RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 RAPGEF6Q8TEU7 1601 aa25.01■■□□□ 1.59
CCNL1-226ENST00000631619 GRIN2AQ12879 1464 aa25■■□□□ 1.59
CCNL1-226ENST00000631619 ROCK1Q13464 1354 aa25■■□□□ 1.59
CCNL1-226ENST00000631619 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
CCNL1-226ENST00000631619 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
CCNL1-226ENST00000631619 ABCC5O15440 1437 aa24.99■■□□□ 1.59
CCNL1-226ENST00000631619 FOXD1Q16676 465 aa24.98■■□□□ 1.59
CCNL1-226ENST00000631619 WASHC2AQ641Q2 1341 aa24.97■■□□□ 1.59
CCNL1-226ENST00000631619 ZNF644Q9H582 1327 aaPredicted RBP24.97■■□□□ 1.59
CCNL1-226ENST00000631619 L3MBTL2Q969R5 705 aa24.95■■□□□ 1.59
CCNL1-226ENST00000631619 ANKRD30BQ9BXX2 1392 aa24.93■■□□□ 1.58
CCNL1-226ENST00000631619 EIF4G2P78344 907 aaKnown RBP eCLIP24.92■■□□□ 1.58
CCNL1-226ENST00000631619 CDK11AQ9UQ88 783 aaPredicted RBP24.9■■□□□ 1.58
CCNL1-226ENST00000631619 RPRD2Q5VT52 1461 aaKnown RBP24.9■■□□□ 1.58
CCNL1-226ENST00000631619 PRG4Q92954 1404 aaPredicted RBP24.88■■□□□ 1.57
CCNL1-226ENST00000631619 TEX14Q8IWB6 1497 aa24.87■■□□□ 1.57
CCNL1-226ENST00000631619 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
CCNL1-226ENST00000631619 CEP170Q5SW79 1584 aa24.85■■□□□ 1.57
CCNL1-226ENST00000631619 MAGI1Q96QZ7 1491 aaPredicted RBP24.85■■□□□ 1.57
CCNL1-226ENST00000631619 PLB1Q6P1J6 1458 aa24.84■■□□□ 1.57
CCNL1-226ENST00000631619 CAMSAP2Q08AD1 1489 aa24.83■■□□□ 1.56
CCNL1-226ENST00000631619 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.56
CCNL1-226ENST00000631619 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
CCNL1-226ENST00000631619 SLC4A1APQ9BWU0 796 aaKnown RBP24.82■■□□□ 1.56
CCNL1-226ENST00000631619 NCOA1Q15788 1441 aa24.82■■□□□ 1.56
CCNL1-226ENST00000631619 C11orf95C9JLR9 678 aaPredicted RBP24.81■■□□□ 1.56
CCNL1-226ENST00000631619 ITSN2Q9NZM3 1697 aa24.81■■□□□ 1.56
CCNL1-226ENST00000631619 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
CCNL1-226ENST00000631619 KIF14Q15058 1648 aa24.8■■□□□ 1.56
CCNL1-226ENST00000631619 MSH5O43196 834 aa24.79■■□□□ 1.56
CCNL1-226ENST00000631619 GPATCH8Q9UKJ3 1502 aaKnown RBP24.79■■□□□ 1.56
CCNL1-226ENST00000631619 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
CCNL1-226ENST00000631619 CFDP1Q9UEE9 299 aaPredicted RBP24.79■■□□□ 1.56
CCNL1-226ENST00000631619 ADCY10Q96PN6 1610 aa24.79■■□□□ 1.56
CCNL1-226ENST00000631619 CCDC7Q96M83 1385 aa24.78■■□□□ 1.56
CCNL1-226ENST00000631619 PZPP20742 1482 aa24.78■■□□□ 1.56
CCNL1-226ENST00000631619 ADGBQ8N7X0 1667 aa24.77■■□□□ 1.56
CCNL1-226ENST00000631619 HNRNPUQ00839 825 aaKnown RBP eCLIP24.77■■□□□ 1.56
CCNL1-226ENST00000631619 FANCIQ9NVI1 1328 aa24.76■■□□□ 1.55
CCNL1-226ENST00000631619 SPATA31E1Q6ZUB1 1445 aa24.74■■□□□ 1.55
CCNL1-226ENST00000631619 CROCC2H7BZ55 1655 aa24.74■■□□□ 1.55
CCNL1-226ENST00000631619 ADGRL2O95490 1459 aa24.72■■□□□ 1.55
CCNL1-226ENST00000631619 NUP160Q12769 1436 aa24.71■■□□□ 1.55
CCNL1-226ENST00000631619 FBLN2P98095 1184 aa24.71■■□□□ 1.55
CCNL1-226ENST00000631619 POLR1AO95602 1720 aaPredicted RBP24.71■■□□□ 1.55
CCNL1-226ENST00000631619 CCDC184Q52MB2 194 aa24.71■■□□□ 1.55
CCNL1-226ENST00000631619 CARMIL2Q6F5E8 1435 aa24.7■■□□□ 1.54
CCNL1-226ENST00000631619 JPH4Q96JJ6 628 aa24.7■■□□□ 1.54
CCNL1-226ENST00000631619 ZNF777Q9ULD5 760 aaPredicted RBP24.7■■□□□ 1.54
CCNL1-226ENST00000631619 PRKRIP1Q9H875 184 aaPredicted RBP24.69■■□□□ 1.54
CCNL1-226ENST00000631619 KIF7Q2M1P5 1343 aa24.66■■□□□ 1.54
CCNL1-226ENST00000631619 KIAA1107Q9UPP5 1409 aa24.65■■□□□ 1.54
CCNL1-226ENST00000631619 MBD5Q9P267 1494 aa24.65■■□□□ 1.54
CCNL1-226ENST00000631619 CDC42BPAQ5VT25 1732 aa24.64■■□□□ 1.54
CCNL1-226ENST00000631619 ANKRD30AQ9BXX3 1397 aa24.63■■□□□ 1.53
CCNL1-226ENST00000631619 ABCA8O94911 1581 aa24.62■■□□□ 1.53
CCNL1-226ENST00000631619 ERICH6Q7L0X2 663 aa24.6■■□□□ 1.53
CCNL1-226ENST00000631619 ANKRD50Q9ULJ7 1429 aa24.6■■□□□ 1.53
CCNL1-226ENST00000631619 ABCC10Q5T3U5 1492 aa24.6■■□□□ 1.53
CCNL1-226ENST00000631619 PKD2Q13563 968 aa24.59■■□□□ 1.53
CCNL1-226ENST00000631619 ATP10BO94823 1461 aa24.58■■□□□ 1.53
CCNL1-226ENST00000631619 PLEKHD1A6NEE1 506 aa24.57■■□□□ 1.52
CCNL1-226ENST00000631619 MYT1LQ9UL68 1186 aa24.56■■□□□ 1.52
CCNL1-226ENST00000631619 MRS2Q9HD23 443 aa24.56■■□□□ 1.52
CCNL1-226ENST00000631619 SHANK2Q9UPX8 1470 aa24.55■■□□□ 1.52
CCNL1-226ENST00000631619 FAM9BQ8IZU0 186 aa24.54■■□□□ 1.52
CCNL1-226ENST00000631619 BCORL1Q5H9F3 1711 aa24.54■■□□□ 1.52
CCNL1-226ENST00000631619 C9orf84Q5VXU9 1444 aa24.54■■□□□ 1.52
CCNL1-226ENST00000631619 USP47Q96K76 1375 aa24.52■■□□□ 1.52
CCNL1-226ENST00000631619 IRX6P78412 446 aaPredicted RBP24.52■■□□□ 1.52
CCNL1-226ENST00000631619 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
CCNL1-226ENST00000631619 ERICH6BQ5W0A0 696 aa24.5■■□□□ 1.51
CCNL1-226ENST00000631619 NUP155O75694 1391 aa24.5■■□□□ 1.51
CCNL1-226ENST00000631619 KDM5CP41229 1560 aa24.49■■□□□ 1.51
CCNL1-226ENST00000631619 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
CCNL1-226ENST00000631619 ZBED9Q6R2W3 1325 aa24.47■■□□□ 1.51
CCNL1-226ENST00000631619 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
CCNL1-226ENST00000631619 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
CCNL1-226ENST00000631619 TSPY4P0CV99 314 aa24.43■■□□□ 1.5
CCNL1-226ENST00000631619 TSPY10P0CW01 314 aa24.43■■□□□ 1.5
CCNL1-226ENST00000631619 ARHGEF5Q12774 1597 aa24.43■■□□□ 1.5
CCNL1-226ENST00000631619 RALGAPBQ86X10 1494 aa24.42■■□□□ 1.5
CCNL1-226ENST00000631619 HNRNPMP52272 730 aaKnown RBP eCLIP24.42■■□□□ 1.57e-11■■■■□ 25.8
CCNL1-226ENST00000631619 KIF15Q9NS87 1388 aa24.41■■□□□ 1.5
CCNL1-226ENST00000631619 ARHGEF12Q9NZN5 1544 aa24.41■■□□□ 1.5
CCNL1-226ENST00000631619 PTPRGP23470 1445 aa24.41■■□□□ 1.5
CCNL1-226ENST00000631619 ARID4BQ4LE39 1312 aaPredicted RBP24.39■■□□□ 1.49
CCNL1-226ENST00000631619 PPP4R2Q9NY27 417 aa24.39■■□□□ 1.49
CCNL1-226ENST00000631619 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
CCNL1-226ENST00000631619 POLR3GLQ9BT43 218 aa24.38■■□□□ 1.49
CCNL1-226ENST00000631619 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
CCNL1-226ENST00000631619 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
CCNL1-226ENST00000631619 CARD11Q9BXL7 1154 aa24.34■■□□□ 1.49
CCNL1-226ENST00000631619 CCDC141Q6ZP82 1450 aa24.34■■□□□ 1.49
CCNL1-226ENST00000631619 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.48
CCNL1-226ENST00000631619 DEKP35659 375 aaKnown RBP24.32■■□□□ 1.48
CCNL1-226ENST00000631619 KDM2AQ9Y2K7 1162 aa24.3■■□□□ 1.48
CCNL1-226ENST00000631619 ROCK2O75116 1388 aaKnown RBP24.3■■□□□ 1.48
CCNL1-226ENST00000631619 FAM135AQ9P2D6 1515 aa24.3■■□□□ 1.48
CCNL1-226ENST00000631619 DCAF11Q8TEB1 546 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms