RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 PKD2Q13563 968 aa11.09□□□□□ -0.63
SCARB2-211ENST00000638603 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
SCARB2-211ENST00000638603 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
SCARB2-211ENST00000638603 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
SCARB2-211ENST00000638603 CCDC136Q96JN2 1154 aa11.09□□□□□ -0.63
SCARB2-211ENST00000638603 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-211ENST00000638603 SAMD9Q5K651 1589 aa11.09□□□□□ -0.63
SCARB2-211ENST00000638603 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
SCARB2-211ENST00000638603 CHMP7Q8WUX9 453 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-211ENST00000638603 LAMC3Q9Y6N6 1575 aa11.08□□□□□ -0.64
SCARB2-211ENST00000638603 HECW1Q76N89 1606 aa11.07□□□□□ -0.64
SCARB2-211ENST00000638603 ANKRD30BQ9BXX2 1392 aa11.07□□□□□ -0.64
SCARB2-211ENST00000638603 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
SCARB2-211ENST00000638603 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
SCARB2-211ENST00000638603 THOC2Q8NI27 1593 aaKnown RBP11.06□□□□□ -0.64
SCARB2-211ENST00000638603 NCOA1Q15788 1441 aa11.06□□□□□ -0.64
SCARB2-211ENST00000638603 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
SCARB2-211ENST00000638603 DAPK1P53355 1430 aa11.06□□□□□ -0.64
SCARB2-211ENST00000638603 ABCA5Q8WWZ7 1642 aa11.05□□□□□ -0.64
SCARB2-211ENST00000638603 TCOF1Q13428 1488 aaKnown RBP11.05□□□□□ -0.64
SCARB2-211ENST00000638603 KDM6BO15054 1643 aa11.04□□□□□ -0.64
SCARB2-211ENST00000638603 IQGAP2Q13576 1575 aa11.04□□□□□ -0.64
SCARB2-211ENST00000638603 TSPY4P0CV99 314 aa11.04□□□□□ -0.64
SCARB2-211ENST00000638603 TSPY10P0CW01 314 aa11.04□□□□□ -0.64
SCARB2-211ENST00000638603 ABCC5O15440 1437 aa11.04□□□□□ -0.64
SCARB2-211ENST00000638603 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
SCARB2-211ENST00000638603 USP47Q96K76 1375 aa11.03□□□□□ -0.64
SCARB2-211ENST00000638603 AKNAQ7Z591 1439 aa11.03□□□□□ -0.64
SCARB2-211ENST00000638603 DENND4BO75064 1496 aaPredicted RBP11.03□□□□□ -0.64
SCARB2-211ENST00000638603 PLEKHD1A6NEE1 506 aa11.03□□□□□ -0.64
SCARB2-211ENST00000638603 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.64
SCARB2-211ENST00000638603 NBR1Q14596 966 aa11.02□□□□□ -0.64
SCARB2-211ENST00000638603 LRRIQ1Q96JM4 1722 aa11.02□□□□□ -0.64
SCARB2-211ENST00000638603 DCAF11Q8TEB1 546 aa11.02□□□□□ -0.65
SCARB2-211ENST00000638603 NUDCQ9Y266 331 aa11.02□□□□□ -0.65
SCARB2-211ENST00000638603 NUP155O75694 1391 aa11.01□□□□□ -0.65
SCARB2-211ENST00000638603 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
SCARB2-211ENST00000638603 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
SCARB2-211ENST00000638603 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
SCARB2-211ENST00000638603 RGL3Q3MIN7 710 aa11□□□□□ -0.65
SCARB2-211ENST00000638603 ARHGEF11O15085 1522 aa11□□□□□ -0.65
SCARB2-211ENST00000638603 ANKRD30AQ9BXX3 1397 aa11□□□□□ -0.65
SCARB2-211ENST00000638603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
SCARB2-211ENST00000638603 ST20-MTHFSA0A0A6YYL1 179 aa10.99□□□□□ -0.65
SCARB2-211ENST00000638603 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
SCARB2-211ENST00000638603 GCC2Q8IWJ2 1684 aa10.97□□□□□ -0.65
SCARB2-211ENST00000638603 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
SCARB2-211ENST00000638603 WDR62O43379 1518 aa10.97□□□□□ -0.65
SCARB2-211ENST00000638603 ZNF608Q9ULD9 1512 aaPredicted RBP10.96□□□□□ -0.65
SCARB2-211ENST00000638603 HNRNPMP52272 730 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCARB2-211ENST00000638603 KIF21AQ7Z4S6 1674 aa10.96□□□□□ -0.66
SCARB2-211ENST00000638603 JPH4Q96JJ6 628 aa10.95□□□□□ -0.66
SCARB2-211ENST00000638603 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
SCARB2-211ENST00000638603 TEX14Q8IWB6 1497 aa10.95□□□□□ -0.66
SCARB2-211ENST00000638603 ANKRD50Q9ULJ7 1429 aa10.95□□□□□ -0.66
SCARB2-211ENST00000638603 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-211ENST00000638603 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
SCARB2-211ENST00000638603 NUP153P49790 1475 aaKnown RBP10.94□□□□□ -0.66
SCARB2-211ENST00000638603 TROQ12816 1431 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-211ENST00000638603 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
SCARB2-211ENST00000638603 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-211ENST00000638603 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
SCARB2-211ENST00000638603 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
SCARB2-211ENST00000638603 SPATA31E1Q6ZUB1 1445 aa10.93□□□□□ -0.66
SCARB2-211ENST00000638603 CAMSAP2Q08AD1 1489 aa10.93□□□□□ -0.66
SCARB2-211ENST00000638603 CC2D1BQ5T0F9 858 aaKnown RBP10.93□□□□□ -0.66
SCARB2-211ENST00000638603 ROCK2O75116 1388 aaKnown RBP10.93□□□□□ -0.66
SCARB2-211ENST00000638603 PLB1Q6P1J6 1458 aa10.93□□□□□ -0.66
SCARB2-211ENST00000638603 ADAMTS12P58397 1594 aa10.93□□□□□ -0.66
SCARB2-211ENST00000638603 SMG6Q86US8 1419 aaKnown RBP10.92□□□□□ -0.66
SCARB2-211ENST00000638603 KIF15Q9NS87 1388 aa10.92□□□□□ -0.66
SCARB2-211ENST00000638603 CARMIL2Q6F5E8 1435 aa10.92□□□□□ -0.66
SCARB2-211ENST00000638603 RALBP1Q15311 655 aa10.91□□□□□ -0.66
SCARB2-211ENST00000638603 DHX29Q7Z478 1369 aaKnown RBP10.91□□□□□ -0.66
SCARB2-211ENST00000638603 PZPP20742 1482 aa10.91□□□□□ -0.66
SCARB2-211ENST00000638603 DEKP35659 375 aaKnown RBP10.91□□□□□ -0.66
SCARB2-211ENST00000638603 MYBBP1AQ9BQG0 1328 aaKnown RBP10.91□□□□□ -0.66
SCARB2-211ENST00000638603 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
SCARB2-211ENST00000638603 DNMT1P26358 1616 aaKnown RBP10.9□□□□□ -0.66
SCARB2-211ENST00000638603 ARID4BQ4LE39 1312 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-211ENST00000638603 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-211ENST00000638603 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
SCARB2-211ENST00000638603 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
SCARB2-211ENST00000638603 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
SCARB2-211ENST00000638603 DISP1Q96F81 1524 aa10.89□□□□□ -0.67
SCARB2-211ENST00000638603 ERCC6Q03468 1493 aa10.89□□□□□ -0.67
SCARB2-211ENST00000638603 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
SCARB2-211ENST00000638603 EXOC6Q8TAG9 804 aa10.89□□□□□ -0.67
SCARB2-211ENST00000638603 GRIN2AQ12879 1464 aa10.88□□□□□ -0.67
SCARB2-211ENST00000638603 NLRP13Q86W25 1043 aa10.88□□□□□ -0.67
SCARB2-211ENST00000638603 KIAA0556O60303 1618 aa10.88□□□□□ -0.67
SCARB2-211ENST00000638603 KTN1Q86UP2 1357 aaKnown RBP10.87□□□□□ -0.67
SCARB2-211ENST00000638603 RAPGEF6Q8TEU7 1601 aa10.87□□□□□ -0.67
SCARB2-211ENST00000638603 RRP1P56182 461 aaKnown RBP10.87□□□□□ -0.67
SCARB2-211ENST00000638603 IPO9Q96P70 1041 aaKnown RBP10.87□□□□□ -0.67
SCARB2-211ENST00000638603 C9orf84Q5VXU9 1444 aa10.87□□□□□ -0.67
SCARB2-211ENST00000638603 NBPF1Q3BBV0 1214 aa10.86□□□□□ -0.67
SCARB2-211ENST00000638603 PLIN1O60240 522 aa10.85□□□□□ -0.67
SCARB2-211ENST00000638603 CDCA7LQ96GN5 454 aa10.84□□□□□ -0.67
SCARB2-211ENST00000638603 BRD4O60885 1362 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms