RNA–Protein interactions for RNA: ENST00000640182.1

KCNMA1-279, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-279ENST00000640182 NCOA2Q15596 1464 aa17.16■□□□□ 0.34
KCNMA1-279ENST00000640182 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
KCNMA1-279ENST00000640182 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
KCNMA1-279ENST00000640182 MYOM3Q5VTT5 1437 aa17.15■□□□□ 0.34
KCNMA1-279ENST00000640182 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
KCNMA1-279ENST00000640182 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
KCNMA1-279ENST00000640182 ROCK2O75116 1388 aaKnown RBP17.13■□□□□ 0.33
KCNMA1-279ENST00000640182 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
KCNMA1-279ENST00000640182 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
KCNMA1-279ENST00000640182 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
KCNMA1-279ENST00000640182 CASKIN1Q8WXD9 1431 aa17.12■□□□□ 0.33
KCNMA1-279ENST00000640182 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
KCNMA1-279ENST00000640182 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
KCNMA1-279ENST00000640182 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
KCNMA1-279ENST00000640182 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
KCNMA1-279ENST00000640182 PPM1GO15355 546 aaPredicted RBP17.09■□□□□ 0.33
KCNMA1-279ENST00000640182 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
KCNMA1-279ENST00000640182 CCDC146Q8IYE0 955 aa17.09■□□□□ 0.33
KCNMA1-279ENST00000640182 CCDC7Q96M83 1385 aa17.08■□□□□ 0.33
KCNMA1-279ENST00000640182 USP47Q96K76 1375 aa17.08■□□□□ 0.32
KCNMA1-279ENST00000640182 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
KCNMA1-279ENST00000640182 TMF1P82094 1093 aa17.07■□□□□ 0.32
KCNMA1-279ENST00000640182 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
KCNMA1-279ENST00000640182 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
KCNMA1-279ENST00000640182 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
KCNMA1-279ENST00000640182 PANK3Q9H999 370 aa17.05■□□□□ 0.32
KCNMA1-279ENST00000640182 DEKP35659 375 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-279ENST00000640182 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
KCNMA1-279ENST00000640182 NEFMP07197 916 aa17.04■□□□□ 0.32
KCNMA1-279ENST00000640182 GGT6Q6P531 493 aa17.04■□□□□ 0.32
KCNMA1-279ENST00000640182 NAIPQ13075 1403 aa17.03■□□□□ 0.32
KCNMA1-279ENST00000640182 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-279ENST00000640182 NBPF1Q3BBV0 1214 aa17.02■□□□□ 0.31
KCNMA1-279ENST00000640182 PTPRKQ15262 1439 aa17.02■□□□□ 0.31
KCNMA1-279ENST00000640182 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
KCNMA1-279ENST00000640182 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
KCNMA1-279ENST00000640182 EIF5BO60841 1220 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-279ENST00000640182 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
KCNMA1-279ENST00000640182 SLC4A3P48751 1232 aa17■□□□□ 0.31
KCNMA1-279ENST00000640182 KTN1Q86UP2 1357 aaKnown RBP17■□□□□ 0.31
KCNMA1-279ENST00000640182 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
KCNMA1-279ENST00000640182 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
KCNMA1-279ENST00000640182 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
KCNMA1-279ENST00000640182 HFM1A2PYH4 1435 aa16.98■□□□□ 0.31
KCNMA1-279ENST00000640182 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
KCNMA1-279ENST00000640182 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
KCNMA1-279ENST00000640182 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-279ENST00000640182 KIF3BO15066 747 aa16.97■□□□□ 0.31
KCNMA1-279ENST00000640182 STK26Q9P289 416 aa16.97■□□□□ 0.31
KCNMA1-279ENST00000640182 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-279ENST00000640182 AKNAQ7Z591 1439 aa16.97■□□□□ 0.31
KCNMA1-279ENST00000640182 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
KCNMA1-279ENST00000640182 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
KCNMA1-279ENST00000640182 SKAP1Q86WV1 359 aa16.95■□□□□ 0.3
KCNMA1-279ENST00000640182 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-279ENST00000640182 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
KCNMA1-279ENST00000640182 RALBP1Q15311 655 aa16.95■□□□□ 0.3
KCNMA1-279ENST00000640182 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
KCNMA1-279ENST00000640182 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
KCNMA1-279ENST00000640182 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
KCNMA1-279ENST00000640182 MSH5O43196 834 aa16.92■□□□□ 0.3
KCNMA1-279ENST00000640182 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
KCNMA1-279ENST00000640182 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-279ENST00000640182 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-279ENST00000640182 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
KCNMA1-279ENST00000640182 HSP90AA1P07900 732 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-279ENST00000640182 CRBNQ96SW2 442 aa16.9■□□□□ 0.3
KCNMA1-279ENST00000640182 TRAK1Q9UPV9 953 aa16.9■□□□□ 0.3
KCNMA1-279ENST00000640182 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
KCNMA1-279ENST00000640182 EFCAB2Q5VUJ9 269 aa16.89■□□□□ 0.29
KCNMA1-279ENST00000640182 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
KCNMA1-279ENST00000640182 RRP1P56182 461 aaKnown RBP16.88■□□□□ 0.29
KCNMA1-279ENST00000640182 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
KCNMA1-279ENST00000640182 ANKRD50Q9ULJ7 1429 aa16.88■□□□□ 0.29
KCNMA1-279ENST00000640182 MLECQ14165 292 aa16.88■□□□□ 0.29
KCNMA1-279ENST00000640182 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
KCNMA1-279ENST00000640182 IPO9Q96P70 1041 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-279ENST00000640182 SOX12O15370 315 aa16.87■□□□□ 0.29
KCNMA1-279ENST00000640182 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
KCNMA1-279ENST00000640182 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
KCNMA1-279ENST00000640182 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
KCNMA1-279ENST00000640182 PTPRGP23470 1445 aa16.86■□□□□ 0.29
KCNMA1-279ENST00000640182 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
KCNMA1-279ENST00000640182 APAF1O14727 1248 aa16.85■□□□□ 0.29
KCNMA1-279ENST00000640182 PDE4AP27815 886 aa16.84■□□□□ 0.29
KCNMA1-279ENST00000640182 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-279ENST00000640182 PNISRQ8TF01 805 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-279ENST00000640182 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
KCNMA1-279ENST00000640182 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.29
KCNMA1-279ENST00000640182 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
KCNMA1-279ENST00000640182 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
KCNMA1-279ENST00000640182 POGKQ9P215 609 aa16.82■□□□□ 0.28
KCNMA1-279ENST00000640182 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
KCNMA1-279ENST00000640182 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
KCNMA1-279ENST00000640182 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
KCNMA1-279ENST00000640182 SLKQ9H2G2 1235 aaPredicted RBP16.81■□□□□ 0.28
KCNMA1-279ENST00000640182 EPRSP07814 1512 aaKnown RBP16.81■□□□□ 0.28
KCNMA1-279ENST00000640182 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
KCNMA1-279ENST00000640182 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
KCNMA1-279ENST00000640182 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms