RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
CHD2-213ENST00000628118 APLP2Q06481 763 aa12.65□□□□□ -0.38
CHD2-213ENST00000628118 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
CHD2-213ENST00000628118 NEO1Q92859 1461 aa12.65□□□□□ -0.38
CHD2-213ENST00000628118 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
CHD2-213ENST00000628118 PLCH2O75038 1416 aa12.64□□□□□ -0.39
CHD2-213ENST00000628118 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
CHD2-213ENST00000628118 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
CHD2-213ENST00000628118 TTC37Q6PGP7 1564 aa12.63□□□□□ -0.39
CHD2-213ENST00000628118 KDM6BO15054 1643 aa12.62□□□□□ -0.39
CHD2-213ENST00000628118 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
CHD2-213ENST00000628118 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
CHD2-213ENST00000628118 FANCAO15360 1455 aa12.6□□□□□ -0.39
CHD2-213ENST00000628118 EFCAB2Q5VUJ9 269 aa12.6□□□□□ -0.39
CHD2-213ENST00000628118 LRRC9Q6ZRR7 1453 aa12.59□□□□□ -0.39
CHD2-213ENST00000628118 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
CHD2-213ENST00000628118 SUPT6HQ7KZ85 1726 aaKnown RBP12.58□□□□□ -0.4
CHD2-213ENST00000628118 AKNAQ7Z591 1439 aa12.58□□□□□ -0.4
CHD2-213ENST00000628118 PREX2Q70Z35 1606 aa12.57□□□□□ -0.4
CHD2-213ENST00000628118 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
CHD2-213ENST00000628118 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
CHD2-213ENST00000628118 GPATCH8Q9UKJ3 1502 aaKnown RBP12.56□□□□□ -0.4
CHD2-213ENST00000628118 NCOA2Q15596 1464 aa12.55□□□□□ -0.4
CHD2-213ENST00000628118 CDC42BPAQ5VT25 1732 aa12.55□□□□□ -0.4
CHD2-213ENST00000628118 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
CHD2-213ENST00000628118 CDC42BPBQ9Y5S2 1711 aa12.54□□□□□ -0.4
CHD2-213ENST00000628118 DENND4BO75064 1496 aaPredicted RBP12.54□□□□□ -0.4
CHD2-213ENST00000628118 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
CHD2-213ENST00000628118 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
CHD2-213ENST00000628118 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
CHD2-213ENST00000628118 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
CHD2-213ENST00000628118 KANK4Q5T7N3 995 aaPredicted RBP12.52□□□□□ -0.41
CHD2-213ENST00000628118 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
CHD2-213ENST00000628118 KIAA1107Q9UPP5 1409 aa12.51□□□□□ -0.41
CHD2-213ENST00000628118 ABCC1P33527 1531 aa12.49□□□□□ -0.41
CHD2-213ENST00000628118 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
CHD2-213ENST00000628118 POGZQ7Z3K3 1410 aa12.49□□□□□ -0.41
CHD2-213ENST00000628118 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
CHD2-213ENST00000628118 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
CHD2-213ENST00000628118 ZMYM4Q5VZL5 1548 aa12.48□□□□□ -0.41
CHD2-213ENST00000628118 ZNF518AQ6AHZ1 1483 aa12.48□□□□□ -0.41
CHD2-213ENST00000628118 RSPH4AQ5TD94 716 aa12.48□□□□□ -0.41
CHD2-213ENST00000628118 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
CHD2-213ENST00000628118 RAPGEF3O95398 923 aa12.47□□□□□ -0.41
CHD2-213ENST00000628118 FRMPD1Q5SYB0 1578 aa12.47□□□□□ -0.41
CHD2-213ENST00000628118 SAMD9LQ8IVG5 1584 aa12.47□□□□□ -0.41
CHD2-213ENST00000628118 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.41
CHD2-213ENST00000628118 KDM5CP41229 1560 aa12.45□□□□□ -0.42
CHD2-213ENST00000628118 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
CHD2-213ENST00000628118 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
CHD2-213ENST00000628118 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
CHD2-213ENST00000628118 CAMSAP2Q08AD1 1489 aa12.42□□□□□ -0.42
CHD2-213ENST00000628118 TRAPPC8Q9Y2L5 1435 aa12.42□□□□□ -0.42
CHD2-213ENST00000628118 ZFYVE16Q7Z3T8 1539 aa12.42□□□□□ -0.42
CHD2-213ENST00000628118 ARHGEF40Q8TER5 1519 aa12.42□□□□□ -0.42
CHD2-213ENST00000628118 MBD5Q9P267 1494 aa12.41□□□□□ -0.42
CHD2-213ENST00000628118 AFAP1Q8N556 730 aa12.41□□□□□ -0.42
CHD2-213ENST00000628118 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
CHD2-213ENST00000628118 HECW2Q9P2P5 1572 aa12.4□□□□□ -0.42
CHD2-213ENST00000628118 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
CHD2-213ENST00000628118 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHD2-213ENST00000628118 CCDC141Q6ZP82 1450 aa12.4□□□□□ -0.43
CHD2-213ENST00000628118 SPAG9O60271 1321 aaKnown RBP12.39□□□□□ -0.43
CHD2-213ENST00000628118 ZNF644Q9H582 1327 aaPredicted RBP12.39□□□□□ -0.43
CHD2-213ENST00000628118 RTEL1-TNFRSF6BF6WH68 1400 aa12.39□□□□□ -0.43
CHD2-213ENST00000628118 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
CHD2-213ENST00000628118 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
CHD2-213ENST00000628118 ATP10AO60312 1499 aa12.38□□□□□ -0.43
CHD2-213ENST00000628118 C9orf84Q5VXU9 1444 aa12.37□□□□□ -0.43
CHD2-213ENST00000628118 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
CHD2-213ENST00000628118 TSPY4P0CV99 314 aa12.37□□□□□ -0.43
CHD2-213ENST00000628118 TSPY10P0CW01 314 aa12.37□□□□□ -0.43
CHD2-213ENST00000628118 REREQ9P2R6 1566 aa12.37□□□□□ -0.43
CHD2-213ENST00000628118 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
CHD2-213ENST00000628118 KIDINS220Q9ULH0 1771 aa12.35□□□□□ -0.43
CHD2-213ENST00000628118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHD2-213ENST00000628118 ATP7AQ04656 1500 aa12.35□□□□□ -0.43
CHD2-213ENST00000628118 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
CHD2-213ENST00000628118 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
CHD2-213ENST00000628118 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
CHD2-213ENST00000628118 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
CHD2-213ENST00000628118 AGLP35573 1532 aa12.32□□□□□ -0.44
CHD2-213ENST00000628118 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
CHD2-213ENST00000628118 DNMT1P26358 1616 aaKnown RBP12.31□□□□□ -0.44
CHD2-213ENST00000628118 ADGBQ8N7X0 1667 aa12.31□□□□□ -0.44
CHD2-213ENST00000628118 ARID4BQ4LE39 1312 aaPredicted RBP12.31□□□□□ -0.44
CHD2-213ENST00000628118 ABCC5O15440 1437 aa12.3□□□□□ -0.44
CHD2-213ENST00000628118 DAPK1P53355 1430 aa12.3□□□□□ -0.44
CHD2-213ENST00000628118 RRBP1Q9P2E9 1410 aaKnown RBP12.29□□□□□ -0.44
CHD2-213ENST00000628118 A2MP01023 1474 aa12.29□□□□□ -0.44
CHD2-213ENST00000628118 FAM50AQ14320 339 aaKnown RBP12.29□□□□□ -0.44
CHD2-213ENST00000628118 CROCC2H7BZ55 1655 aa12.29□□□□□ -0.44
CHD2-213ENST00000628118 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
CHD2-213ENST00000628118 PPARGC1BQ86YN6 1023 aaKnown RBP12.28□□□□□ -0.44
CHD2-213ENST00000628118 DHX29Q7Z478 1369 aaKnown RBP12.28□□□□□ -0.44
CHD2-213ENST00000628118 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
CHD2-213ENST00000628118 ANKRD30AQ9BXX3 1397 aa12.27□□□□□ -0.45
CHD2-213ENST00000628118 ADAMTSL3P82987 1691 aa12.26□□□□□ -0.45
CHD2-213ENST00000628118 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
CHD2-213ENST00000628118 ADGRL2O95490 1459 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms