RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 U2SURPO15042 1029 aaKnown RBP18.02■□□□□ 0.47
SCARB2-215ENST00000639145 CFTRP13569 1480 aa18.01■□□□□ 0.47
SCARB2-215ENST00000639145 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
SCARB2-215ENST00000639145 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
SCARB2-215ENST00000639145 RSPH4AQ5TD94 716 aa18■□□□□ 0.47
SCARB2-215ENST00000639145 ANP32AP39687 249 aaKnown RBP17.99■□□□□ 0.47
SCARB2-215ENST00000639145 NUDCQ9Y266 331 aa17.98■□□□□ 0.47
SCARB2-215ENST00000639145 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
SCARB2-215ENST00000639145 MAPK8IP3Q9UPT6 1336 aa17.97■□□□□ 0.47
SCARB2-215ENST00000639145 TIMELESSQ9UNS1 1208 aa17.96■□□□□ 0.47
SCARB2-215ENST00000639145 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
SCARB2-215ENST00000639145 L3MBTL2Q969R5 705 aa17.94■□□□□ 0.46
SCARB2-215ENST00000639145 CUX1P39880 1505 aa17.94■□□□□ 0.46
SCARB2-215ENST00000639145 HSP90AA1P07900 732 aaKnown RBP17.94■□□□□ 0.46
SCARB2-215ENST00000639145 UPF2Q9HAU5 1272 aaKnown RBP17.92■□□□□ 0.46
SCARB2-215ENST00000639145 PAK3O75914 559 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-215ENST00000639145 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
SCARB2-215ENST00000639145 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
SCARB2-215ENST00000639145 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
SCARB2-215ENST00000639145 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
SCARB2-215ENST00000639145 ROCK2O75116 1388 aaKnown RBP17.88■□□□□ 0.45
SCARB2-215ENST00000639145 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
SCARB2-215ENST00000639145 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
SCARB2-215ENST00000639145 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
SCARB2-215ENST00000639145 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
SCARB2-215ENST00000639145 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
SCARB2-215ENST00000639145 KIF21BO75037 1637 aa17.84■□□□□ 0.45
SCARB2-215ENST00000639145 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
SCARB2-215ENST00000639145 TOPBP1Q92547 1522 aa17.83■□□□□ 0.44
SCARB2-215ENST00000639145 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.44
SCARB2-215ENST00000639145 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
SCARB2-215ENST00000639145 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
SCARB2-215ENST00000639145 FTSJ3Q8IY81 847 aaKnown RBP17.8■□□□□ 0.44
SCARB2-215ENST00000639145 DHX57Q6P158 1386 aaKnown RBP17.77■□□□□ 0.44
SCARB2-215ENST00000639145 AFAP1Q8N556 730 aa17.77■□□□□ 0.43
SCARB2-215ENST00000639145 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
SCARB2-215ENST00000639145 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
SCARB2-215ENST00000639145 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
SCARB2-215ENST00000639145 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
SCARB2-215ENST00000639145 U2AF1L5P0DN76 240 aaPredicted RBP17.74■□□□□ 0.43
SCARB2-215ENST00000639145 U2AF1Q01081 240 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCARB2-215ENST00000639145 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
SCARB2-215ENST00000639145 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
SCARB2-215ENST00000639145 CCDC144AA2RUR9 1427 aa17.72■□□□□ 0.43
SCARB2-215ENST00000639145 NPHP1O15259 732 aa17.72■□□□□ 0.43
SCARB2-215ENST00000639145 ST20-MTHFSA0A0A6YYL1 179 aa17.71■□□□□ 0.43
SCARB2-215ENST00000639145 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
SCARB2-215ENST00000639145 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
SCARB2-215ENST00000639145 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
SCARB2-215ENST00000639145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
SCARB2-215ENST00000639145 TERF2IPQ9NYB0 399 aa17.68■□□□□ 0.42
SCARB2-215ENST00000639145 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
SCARB2-215ENST00000639145 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
SCARB2-215ENST00000639145 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
SCARB2-215ENST00000639145 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
SCARB2-215ENST00000639145 KIF15Q9NS87 1388 aa17.66■□□□□ 0.42
SCARB2-215ENST00000639145 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.42
SCARB2-215ENST00000639145 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
SCARB2-215ENST00000639145 EIF3AQ14152 1382 aaKnown RBP17.64■□□□□ 0.41
SCARB2-215ENST00000639145 CCDC9Q9Y3X0 531 aaKnown RBP17.64■□□□□ 0.41
SCARB2-215ENST00000639145 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-215ENST00000639145 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
SCARB2-215ENST00000639145 RGS3P49796 1198 aa17.63■□□□□ 0.41
SCARB2-215ENST00000639145 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-215ENST00000639145 FGD6Q6ZV73 1430 aa17.63■□□□□ 0.41
SCARB2-215ENST00000639145 LRRC9Q6ZRR7 1453 aa17.61■□□□□ 0.41
SCARB2-215ENST00000639145 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-215ENST00000639145 CCER2I3L3R5 266 aa17.59■□□□□ 0.41
SCARB2-215ENST00000639145 URB2Q14146 1524 aaKnown RBP17.59■□□□□ 0.41
SCARB2-215ENST00000639145 AMPHP49418 695 aa17.58■□□□□ 0.41
SCARB2-215ENST00000639145 OS9Q13438 667 aaPredicted RBP17.58■□□□□ 0.41
SCARB2-215ENST00000639145 RALBP1Q15311 655 aa17.57■□□□□ 0.4
SCARB2-215ENST00000639145 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
SCARB2-215ENST00000639145 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
SCARB2-215ENST00000639145 PANK3Q9H999 370 aa17.56■□□□□ 0.4
SCARB2-215ENST00000639145 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
SCARB2-215ENST00000639145 B4GALNT3Q6L9W6 998 aa17.55■□□□□ 0.4
SCARB2-215ENST00000639145 NCOA2Q15596 1464 aa17.55■□□□□ 0.4
SCARB2-215ENST00000639145 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
SCARB2-215ENST00000639145 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
SCARB2-215ENST00000639145 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
SCARB2-215ENST00000639145 MS4A1P11836 297 aa17.51■□□□□ 0.39
SCARB2-215ENST00000639145 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
SCARB2-215ENST00000639145 UACAQ9BZF9 1416 aa17.51■□□□□ 0.39
SCARB2-215ENST00000639145 NBR1Q14596 966 aa17.51■□□□□ 0.39
SCARB2-215ENST00000639145 ARHGAP5Q13017 1502 aa17.51■□□□□ 0.39
SCARB2-215ENST00000639145 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
SCARB2-215ENST00000639145 CDK13Q14004 1512 aaKnown RBP17.5■□□□□ 0.39
SCARB2-215ENST00000639145 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
SCARB2-215ENST00000639145 PPP4R2Q9NY27 417 aa17.49■□□□□ 0.39
SCARB2-215ENST00000639145 APBB1O00213 710 aa17.49■□□□□ 0.39
SCARB2-215ENST00000639145 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
SCARB2-215ENST00000639145 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
SCARB2-215ENST00000639145 USP47Q96K76 1375 aa17.48■□□□□ 0.39
SCARB2-215ENST00000639145 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
SCARB2-215ENST00000639145 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-215ENST00000639145 RRP7AQ9Y3A4 280 aaKnown RBP17.47■□□□□ 0.39
SCARB2-215ENST00000639145 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
SCARB2-215ENST00000639145 ABCA10Q8WWZ4 1543 aa17.46■□□□□ 0.38
SCARB2-215ENST00000639145 FYCO1Q9BQS8 1478 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms