RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 ARHGEF11O15085 1522 aa9.04□□□□□ -0.96
SCARB2-207ENST00000638295 WDR97A6NE52 1622 aa9.04□□□□□ -0.96
SCARB2-207ENST00000638295 SCAPERQ9BY12 1400 aa9.03□□□□□ -0.96
SCARB2-207ENST00000638295 THEMISQ8N1K5 641 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-207ENST00000638295 PHF23Q9BUL5 403 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-207ENST00000638295 ASXL2Q76L83 1435 aa9.03□□□□□ -0.96
SCARB2-207ENST00000638295 ZBTB7CA1YPR0 619 aa9.03□□□□□ -0.96
SCARB2-207ENST00000638295 ZNF316A6NFI3 1004 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-207ENST00000638295 CANXP27824 592 aaKnown RBP9.02□□□□□ -0.97
SCARB2-207ENST00000638295 NPM2Q86SE8 214 aaKnown RBP9.02□□□□□ -0.97
SCARB2-207ENST00000638295 AKNAQ7Z591 1439 aa9.02□□□□□ -0.97
SCARB2-207ENST00000638295 PLEKHH2Q8IVE3 1493 aa9.01□□□□□ -0.97
SCARB2-207ENST00000638295 EFCAB5A4FU69 1503 aa9□□□□□ -0.97
SCARB2-207ENST00000638295 NUP160Q12769 1436 aa9□□□□□ -0.97
SCARB2-207ENST00000638295 DENND4BO75064 1496 aaPredicted RBP9□□□□□ -0.97
SCARB2-207ENST00000638295 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.99□□□□□ -0.97
SCARB2-207ENST00000638295 MEX3CQ5U5Q3 659 aaKnown RBP8.99□□□□□ -0.97
SCARB2-207ENST00000638295 ANKLE2Q86XL3 938 aa8.99□□□□□ -0.97
SCARB2-207ENST00000638295 NUP155O75694 1391 aa8.99□□□□□ -0.97
SCARB2-207ENST00000638295 PRXQ9BXM0 1461 aa8.99□□□□□ -0.97
SCARB2-207ENST00000638295 TROQ12816 1431 aaPredicted RBP8.99□□□□□ -0.97
SCARB2-207ENST00000638295 ADAMTS12P58397 1594 aa8.98□□□□□ -0.97
SCARB2-207ENST00000638295 EIF4G2P78344 907 aaKnown RBP eCLIP8.97□□□□□ -0.97
SCARB2-207ENST00000638295 BIVM-ERCC5R4GMW8 1640 aa8.97□□□□□ -0.97
SCARB2-207ENST00000638295 ATF3P18847 181 aa8.96□□□□□ -0.98
SCARB2-207ENST00000638295 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
SCARB2-207ENST00000638295 CASKIN1Q8WXD9 1431 aa8.95□□□□□ -0.98
SCARB2-207ENST00000638295 ABCC2Q92887 1545 aa8.95□□□□□ -0.98
SCARB2-207ENST00000638295 ADGRL1O94910 1474 aa8.95□□□□□ -0.98
SCARB2-207ENST00000638295 WDR7Q9Y4E6 1490 aa8.95□□□□□ -0.98
SCARB2-207ENST00000638295 TXNDC2Q86VQ3 553 aa8.94□□□□□ -0.98
SCARB2-207ENST00000638295 MYOM3Q5VTT5 1437 aa8.94□□□□□ -0.98
SCARB2-207ENST00000638295 KANK4Q5T7N3 995 aaPredicted RBP8.94□□□□□ -0.98
SCARB2-207ENST00000638295 WDR43Q15061 677 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCARB2-207ENST00000638295 STK26Q9P289 416 aa8.94□□□□□ -0.98
SCARB2-207ENST00000638295 PKD2Q13563 968 aa8.93□□□□□ -0.98
SCARB2-207ENST00000638295 PROSER2Q86WR7 435 aaPredicted RBP8.93□□□□□ -0.98
SCARB2-207ENST00000638295 CEP170Q5SW79 1584 aa8.93□□□□□ -0.98
SCARB2-207ENST00000638295 CFAP53Q96M91 514 aa8.93□□□□□ -0.98
SCARB2-207ENST00000638295 VGFO15240 615 aaPredicted RBP8.93□□□□□ -0.98
SCARB2-207ENST00000638295 TMC1Q8TDI8 760 aa8.93□□□□□ -0.98
SCARB2-207ENST00000638295 PPP6R1Q9UPN7 881 aa8.93□□□□□ -0.98
SCARB2-207ENST00000638295 FOXD1Q16676 465 aa8.92□□□□□ -0.98
SCARB2-207ENST00000638295 HECW1Q76N89 1606 aa8.92□□□□□ -0.98
SCARB2-207ENST00000638295 FANCAO15360 1455 aa8.92□□□□□ -0.98
SCARB2-207ENST00000638295 PIP4K2BP78356 416 aa8.92□□□□□ -0.98
SCARB2-207ENST00000638295 KIF15Q9NS87 1388 aa8.9□□□□□ -0.98
SCARB2-207ENST00000638295 TIMELESSQ9UNS1 1208 aa8.9□□□□□ -0.98
SCARB2-207ENST00000638295 TARBP1Q13395 1621 aaKnown RBP8.9□□□□□ -0.99
SCARB2-207ENST00000638295 FYCO1Q9BQS8 1478 aa8.89□□□□□ -0.99
SCARB2-207ENST00000638295 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
SCARB2-207ENST00000638295 NUTM2DQ5VT03 806 aaPredicted RBP8.89□□□□□ -0.99
SCARB2-207ENST00000638295 ZNF644Q9H582 1327 aaPredicted RBP8.89□□□□□ -0.99
SCARB2-207ENST00000638295 KIF21BO75037 1637 aa8.89□□□□□ -0.99
SCARB2-207ENST00000638295 CARD11Q9BXL7 1154 aa8.89□□□□□ -0.99
SCARB2-207ENST00000638295 TOM1O60784 492 aa8.88□□□□□ -0.99
SCARB2-207ENST00000638295 CEBPAP49715 358 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-207ENST00000638295 PBRM1Q86U86 1689 aa8.88□□□□□ -0.99
SCARB2-207ENST00000638295 SRPK2P78362 688 aaKnown RBP8.88□□□□□ -0.99
SCARB2-207ENST00000638295 SAFB2Q14151 953 aaKnown RBP eCLIP8.88□□□□□ -0.99
SCARB2-207ENST00000638295 ARAP1Q96P48 1450 aa8.88□□□□□ -0.99
SCARB2-207ENST00000638295 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-207ENST00000638295 UBAP1LF5GYI3 381 aa8.87□□□□□ -0.99
SCARB2-207ENST00000638295 SLC52A1Q9NWF4 448 aa8.87□□□□□ -0.99
SCARB2-207ENST00000638295 KNSTRNQ9Y448 316 aa8.87□□□□□ -0.99
SCARB2-207ENST00000638295 DCAF11Q8TEB1 546 aa8.87□□□□□ -0.99
SCARB2-207ENST00000638295 EPRSP07814 1512 aaKnown RBP8.87□□□□□ -0.99
SCARB2-207ENST00000638295 NGDNQ8NEJ9 315 aaKnown RBP8.87□□□□□ -0.99
SCARB2-207ENST00000638295 CHD1O14646 1710 aa8.87□□□□□ -0.99
SCARB2-207ENST00000638295 NUDCQ9Y266 331 aa8.86□□□□□ -0.99
SCARB2-207ENST00000638295 UGGT2Q9NYU1 1516 aa8.86□□□□□ -0.99
SCARB2-207ENST00000638295 ABCA5Q8WWZ7 1642 aa8.85□□□□□ -0.99
SCARB2-207ENST00000638295 HSPA2P54652 639 aa8.84□□□□□ -0.99
SCARB2-207ENST00000638295 PNNQ9H307 717 aaKnown RBP8.84□□□□□ -0.99
SCARB2-207ENST00000638295 ATP10BO94823 1461 aa8.84□□□□□ -0.99
SCARB2-207ENST00000638295 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
SCARB2-207ENST00000638295 KIF14Q15058 1648 aa8.84□□□□□ -0.99
SCARB2-207ENST00000638295 CDK13Q14004 1512 aaKnown RBP8.83□□□□□ -1
SCARB2-207ENST00000638295 TMF1P82094 1093 aa8.83□□□□□ -1
SCARB2-207ENST00000638295 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
SCARB2-207ENST00000638295 NCOA2Q15596 1464 aa8.83□□□□□ -1
SCARB2-207ENST00000638295 DCAF8L1A6NGE4 600 aa8.82□□□□□ -1
SCARB2-207ENST00000638295 PLCH2O75038 1416 aa8.82□□□□□ -1
SCARB2-207ENST00000638295 EHBP1L1Q8N3D4 1523 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 RIMBP3CA6NJZ7 1639 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 RIMBP3BA6NNM3 1639 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 RIMBP3Q9UFD9 1639 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 MPHOSPH9Q99550 1183 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 SETD5Q9C0A6 1442 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 NUTM2FA1L443 756 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 ZNF518AQ6AHZ1 1483 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 KIAA0556O60303 1618 aa8.81□□□□□ -1
SCARB2-207ENST00000638295 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
SCARB2-207ENST00000638295 HDGFL2Q7Z4V5 671 aaPredicted RBP8.81□□□□□ -1
SCARB2-207ENST00000638295 ABCC10Q5T3U5 1492 aa8.8□□□□□ -1
SCARB2-207ENST00000638295 MRS2Q9HD23 443 aa8.8□□□□□ -1
SCARB2-207ENST00000638295 CCDC144AA2RUR9 1427 aa8.8□□□□□ -1
SCARB2-207ENST00000638295 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
SCARB2-207ENST00000638295 C9orf84Q5VXU9 1444 aa8.8□□□□□ -1
SCARB2-207ENST00000638295 UHRF1BP1Q6BDS2 1440 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms