1Q96QZ7 1491 aaPredicted RBP19.51■□□□□ 0.71
SCARB2-221ENST00000640341 RALBP1Q15311 655 aa19.5■□□□□ 0.71
SCARB2-221ENST00000640341 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
SCARB2-221ENST00000640341 ARID4BQ4LE39 1312 aaPredicted RBP19.49■□□□□ 0.71
SCARB2-221ENST00000640341 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms