RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RAPGEF3O95398 923 aa18.02■□□□□ 0.48
SYNGAP1-207ENST00000628646 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
SYNGAP1-207ENST00000628646 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
SYNGAP1-207ENST00000628646 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
SYNGAP1-207ENST00000628646 LRRIQ1Q96JM4 1722 aa18.01■□□□□ 0.47
SYNGAP1-207ENST00000628646 WDR7Q9Y4E6 1490 aa18.01■□□□□ 0.47
SYNGAP1-207ENST00000628646 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
SYNGAP1-207ENST00000628646 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
SYNGAP1-207ENST00000628646 FGD6Q6ZV73 1430 aa17.99■□□□□ 0.47
SYNGAP1-207ENST00000628646 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
SYNGAP1-207ENST00000628646 KIF3BO15066 747 aa17.97■□□□□ 0.47
SYNGAP1-207ENST00000628646 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
SYNGAP1-207ENST00000628646 STAG3Q9UJ98 1225 aa17.96■□□□□ 0.47
SYNGAP1-207ENST00000628646 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.47
SYNGAP1-207ENST00000628646 KIF14Q15058 1648 aa17.96■□□□□ 0.46
SYNGAP1-207ENST00000628646 ANKRD30AQ9BXX3 1397 aa17.95■□□□□ 0.46
SYNGAP1-207ENST00000628646 SCAPERQ9BY12 1400 aa17.94■□□□□ 0.46
SYNGAP1-207ENST00000628646 ABCA8O94911 1581 aa17.94■□□□□ 0.46
SYNGAP1-207ENST00000628646 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
SYNGAP1-207ENST00000628646 UHRF1BP1LA0JNW5 1464 aa17.92■□□□□ 0.46
SYNGAP1-207ENST00000628646 MAPKBP1O60336 1514 aa17.91■□□□□ 0.46
SYNGAP1-207ENST00000628646 SHROOM2Q13796 1616 aa17.91■□□□□ 0.46
SYNGAP1-207ENST00000628646 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
SYNGAP1-207ENST00000628646 BCANQ96GW7 911 aa17.9■□□□□ 0.46
SYNGAP1-207ENST00000628646 KDM5BQ9UGL1 1544 aa17.9■□□□□ 0.46
SYNGAP1-207ENST00000628646 FANCAO15360 1455 aa17.88■□□□□ 0.45
SYNGAP1-207ENST00000628646 ADGRL1O94910 1474 aa17.86■□□□□ 0.45
SYNGAP1-207ENST00000628646 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
SYNGAP1-207ENST00000628646 KANK1Q14678 1352 aa17.85■□□□□ 0.45
SYNGAP1-207ENST00000628646 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
SYNGAP1-207ENST00000628646 GPATCH8Q9UKJ3 1502 aaKnown RBP17.84■□□□□ 0.45
SYNGAP1-207ENST00000628646 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
SYNGAP1-207ENST00000628646 PLCH2O75038 1416 aa17.83■□□□□ 0.45
SYNGAP1-207ENST00000628646 AKNAQ7Z591 1439 aa17.83■□□□□ 0.44
SYNGAP1-207ENST00000628646 ZCCHC11Q5TAX3 1644 aaKnown RBP17.82■□□□□ 0.44
SYNGAP1-207ENST00000628646 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
SYNGAP1-207ENST00000628646 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
SYNGAP1-207ENST00000628646 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
SYNGAP1-207ENST00000628646 NUP155O75694 1391 aa17.81■□□□□ 0.44
SYNGAP1-207ENST00000628646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.444e-6■■■■□ 23.1
SYNGAP1-207ENST00000628646 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
SYNGAP1-207ENST00000628646 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
SYNGAP1-207ENST00000628646 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
SYNGAP1-207ENST00000628646 TEX14Q8IWB6 1497 aa17.8■□□□□ 0.44
SYNGAP1-207ENST00000628646 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
SYNGAP1-207ENST00000628646 CAMSAP2Q08AD1 1489 aa17.78■□□□□ 0.44
SYNGAP1-207ENST00000628646 C9orf84Q5VXU9 1444 aa17.76■□□□□ 0.43
SYNGAP1-207ENST00000628646 MAGI3Q5TCQ9 1506 aa17.76■□□□□ 0.43
SYNGAP1-207ENST00000628646 FOXD1Q16676 465 aa17.75■□□□□ 0.43
SYNGAP1-207ENST00000628646 RGL3Q3MIN7 710 aa17.75■□□□□ 0.43
SYNGAP1-207ENST00000628646 PKD2Q13563 968 aa17.75■□□□□ 0.43
SYNGAP1-207ENST00000628646 MIER1Q8N108 512 aa17.73■□□□□ 0.43
SYNGAP1-207ENST00000628646 CCDC141Q6ZP82 1450 aa17.72■□□□□ 0.43
SYNGAP1-207ENST00000628646 TSPOAP1O95153 1857 aa17.72■□□□□ 0.43
SYNGAP1-207ENST00000628646 DAPK1P53355 1430 aa17.72■□□□□ 0.43
SYNGAP1-207ENST00000628646 KDM2AQ9Y2K7 1162 aa17.72■□□□□ 0.43
SYNGAP1-207ENST00000628646 ABCC10Q5T3U5 1492 aa17.72■□□□□ 0.43
SYNGAP1-207ENST00000628646 PTPN23Q9H3S7 1636 aa17.71■□□□□ 0.43
SYNGAP1-207ENST00000628646 PTPRKQ15262 1439 aa17.71■□□□□ 0.42
SYNGAP1-207ENST00000628646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.7■□□□□ 0.427e-8■□□□□ 9
SYNGAP1-207ENST00000628646 ANKRD50Q9ULJ7 1429 aa17.7■□□□□ 0.42
SYNGAP1-207ENST00000628646 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
SYNGAP1-207ENST00000628646 PPP1R15AO75807 674 aaPredicted RBP17.69■□□□□ 0.42
SYNGAP1-207ENST00000628646 MPHOSPH9Q99550 1183 aa17.69■□□□□ 0.42
SYNGAP1-207ENST00000628646 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
SYNGAP1-207ENST00000628646 TRAPPC8Q9Y2L5 1435 aa17.68■□□□□ 0.42
SYNGAP1-207ENST00000628646 ABCC5O15440 1437 aa17.67■□□□□ 0.42
SYNGAP1-207ENST00000628646 SYCP2Q9BX26 1530 aa17.67■□□□□ 0.42
SYNGAP1-207ENST00000628646 ITSN2Q9NZM3 1697 aa17.65■□□□□ 0.42
SYNGAP1-207ENST00000628646 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
SYNGAP1-207ENST00000628646 SIN3AQ96ST3 1273 aa17.64■□□□□ 0.41
SYNGAP1-207ENST00000628646 TTC37Q6PGP7 1564 aa17.63■□□□□ 0.41
SYNGAP1-207ENST00000628646 ZNF518AQ6AHZ1 1483 aa17.63■□□□□ 0.41
SYNGAP1-207ENST00000628646 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
SYNGAP1-207ENST00000628646 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
SYNGAP1-207ENST00000628646 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
SYNGAP1-207ENST00000628646 NEO1Q92859 1461 aa17.59■□□□□ 0.41
SYNGAP1-207ENST00000628646 POGZQ7Z3K3 1410 aa17.59■□□□□ 0.41
SYNGAP1-207ENST00000628646 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.4
SYNGAP1-207ENST00000628646 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
SYNGAP1-207ENST00000628646 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
SYNGAP1-207ENST00000628646 NAIPQ13075 1403 aa17.56■□□□□ 0.4
SYNGAP1-207ENST00000628646 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
SYNGAP1-207ENST00000628646 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
SYNGAP1-207ENST00000628646 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
SYNGAP1-207ENST00000628646 DHX29Q7Z478 1369 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-207ENST00000628646 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
SYNGAP1-207ENST00000628646 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
SYNGAP1-207ENST00000628646 KDM6BO15054 1643 aa17.5■□□□□ 0.39
SYNGAP1-207ENST00000628646 CEBPAP49715 358 aaPredicted RBP17.5■□□□□ 0.39
SYNGAP1-207ENST00000628646 A2MP01023 1474 aa17.49■□□□□ 0.39
SYNGAP1-207ENST00000628646 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
SYNGAP1-207ENST00000628646 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
SYNGAP1-207ENST00000628646 DIP2BQ9P265 1576 aa17.47■□□□□ 0.39
SYNGAP1-207ENST00000628646 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
SYNGAP1-207ENST00000628646 ABCA9Q8IUA7 1624 aa17.47■□□□□ 0.39
SYNGAP1-207ENST00000628646 YEATS2Q9ULM3 1422 aa17.46■□□□□ 0.39
SYNGAP1-207ENST00000628646 CFAP74Q9C0B2 1584 aa17.46■□□□□ 0.39
SYNGAP1-207ENST00000628646 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
SYNGAP1-207ENST00000628646 SAMD9LQ8IVG5 1584 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms