RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 ABCC2Q92887 1545 aa12.94□□□□□ -0.34
CHD2-211ENST00000627460 HRCP23327 699 aa12.94□□□□□ -0.34
CHD2-211ENST00000627460 ADCY10Q96PN6 1610 aa12.93□□□□□ -0.34
CHD2-211ENST00000627460 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
CHD2-211ENST00000627460 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
CHD2-211ENST00000627460 MAGI3Q5TCQ9 1506 aa12.91□□□□□ -0.34
CHD2-211ENST00000627460 KIF14Q15058 1648 aa12.91□□□□□ -0.34
CHD2-211ENST00000627460 ATP10BO94823 1461 aa12.91□□□□□ -0.34
CHD2-211ENST00000627460 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
CHD2-211ENST00000627460 FAM50AQ14320 339 aaKnown RBP12.88□□□□□ -0.35
CHD2-211ENST00000627460 PTPN23Q9H3S7 1636 aa12.88□□□□□ -0.35
CHD2-211ENST00000627460 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
CHD2-211ENST00000627460 CCER1Q8TC90 406 aaPredicted RBP12.86□□□□□ -0.35
CHD2-211ENST00000627460 KDM5BQ9UGL1 1544 aa12.86□□□□□ -0.35
CHD2-211ENST00000627460 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
CHD2-211ENST00000627460 CLSPNQ9HAW4 1339 aa12.85□□□□□ -0.35
CHD2-211ENST00000627460 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
CHD2-211ENST00000627460 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
CHD2-211ENST00000627460 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
CHD2-211ENST00000627460 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
CHD2-211ENST00000627460 SETD5Q9C0A6 1442 aa12.8□□□□□ -0.36
CHD2-211ENST00000627460 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHD2-211ENST00000627460 ABCC10Q5T3U5 1492 aa12.79□□□□□ -0.36
CHD2-211ENST00000627460 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
CHD2-211ENST00000627460 ITGAEP38570 1179 aa12.78□□□□□ -0.36
CHD2-211ENST00000627460 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
CHD2-211ENST00000627460 HFM1A2PYH4 1435 aa12.77□□□□□ -0.37
CHD2-211ENST00000627460 PLEKHH2Q8IVE3 1493 aa12.77□□□□□ -0.37
CHD2-211ENST00000627460 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.37
CHD2-211ENST00000627460 ROCK1Q13464 1354 aa12.76□□□□□ -0.37
CHD2-211ENST00000627460 CAMSAP2Q08AD1 1489 aa12.75□□□□□ -0.37
CHD2-211ENST00000627460 CDC42BPAQ5VT25 1732 aa12.75□□□□□ -0.37
CHD2-211ENST00000627460 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
CHD2-211ENST00000627460 ARAP3Q8WWN8 1544 aa12.75□□□□□ -0.37
CHD2-211ENST00000627460 WDR7Q9Y4E6 1490 aa12.74□□□□□ -0.37
CHD2-211ENST00000627460 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
CHD2-211ENST00000627460 DAPK1P53355 1430 aa12.73□□□□□ -0.37
CHD2-211ENST00000627460 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
CHD2-211ENST00000627460 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
CHD2-211ENST00000627460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHD2-211ENST00000627460 GCC2Q8IWJ2 1684 aa12.71□□□□□ -0.37
CHD2-211ENST00000627460 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
CHD2-211ENST00000627460 RNF39Q9H2S5 420 aa12.71□□□□□ -0.37
CHD2-211ENST00000627460 ARHGEF5Q12774 1597 aa12.71□□□□□ -0.37
CHD2-211ENST00000627460 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
CHD2-211ENST00000627460 ARHGAP5Q13017 1502 aa12.7□□□□□ -0.38
CHD2-211ENST00000627460 PLCH2O75038 1416 aa12.7□□□□□ -0.38
CHD2-211ENST00000627460 KIAA1107Q9UPP5 1409 aa12.7□□□□□ -0.38
CHD2-211ENST00000627460 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
CHD2-211ENST00000627460 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
CHD2-211ENST00000627460 ADGRL2O95490 1459 aa12.69□□□□□ -0.38
CHD2-211ENST00000627460 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
CHD2-211ENST00000627460 ABCC5O15440 1437 aa12.69□□□□□ -0.38
CHD2-211ENST00000627460 NAIPQ13075 1403 aa12.69□□□□□ -0.38
CHD2-211ENST00000627460 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
CHD2-211ENST00000627460 ANKRD30AQ9BXX3 1397 aa12.69□□□□□ -0.38
CHD2-211ENST00000627460 CROCC2H7BZ55 1655 aa12.68□□□□□ -0.38
CHD2-211ENST00000627460 EFCAB2Q5VUJ9 269 aa12.68□□□□□ -0.38
CHD2-211ENST00000627460 TTC37Q6PGP7 1564 aa12.68□□□□□ -0.38
CHD2-211ENST00000627460 ABCA9Q8IUA7 1624 aa12.67□□□□□ -0.38
CHD2-211ENST00000627460 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
CHD2-211ENST00000627460 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
CHD2-211ENST00000627460 CDC42BPBQ9Y5S2 1711 aa12.67□□□□□ -0.38
CHD2-211ENST00000627460 CCDC141Q6ZP82 1450 aa12.66□□□□□ -0.38
CHD2-211ENST00000627460 PTPRKQ15262 1439 aa12.66□□□□□ -0.38
CHD2-211ENST00000627460 KCNH8Q96L42 1107 aa12.65□□□□□ -0.38
CHD2-211ENST00000627460 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
CHD2-211ENST00000627460 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
CHD2-211ENST00000627460 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
CHD2-211ENST00000627460 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
CHD2-211ENST00000627460 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
CHD2-211ENST00000627460 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
CHD2-211ENST00000627460 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
CHD2-211ENST00000627460 MAST1Q9Y2H9 1570 aa12.63□□□□□ -0.39
CHD2-211ENST00000627460 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
CHD2-211ENST00000627460 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
CHD2-211ENST00000627460 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
CHD2-211ENST00000627460 MBD5Q9P267 1494 aa12.62□□□□□ -0.39
CHD2-211ENST00000627460 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
CHD2-211ENST00000627460 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
CHD2-211ENST00000627460 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
CHD2-211ENST00000627460 RRP7BPQ9NSQ0 103 aa12.6□□□□□ -0.39
CHD2-211ENST00000627460 ABCC1P33527 1531 aa12.59□□□□□ -0.39
CHD2-211ENST00000627460 SYCP2Q9BX26 1530 aa12.59□□□□□ -0.39
CHD2-211ENST00000627460 FANCAO15360 1455 aa12.59□□□□□ -0.39
CHD2-211ENST00000627460 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
CHD2-211ENST00000627460 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
CHD2-211ENST00000627460 RTEL1-TNFRSF6BF6WH68 1400 aa12.57□□□□□ -0.4
CHD2-211ENST00000627460 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
CHD2-211ENST00000627460 ANKRD50Q9ULJ7 1429 aa12.56□□□□□ -0.4
CHD2-211ENST00000627460 HNRNPMP52272 730 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHD2-211ENST00000627460 CYB5RLQ6IPT4 315 aa12.56□□□□□ -0.4
CHD2-211ENST00000627460 GLI2P10070 1586 aa12.56□□□□□ -0.4
CHD2-211ENST00000627460 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
CHD2-211ENST00000627460 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
CHD2-211ENST00000627460 TRIM52Q96A61 297 aa12.55□□□□□ -0.4
CHD2-211ENST00000627460 NEO1Q92859 1461 aa12.54□□□□□ -0.4
CHD2-211ENST00000627460 DUOX2Q9NRD8 1548 aa12.53□□□□□ -0.4
CHD2-211ENST00000627460 POLA2Q14181 598 aa12.53□□□□□ -0.4
CHD2-211ENST00000627460 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms