RNA–Protein interactions for RNA: ENST00000639498.1

KCNMA1-263, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-263ENST00000639498 CHMP4BQ9H444 224 aaKnown RBP15.57■□□□□ 0.08
KCNMA1-263ENST00000639498 SRPK2P78362 688 aaKnown RBP15.57■□□□□ 0.08
KCNMA1-263ENST00000639498 MORC1Q86VD1 984 aa15.57■□□□□ 0.08
KCNMA1-263ENST00000639498 U2SURPO15042 1029 aaKnown RBP15.56■□□□□ 0.08
KCNMA1-263ENST00000639498 KIF3BO15066 747 aa15.56■□□□□ 0.08
KCNMA1-263ENST00000639498 EIF5BO60841 1220 aaKnown RBP15.56■□□□□ 0.08
KCNMA1-263ENST00000639498 PTPRGP23470 1445 aa15.56■□□□□ 0.08
KCNMA1-263ENST00000639498 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
KCNMA1-263ENST00000639498 MLECQ14165 292 aa15.54■□□□□ 0.08
KCNMA1-263ENST00000639498 ERICH6BQ5W0A0 696 aa15.54■□□□□ 0.08
KCNMA1-263ENST00000639498 CFTRP13569 1480 aa15.54■□□□□ 0.08
KCNMA1-263ENST00000639498 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
KCNMA1-263ENST00000639498 EIF3AQ14152 1382 aaKnown RBP15.53■□□□□ 0.08
KCNMA1-263ENST00000639498 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
KCNMA1-263ENST00000639498 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
KCNMA1-263ENST00000639498 KIF21BO75037 1637 aa15.52■□□□□ 0.07
KCNMA1-263ENST00000639498 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
KCNMA1-263ENST00000639498 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
KCNMA1-263ENST00000639498 HDGFL2Q7Z4V5 671 aaPredicted RBP15.49■□□□□ 0.07
KCNMA1-263ENST00000639498 SAFB2Q14151 953 aaKnown RBP eCLIP15.49■□□□□ 0.07
KCNMA1-263ENST00000639498 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
KCNMA1-263ENST00000639498 ANP32EQ9BTT0 268 aa15.48■□□□□ 0.07
KCNMA1-263ENST00000639498 MYOM3Q5VTT5 1437 aa15.47■□□□□ 0.07
KCNMA1-263ENST00000639498 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
KCNMA1-263ENST00000639498 STK26Q9P289 416 aa15.47■□□□□ 0.07
KCNMA1-263ENST00000639498 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
KCNMA1-263ENST00000639498 RGS3P49796 1198 aa15.46■□□□□ 0.07
KCNMA1-263ENST00000639498 CASC1Q6TDU7 716 aa15.46■□□□□ 0.07
KCNMA1-263ENST00000639498 NLRP13Q86W25 1043 aa15.46■□□□□ 0.06
KCNMA1-263ENST00000639498 CUX1P39880 1505 aa15.45■□□□□ 0.06
KCNMA1-263ENST00000639498 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
KCNMA1-263ENST00000639498 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
KCNMA1-263ENST00000639498 LRRC9Q6ZRR7 1453 aa15.45■□□□□ 0.06
KCNMA1-263ENST00000639498 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
KCNMA1-263ENST00000639498 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
KCNMA1-263ENST00000639498 CASKIN1Q8WXD9 1431 aa15.44■□□□□ 0.06
KCNMA1-263ENST00000639498 A0A0G2JS52 829 aa15.44■□□□□ 0.06
KCNMA1-263ENST00000639498 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
KCNMA1-263ENST00000639498 GOLGA6L22H0YM25 854 aa15.43■□□□□ 0.06
KCNMA1-263ENST00000639498 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
KCNMA1-263ENST00000639498 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
KCNMA1-263ENST00000639498 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.06
KCNMA1-263ENST00000639498 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
KCNMA1-263ENST00000639498 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
KCNMA1-263ENST00000639498 ST20-MTHFSA0A0A6YYL1 179 aa15.4■□□□□ 0.06
KCNMA1-263ENST00000639498 UACAQ9BZF9 1416 aa15.4■□□□□ 0.06
KCNMA1-263ENST00000639498 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
KCNMA1-263ENST00000639498 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.05
KCNMA1-263ENST00000639498 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
KCNMA1-263ENST00000639498 TERF2IPQ9NYB0 399 aa15.39■□□□□ 0.05
KCNMA1-263ENST00000639498 KIF15Q9NS87 1388 aa15.39■□□□□ 0.05
KCNMA1-263ENST00000639498 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
KCNMA1-263ENST00000639498 CALD1Q05682 793 aaKnown RBP15.38■□□□□ 0.05
KCNMA1-263ENST00000639498 ARAP1Q96P48 1450 aa15.38■□□□□ 0.05
KCNMA1-263ENST00000639498 FYCO1Q9BQS8 1478 aa15.37■□□□□ 0.05
KCNMA1-263ENST00000639498 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
KCNMA1-263ENST00000639498 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
KCNMA1-263ENST00000639498 ARXQ96QS3 562 aa15.36■□□□□ 0.05
KCNMA1-263ENST00000639498 NOP58Q9Y2X3 529 aaKnown RBP15.35■□□□□ 0.05
KCNMA1-263ENST00000639498 NCOA2Q15596 1464 aa15.35■□□□□ 0.05
KCNMA1-263ENST00000639498 USP47Q96K76 1375 aa15.34■□□□□ 0.05
KCNMA1-263ENST00000639498 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
KCNMA1-263ENST00000639498 PRKRIP1Q9H875 184 aaPredicted RBP15.34■□□□□ 0.05
KCNMA1-263ENST00000639498 SOX12O15370 315 aa15.34■□□□□ 0.05
KCNMA1-263ENST00000639498 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
KCNMA1-263ENST00000639498 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
KCNMA1-263ENST00000639498 OSCARQ8IYS5 282 aa15.33■□□□□ 0.05
KCNMA1-263ENST00000639498 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.04
KCNMA1-263ENST00000639498 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
KCNMA1-263ENST00000639498 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
KCNMA1-263ENST00000639498 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
KCNMA1-263ENST00000639498 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
KCNMA1-263ENST00000639498 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
KCNMA1-263ENST00000639498 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
KCNMA1-263ENST00000639498 PANK3Q9H999 370 aa15.3■□□□□ 0.04
KCNMA1-263ENST00000639498 TRAK1Q9UPV9 953 aa15.3■□□□□ 0.04
KCNMA1-263ENST00000639498 EID1Q9Y6B2 187 aa15.3■□□□□ 0.04
KCNMA1-263ENST00000639498 NESP48681 1621 aa15.29■□□□□ 0.04
KCNMA1-263ENST00000639498 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
KCNMA1-263ENST00000639498 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
KCNMA1-263ENST00000639498 ANKRD50Q9ULJ7 1429 aa15.29■□□□□ 0.04
KCNMA1-263ENST00000639498 MRC2Q9UBG0 1479 aa15.28■□□□□ 0.04
KCNMA1-263ENST00000639498 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
KCNMA1-263ENST00000639498 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
KCNMA1-263ENST00000639498 CC2D2AQ9P2K1 1620 aa15.28■□□□□ 0.04
KCNMA1-263ENST00000639498 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.04
KCNMA1-263ENST00000639498 IFT140Q96RY7 1462 aa15.27■□□□□ 0.04
KCNMA1-263ENST00000639498 RWDD1Q9H446 243 aaPredicted RBP15.27■□□□□ 0.03
KCNMA1-263ENST00000639498 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
KCNMA1-263ENST00000639498 TRIM44Q96DX7 344 aaPredicted RBP15.25■□□□□ 0.03
KCNMA1-263ENST00000639498 ZBED9Q6R2W3 1325 aa15.24■□□□□ 0.03
KCNMA1-263ENST00000639498 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
KCNMA1-263ENST00000639498 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
KCNMA1-263ENST00000639498 EVC2Q86UK5 1308 aa15.23■□□□□ 0.03
KCNMA1-263ENST00000639498 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
KCNMA1-263ENST00000639498 PMFBP1Q8TBY8 1022 aa15.22■□□□□ 0.03
KCNMA1-263ENST00000639498 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
KCNMA1-263ENST00000639498 DNMBPQ6XZF7 1577 aa15.22■□□□□ 0.03
KCNMA1-263ENST00000639498 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
KCNMA1-263ENST00000639498 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms