RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 FOXD1Q16676 465 aa16.98■□□□□ 0.31
TP53-227ENST00000622645 ABCC5O15440 1437 aa16.97■□□□□ 0.31
TP53-227ENST00000622645 KDM5BQ9UGL1 1544 aa16.97■□□□□ 0.31
TP53-227ENST00000622645 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
TP53-227ENST00000622645 NUP160Q12769 1436 aa16.94■□□□□ 0.3
TP53-227ENST00000622645 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
TP53-227ENST00000622645 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
TP53-227ENST00000622645 CARMIL2Q6F5E8 1435 aa16.93■□□□□ 0.3
TP53-227ENST00000622645 ZNF777Q9ULD5 760 aaPredicted RBP16.92■□□□□ 0.3
TP53-227ENST00000622645 DNMT1P26358 1616 aaKnown RBP16.91■□□□□ 0.3
TP53-227ENST00000622645 ANP32CO43423 234 aa16.9■□□□□ 0.3
TP53-227ENST00000622645 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
TP53-227ENST00000622645 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
TP53-227ENST00000622645 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
TP53-227ENST00000622645 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
TP53-227ENST00000622645 KIF14Q15058 1648 aa16.87■□□□□ 0.29
TP53-227ENST00000622645 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
TP53-227ENST00000622645 ANKRD30BQ9BXX2 1392 aa16.86■□□□□ 0.29
TP53-227ENST00000622645 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
TP53-227ENST00000622645 PLEKHD1A6NEE1 506 aa16.84■□□□□ 0.29
TP53-227ENST00000622645 CCER2I3L3R5 266 aa16.84■□□□□ 0.29
TP53-227ENST00000622645 NCOA1Q15788 1441 aa16.83■□□□□ 0.29
TP53-227ENST00000622645 EIF4G2P78344 907 aaKnown RBP eCLIP16.82■□□□□ 0.28
TP53-227ENST00000622645 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
TP53-227ENST00000622645 ATP10BO94823 1461 aa16.81■□□□□ 0.28
TP53-227ENST00000622645 ITSN2Q9NZM3 1697 aa16.8■□□□□ 0.28
TP53-227ENST00000622645 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
TP53-227ENST00000622645 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
TP53-227ENST00000622645 ABCA8O94911 1581 aa16.8■□□□□ 0.28
TP53-227ENST00000622645 ADCY10Q96PN6 1610 aa16.8■□□□□ 0.28
TP53-227ENST00000622645 PZPP20742 1482 aa16.77■□□□□ 0.28
TP53-227ENST00000622645 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
TP53-227ENST00000622645 ANKRD30AQ9BXX3 1397 aa16.76■□□□□ 0.27
TP53-227ENST00000622645 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
TP53-227ENST00000622645 ABCC10Q5T3U5 1492 aa16.75■□□□□ 0.27
TP53-227ENST00000622645 PTPRGP23470 1445 aa16.75■□□□□ 0.27
TP53-227ENST00000622645 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
TP53-227ENST00000622645 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
TP53-227ENST00000622645 PKD2Q13563 968 aa16.73■□□□□ 0.27
TP53-227ENST00000622645 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
TP53-227ENST00000622645 CDC42BPAQ5VT25 1732 aa16.72■□□□□ 0.27
TP53-227ENST00000622645 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.27
TP53-227ENST00000622645 CROCC2H7BZ55 1655 aa16.71■□□□□ 0.27
TP53-227ENST00000622645 TSPY4P0CV99 314 aa16.7■□□□□ 0.26
TP53-227ENST00000622645 TSPY10P0CW01 314 aa16.7■□□□□ 0.26
TP53-227ENST00000622645 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
TP53-227ENST00000622645 C9orf84Q5VXU9 1444 aa16.69■□□□□ 0.26
TP53-227ENST00000622645 NUP155O75694 1391 aa16.67■□□□□ 0.26
TP53-227ENST00000622645 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
TP53-227ENST00000622645 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
TP53-227ENST00000622645 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
TP53-227ENST00000622645 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
TP53-227ENST00000622645 SHANK2Q9UPX8 1470 aa16.65■□□□□ 0.26
TP53-227ENST00000622645 FKBP8Q14318 412 aa16.64■□□□□ 0.26
TP53-227ENST00000622645 BCANQ96GW7 911 aa16.64■□□□□ 0.25
TP53-227ENST00000622645 CHD1O14646 1710 aa16.63■□□□□ 0.25
TP53-227ENST00000622645 MBD5Q9P267 1494 aa16.63■□□□□ 0.25
TP53-227ENST00000622645 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
TP53-227ENST00000622645 KIF7Q2M1P5 1343 aa16.63■□□□□ 0.25
TP53-227ENST00000622645 CCDC184Q52MB2 194 aa16.62■□□□□ 0.25
TP53-227ENST00000622645 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
TP53-227ENST00000622645 PRKRIP1Q9H875 184 aaPredicted RBP16.6■□□□□ 0.25
TP53-227ENST00000622645 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
TP53-227ENST00000622645 ERCC6L2Q5T890 1561 aa16.58■□□□□ 0.24
TP53-227ENST00000622645 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
TP53-227ENST00000622645 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
TP53-227ENST00000622645 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
TP53-227ENST00000622645 USP47Q96K76 1375 aa16.56■□□□□ 0.24
TP53-227ENST00000622645 NEFLP07196 543 aa16.55■□□□□ 0.24
TP53-227ENST00000622645 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
TP53-227ENST00000622645 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
TP53-227ENST00000622645 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
TP53-227ENST00000622645 POLR3GLQ9BT43 218 aa16.54■□□□□ 0.24
TP53-227ENST00000622645 KDM2AQ9Y2K7 1162 aa16.54■□□□□ 0.24
TP53-227ENST00000622645 KDM5DQ9BY66 1539 aa16.53■□□□□ 0.24
TP53-227ENST00000622645 TTC37Q6PGP7 1564 aa16.53■□□□□ 0.24
TP53-227ENST00000622645 ARHGAP5Q13017 1502 aa16.53■□□□□ 0.24
TP53-227ENST00000622645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.52■□□□□ 0.24
TP53-227ENST00000622645 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.24
TP53-227ENST00000622645 FAM9BQ8IZU0 186 aa16.52■□□□□ 0.24
TP53-227ENST00000622645 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
TP53-227ENST00000622645 DCAF11Q8TEB1 546 aa16.51■□□□□ 0.23
TP53-227ENST00000622645 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
TP53-227ENST00000622645 ABCC2Q92887 1545 aa16.5■□□□□ 0.23
TP53-227ENST00000622645 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
TP53-227ENST00000622645 UHRF1BP1Q6BDS2 1440 aa16.5■□□□□ 0.23
TP53-227ENST00000622645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
TP53-227ENST00000622645 FAM135AQ9P2D6 1515 aa16.49■□□□□ 0.23
TP53-227ENST00000622645 BCORL1Q5H9F3 1711 aa16.48■□□□□ 0.23
TP53-227ENST00000622645 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
TP53-227ENST00000622645 POLR1AO95602 1720 aaPredicted RBP16.47■□□□□ 0.23
TP53-227ENST00000622645 KDM5CP41229 1560 aa16.47■□□□□ 0.23
TP53-227ENST00000622645 RALGAPBQ86X10 1494 aa16.46■□□□□ 0.23
TP53-227ENST00000622645 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
TP53-227ENST00000622645 DHX29Q7Z478 1369 aaKnown RBP16.45■□□□□ 0.22
TP53-227ENST00000622645 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
TP53-227ENST00000622645 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
TP53-227ENST00000622645 PLEKHH2Q8IVE3 1493 aa16.43■□□□□ 0.22
TP53-227ENST00000622645 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
TP53-227ENST00000622645 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms