RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
CHD2-211ENST00000627460 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
CHD2-211ENST00000627460 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
CHD2-211ENST00000627460 PHF23Q9BUL5 403 aaPredicted RBP18.34■□□□□ 0.53
CHD2-211ENST00000627460 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
CHD2-211ENST00000627460 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
CHD2-211ENST00000627460 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
CHD2-211ENST00000627460 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
CHD2-211ENST00000627460 FOXD1Q16676 465 aa16.22■□□□□ 0.19
CHD2-211ENST00000627460 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
CHD2-211ENST00000627460 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
CHD2-211ENST00000627460 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
CHD2-211ENST00000627460 ADRA2BP18089 450 aa15.99■□□□□ 0.15
CHD2-211ENST00000627460 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
CHD2-211ENST00000627460 ABCC9O60706 1549 aa15.97■□□□□ 0.15
CHD2-211ENST00000627460 NACADO15069 1562 aa15.92■□□□□ 0.14
CHD2-211ENST00000627460 RB1CC1Q8TDY2 1594 aa15.78■□□□□ 0.12
CHD2-211ENST00000627460 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
CHD2-211ENST00000627460 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
CHD2-211ENST00000627460 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
CHD2-211ENST00000627460 KCNA4P22459 653 aa15.31■□□□□ 0.04
CHD2-211ENST00000627460 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
CHD2-211ENST00000627460 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
CHD2-211ENST00000627460 SUPT5HO00267 1087 aaKnown RBP15.13■□□□□ 0.01
CHD2-211ENST00000627460 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
CHD2-211ENST00000627460 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
CHD2-211ENST00000627460 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
CHD2-211ENST00000627460 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
CHD2-211ENST00000627460 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
CHD2-211ENST00000627460 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
CHD2-211ENST00000627460 MROH2BQ7Z745 1585 aa14.95□□□□□ -0.02
CHD2-211ENST00000627460 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
CHD2-211ENST00000627460 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.04
CHD2-211ENST00000627460 WIZO95785 1651 aa14.82□□□□□ -0.04
CHD2-211ENST00000627460 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
CHD2-211ENST00000627460 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
CHD2-211ENST00000627460 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
CHD2-211ENST00000627460 EIF4G1Q04637 1599 aaKnown RBP14.75□□□□□ -0.05
CHD2-211ENST00000627460 MSH5O43196 834 aa14.74□□□□□ -0.05
CHD2-211ENST00000627460 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
CHD2-211ENST00000627460 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
CHD2-211ENST00000627460 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
CHD2-211ENST00000627460 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
CHD2-211ENST00000627460 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
CHD2-211ENST00000627460 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
CHD2-211ENST00000627460 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
CHD2-211ENST00000627460 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
CHD2-211ENST00000627460 CCDC88BA6NC98 1476 aa14.56□□□□□ -0.08
CHD2-211ENST00000627460 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
CHD2-211ENST00000627460 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
CHD2-211ENST00000627460 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
CHD2-211ENST00000627460 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
CHD2-211ENST00000627460 CFTRP13569 1480 aa14.3□□□□□ -0.12
CHD2-211ENST00000627460 PRDM2Q13029 1718 aa14.27□□□□□ -0.13
CHD2-211ENST00000627460 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
CHD2-211ENST00000627460 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
CHD2-211ENST00000627460 WRNQ14191 1432 aaPredicted RBP eCLIP14.23□□□□□ -0.13
CHD2-211ENST00000627460 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
CHD2-211ENST00000627460 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
CHD2-211ENST00000627460 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
CHD2-211ENST00000627460 EEA1Q15075 1411 aa14.15□□□□□ -0.14
CHD2-211ENST00000627460 ZBTB22O15209 634 aa14.12□□□□□ -0.15
CHD2-211ENST00000627460 TOP2BQ02880 1626 aa14.12□□□□□ -0.15
CHD2-211ENST00000627460 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
CHD2-211ENST00000627460 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
CHD2-211ENST00000627460 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
CHD2-211ENST00000627460 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
CHD2-211ENST00000627460 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
CHD2-211ENST00000627460 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
CHD2-211ENST00000627460 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
CHD2-211ENST00000627460 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
CHD2-211ENST00000627460 CUX1P39880 1505 aa14□□□□□ -0.17
CHD2-211ENST00000627460 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
CHD2-211ENST00000627460 NESP48681 1621 aa13.97□□□□□ -0.17
CHD2-211ENST00000627460 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
CHD2-211ENST00000627460 FAM9AQ8IZU1 332 aaPredicted RBP13.92□□□□□ -0.18
CHD2-211ENST00000627460 SOGA1O94964 1423 aa13.91□□□□□ -0.18
CHD2-211ENST00000627460 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
CHD2-211ENST00000627460 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
CHD2-211ENST00000627460 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
CHD2-211ENST00000627460 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
CHD2-211ENST00000627460 KIF21BO75037 1637 aa13.86□□□□□ -0.19
CHD2-211ENST00000627460 GOLGA3Q08378 1498 aa13.86□□□□□ -0.19
CHD2-211ENST00000627460 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
CHD2-211ENST00000627460 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
CHD2-211ENST00000627460 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
CHD2-211ENST00000627460 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
CHD2-211ENST00000627460 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
CHD2-211ENST00000627460 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
CHD2-211ENST00000627460 CUX2O14529 1486 aa13.8□□□□□ -0.2
CHD2-211ENST00000627460 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
CHD2-211ENST00000627460 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
CHD2-211ENST00000627460 TNIKQ9UKE5 1360 aa13.8□□□□□ -0.2
CHD2-211ENST00000627460 WDR62O43379 1518 aa13.77□□□□□ -0.21
CHD2-211ENST00000627460 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
CHD2-211ENST00000627460 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
CHD2-211ENST00000627460 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
CHD2-211ENST00000627460 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
CHD2-211ENST00000627460 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
CHD2-211ENST00000627460 CUL7Q14999 1698 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms