RNA–Protein interactions for RNA: ENST00000634256.1

LINC01646-202, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 5 BASIC

Gene LINC01646, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-202ENST00000634256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
LINC01646-202ENST00000634256 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
LINC01646-202ENST00000634256 RICTORQ6R327 1708 aa11.77□□□□□ -0.53
LINC01646-202ENST00000634256 CFAP74Q9C0B2 1584 aa11.74□□□□□ -0.53
LINC01646-202ENST00000634256 ATP10AO60312 1499 aa11.73□□□□□ -0.53
LINC01646-202ENST00000634256 C9orf84Q5VXU9 1444 aa11.72□□□□□ -0.53
LINC01646-202ENST00000634256 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
LINC01646-202ENST00000634256 SETD1BQ9UPS6 1966 aaKnown RBP11.72□□□□□ -0.53
LINC01646-202ENST00000634256 SIGLEC1Q9BZZ2 1709 aa11.72□□□□□ -0.53
LINC01646-202ENST00000634256 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.53
LINC01646-202ENST00000634256 NCOA1Q15788 1441 aa11.71□□□□□ -0.53
LINC01646-202ENST00000634256 MED1Q15648 1581 aaPredicted RBP11.71□□□□□ -0.54
LINC01646-202ENST00000634256 HECW1Q76N89 1606 aa11.7□□□□□ -0.54
LINC01646-202ENST00000634256 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
LINC01646-202ENST00000634256 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
LINC01646-202ENST00000634256 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
LINC01646-202ENST00000634256 HSPA1LP34931 641 aa11.67□□□□□ -0.54
LINC01646-202ENST00000634256 ESF1Q9H501 851 aaKnown RBP11.67□□□□□ -0.54
LINC01646-202ENST00000634256 ZNF335Q9H4Z2 1342 aaPredicted RBP11.66□□□□□ -0.54
LINC01646-202ENST00000634256 RAPGEF6Q8TEU7 1601 aa11.65□□□□□ -0.54
LINC01646-202ENST00000634256 TOM1O60784 492 aa11.64□□□□□ -0.55
LINC01646-202ENST00000634256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01646-202ENST00000634256 SCAF1Q9H7N4 1312 aaKnown RBP11.63□□□□□ -0.55
LINC01646-202ENST00000634256 PKD2Q13563 968 aa11.63□□□□□ -0.55
LINC01646-202ENST00000634256 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
LINC01646-202ENST00000634256 PLCH2O75038 1416 aa11.61□□□□□ -0.55
LINC01646-202ENST00000634256 PIP4K2BP78356 416 aa11.61□□□□□ -0.55
LINC01646-202ENST00000634256 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
LINC01646-202ENST00000634256 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
LINC01646-202ENST00000634256 EFCAB2Q5VUJ9 269 aa11.6□□□□□ -0.55
LINC01646-202ENST00000634256 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
LINC01646-202ENST00000634256 PRXQ9BXM0 1461 aa11.59□□□□□ -0.55
LINC01646-202ENST00000634256 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
LINC01646-202ENST00000634256 NPATQ14207 1427 aa11.59□□□□□ -0.55
LINC01646-202ENST00000634256 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.56
LINC01646-202ENST00000634256 C3P01024 1663 aa11.58□□□□□ -0.56
LINC01646-202ENST00000634256 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
LINC01646-202ENST00000634256 AGLP35573 1532 aa11.57□□□□□ -0.56
LINC01646-202ENST00000634256 PPP6R1Q9UPN7 881 aa11.57□□□□□ -0.56
LINC01646-202ENST00000634256 REREQ9P2R6 1566 aa11.57□□□□□ -0.56
LINC01646-202ENST00000634256 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
LINC01646-202ENST00000634256 AFAP1Q8N556 730 aa11.54□□□□□ -0.56
LINC01646-202ENST00000634256 TCOF1Q13428 1488 aaKnown RBP11.53□□□□□ -0.56
LINC01646-202ENST00000634256 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
LINC01646-202ENST00000634256 CPS1P31327 1500 aa11.52□□□□□ -0.57
LINC01646-202ENST00000634256 KDM5CP41229 1560 aa11.52□□□□□ -0.57
LINC01646-202ENST00000634256 DIP2CQ9Y2E4 1556 aa11.51□□□□□ -0.57
LINC01646-202ENST00000634256 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
LINC01646-202ENST00000634256 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
LINC01646-202ENST00000634256 RGS17Q9UGC6 210 aaPredicted RBP11.48□□□□□ -0.57
LINC01646-202ENST00000634256 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
LINC01646-202ENST00000634256 SHANK2Q9UPX8 1470 aa11.46□□□□□ -0.57
LINC01646-202ENST00000634256 MROH2AA6NES4 1674 aa11.46□□□□□ -0.58
LINC01646-202ENST00000634256 ZNF142P52746 1687 aaPredicted RBP11.45□□□□□ -0.58
LINC01646-202ENST00000634256 ABCA6Q8N139 1617 aa11.45□□□□□ -0.58
LINC01646-202ENST00000634256 CEP170BQ9Y4F5 1589 aaPredicted RBP11.44□□□□□ -0.58
LINC01646-202ENST00000634256 ARHGAP5Q13017 1502 aa11.44□□□□□ -0.58
LINC01646-202ENST00000634256 MYO5CQ9NQX4 1742 aa11.43□□□□□ -0.58
LINC01646-202ENST00000634256 MYO3AQ8NEV4 1616 aa11.42□□□□□ -0.58
LINC01646-202ENST00000634256 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
LINC01646-202ENST00000634256 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
LINC01646-202ENST00000634256 FOXD1Q16676 465 aa11.42□□□□□ -0.58
LINC01646-202ENST00000634256 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.58
LINC01646-202ENST00000634256 POTEAQ6S8J7 498 aa11.4□□□□□ -0.58
LINC01646-202ENST00000634256 ANKLE2Q86XL3 938 aa11.39□□□□□ -0.59
LINC01646-202ENST00000634256 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
LINC01646-202ENST00000634256 ALKQ9UM73 1620 aa11.38□□□□□ -0.59
LINC01646-202ENST00000634256 CLIP1P30622 1438 aa11.38□□□□□ -0.59
LINC01646-202ENST00000634256 KIF14Q15058 1648 aa11.38□□□□□ -0.59
LINC01646-202ENST00000634256 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
LINC01646-202ENST00000634256 TROQ12816 1431 aaPredicted RBP11.37□□□□□ -0.59
LINC01646-202ENST00000634256 ATP1B4Q9UN42 357 aaPredicted RBP11.36□□□□□ -0.59
LINC01646-202ENST00000634256 ABCC1P33527 1531 aa11.35□□□□□ -0.59
LINC01646-202ENST00000634256 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
LINC01646-202ENST00000634256 VWDEQ8N2E2 1590 aa11.35□□□□□ -0.59
LINC01646-202ENST00000634256 KIDINS220Q9ULH0 1771 aa11.34□□□□□ -0.59
LINC01646-202ENST00000634256 NEURL4Q96JN8 1562 aa11.34□□□□□ -0.59
LINC01646-202ENST00000634256 GGT6Q6P531 493 aa11.34□□□□□ -0.59
LINC01646-202ENST00000634256 POTEDQ86YR6 584 aa11.34□□□□□ -0.59
LINC01646-202ENST00000634256 SPAG9O60271 1321 aaKnown RBP11.34□□□□□ -0.59
LINC01646-202ENST00000634256 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
LINC01646-202ENST00000634256 NPHP4O75161 1426 aaPredicted RBP11.33□□□□□ -0.6
LINC01646-202ENST00000634256 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
LINC01646-202ENST00000634256 CLTCQ00610 1675 aaKnown RBP11.32□□□□□ -0.6
LINC01646-202ENST00000634256 FMN1Q68DA7 1419 aa11.32□□□□□ -0.6
LINC01646-202ENST00000634256 MED14O60244 1454 aa11.32□□□□□ -0.6
LINC01646-202ENST00000634256 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
LINC01646-202ENST00000634256 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC01646-202ENST00000634256 POLR1AO95602 1720 aaPredicted RBP11.31□□□□□ -0.6
LINC01646-202ENST00000634256 TNRQ92752 1358 aa11.3□□□□□ -0.6
LINC01646-202ENST00000634256 A2MP01023 1474 aa11.3□□□□□ -0.6
LINC01646-202ENST00000634256 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
LINC01646-202ENST00000634256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01646-202ENST00000634256 SAMD9LQ8IVG5 1584 aa11.28□□□□□ -0.6
LINC01646-202ENST00000634256 FAM135BQ49AJ0 1406 aa11.28□□□□□ -0.6
LINC01646-202ENST00000634256 SYNMO15061 1565 aa11.28□□□□□ -0.6
LINC01646-202ENST00000634256 CDC42BPBQ9Y5S2 1711 aa11.27□□□□□ -0.61
LINC01646-202ENST00000634256 FAM135AQ9P2D6 1515 aa11.27□□□□□ -0.61
LINC01646-202ENST00000634256 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
LINC01646-202ENST00000634256 DEPDC5O75140 1603 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms