RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 ZFYVE16Q7Z3T8 1539 aa15.21■□□□□ 0.03
TARDBP-227ENST00000622057 ARHGEF40Q8TER5 1519 aa15.21■□□□□ 0.03
TARDBP-227ENST00000622057 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
TARDBP-227ENST00000622057 TROQ12816 1431 aaPredicted RBP15.2■□□□□ 0.02
TARDBP-227ENST00000622057 AFAP1Q8N556 730 aa15.2■□□□□ 0.02
TARDBP-227ENST00000622057 CLIP1P30622 1438 aa15.19■□□□□ 0.02
TARDBP-227ENST00000622057 HSPA2P54652 639 aa15.18■□□□□ 0.02
TARDBP-227ENST00000622057 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
TARDBP-227ENST00000622057 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
TARDBP-227ENST00000622057 ATP10AO60312 1499 aa15.15■□□□□ 0.02
TARDBP-227ENST00000622057 KIF14Q15058 1648 aa15.15■□□□□ 0.02
TARDBP-227ENST00000622057 ARHGAP5Q13017 1502 aa15.15■□□□□ 0.02
TARDBP-227ENST00000622057 PCF11O94913 1555 aaKnown RBP15.14■□□□□ 0.01
TARDBP-227ENST00000622057 LMTK3Q96Q04 1460 aa15.14■□□□□ 0.01
TARDBP-227ENST00000622057 CEBPAP49715 358 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-227ENST00000622057 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
TARDBP-227ENST00000622057 CASKIN1Q8WXD9 1431 aa15.13■□□□□ 0.01
TARDBP-227ENST00000622057 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
TARDBP-227ENST00000622057 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
TARDBP-227ENST00000622057 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-227ENST00000622057 SIGLEC1Q9BZZ2 1709 aa15.12■□□□□ 0.01
TARDBP-227ENST00000622057 ZNF518AQ6AHZ1 1483 aa15.11■□□□□ 0.01
TARDBP-227ENST00000622057 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
TARDBP-227ENST00000622057 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0
TARDBP-227ENST00000622057 ESF1Q9H501 851 aaKnown RBP15.07■□□□□ 0
TARDBP-227ENST00000622057 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
TARDBP-227ENST00000622057 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
TARDBP-227ENST00000622057 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
TARDBP-227ENST00000622057 FER1L4A9Z1Z3 1794 aa15.03■□□□□ -0
TARDBP-227ENST00000622057 CDC42BPBQ9Y5S2 1711 aa15.03■□□□□ -0
TARDBP-227ENST00000622057 KDM5CP41229 1560 aa15.03■□□□□ -0
TARDBP-227ENST00000622057 MLH3Q9UHC1 1453 aa15.03■□□□□ -0
TARDBP-227ENST00000622057 FYCO1Q9BQS8 1478 aa15.02■□□□□ -0
TARDBP-227ENST00000622057 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
TARDBP-227ENST00000622057 SPAG9O60271 1321 aaKnown RBP15□□□□□ -0.01
TARDBP-227ENST00000622057 DIP2CQ9Y2E4 1556 aa15□□□□□ -0.01
TARDBP-227ENST00000622057 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
TARDBP-227ENST00000622057 ABCC1P33527 1531 aa14.99□□□□□ -0.01
TARDBP-227ENST00000622057 GPATCH8Q9UKJ3 1502 aaKnown RBP14.99□□□□□ -0.01
TARDBP-227ENST00000622057 CERKQ8TCT0 537 aa14.99□□□□□ -0.01
TARDBP-227ENST00000622057 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
TARDBP-227ENST00000622057 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
TARDBP-227ENST00000622057 ABCA6Q8N139 1617 aa14.97□□□□□ -0.01
TARDBP-227ENST00000622057 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
TARDBP-227ENST00000622057 UHRF1BP1Q6BDS2 1440 aa14.97□□□□□ -0.01
TARDBP-227ENST00000622057 CDC42BPAQ5VT25 1732 aa14.95□□□□□ -0.02
TARDBP-227ENST00000622057 REREQ9P2R6 1566 aa14.95□□□□□ -0.02
TARDBP-227ENST00000622057 ITSN2Q9NZM3 1697 aa14.95□□□□□ -0.02
TARDBP-227ENST00000622057 AGLP35573 1532 aa14.94□□□□□ -0.02
TARDBP-227ENST00000622057 ZNF644Q9H582 1327 aaPredicted RBP14.93□□□□□ -0.02
TARDBP-227ENST00000622057 GGT6Q6P531 493 aa14.93□□□□□ -0.02
TARDBP-227ENST00000622057 SAMD9LQ8IVG5 1584 aa14.93□□□□□ -0.02
TARDBP-227ENST00000622057 KIDINS220Q9ULH0 1771 aa14.93□□□□□ -0.02
TARDBP-227ENST00000622057 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
TARDBP-227ENST00000622057 PREX1Q8TCU6 1659 aa14.92□□□□□ -0.02
TARDBP-227ENST00000622057 KIAA1107Q9UPP5 1409 aa14.92□□□□□ -0.02
TARDBP-227ENST00000622057 ZMYM3Q14202 1370 aa14.91□□□□□ -0.02
TARDBP-227ENST00000622057 PLEKHH2Q8IVE3 1493 aa14.9□□□□□ -0.02
TARDBP-227ENST00000622057 CNTLNQ9NXG0 1405 aa14.9□□□□□ -0.02
TARDBP-227ENST00000622057 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
TARDBP-227ENST00000622057 CEP162Q5TB80 1403 aa14.88□□□□□ -0.03
TARDBP-227ENST00000622057 C3P01024 1663 aa14.87□□□□□ -0.03
TARDBP-227ENST00000622057 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
TARDBP-227ENST00000622057 A2MP01023 1474 aa14.87□□□□□ -0.03
TARDBP-227ENST00000622057 ATP7AQ04656 1500 aa14.86□□□□□ -0.03
TARDBP-227ENST00000622057 SUPT6HQ7KZ85 1726 aaKnown RBP14.84□□□□□ -0.03
TARDBP-227ENST00000622057 STRCQ7RTU9 1775 aa14.83□□□□□ -0.03
TARDBP-227ENST00000622057 NCKAP5LQ9HCH0 1330 aa14.83□□□□□ -0.04
TARDBP-227ENST00000622057 PTPRTO14522 1441 aa14.83□□□□□ -0.04
TARDBP-227ENST00000622057 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
TARDBP-227ENST00000622057 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
TARDBP-227ENST00000622057 NPATQ14207 1427 aa14.82□□□□□ -0.04
TARDBP-227ENST00000622057 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
TARDBP-227ENST00000622057 TIAM1Q13009 1591 aa14.81□□□□□ -0.04
TARDBP-227ENST00000622057 KIF3BO15066 747 aa14.81□□□□□ -0.04
TARDBP-227ENST00000622057 RSPH4AQ5TD94 716 aa14.81□□□□□ -0.04
TARDBP-227ENST00000622057 TSPY4P0CV99 314 aa14.8□□□□□ -0.04
TARDBP-227ENST00000622057 TSPY10P0CW01 314 aa14.8□□□□□ -0.04
TARDBP-227ENST00000622057 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
TARDBP-227ENST00000622057 RTEL1-TNFRSF6BF6WH68 1400 aa14.79□□□□□ -0.04
TARDBP-227ENST00000622057 NCOA2Q15596 1464 aa14.79□□□□□ -0.04
TARDBP-227ENST00000622057 NCOA1Q15788 1441 aa14.79□□□□□ -0.04
TARDBP-227ENST00000622057 INO80Q9ULG1 1556 aaPredicted RBP14.79□□□□□ -0.04
TARDBP-227ENST00000622057 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.04
TARDBP-227ENST00000622057 PLXNC1O60486 1568 aa14.77□□□□□ -0.04
TARDBP-227ENST00000622057 PTPRKQ15262 1439 aa14.77□□□□□ -0.04
TARDBP-227ENST00000622057 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.05
TARDBP-227ENST00000622057 PKD2Q13563 968 aa14.76□□□□□ -0.05
TARDBP-227ENST00000622057 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
TARDBP-227ENST00000622057 MROH2AA6NES4 1674 aa14.76□□□□□ -0.05
TARDBP-227ENST00000622057 WASHC2CQ9Y4E1 1318 aa14.75□□□□□ -0.05
TARDBP-227ENST00000622057 CCDC141Q6ZP82 1450 aa14.75□□□□□ -0.05
TARDBP-227ENST00000622057 KANK4Q5T7N3 995 aaPredicted RBP14.74□□□□□ -0.05
TARDBP-227ENST00000622057 CAMSAP2Q08AD1 1489 aa14.74□□□□□ -0.05
TARDBP-227ENST00000622057 ZNF335Q9H4Z2 1342 aaPredicted RBP14.73□□□□□ -0.05
TARDBP-227ENST00000622057 ADGBQ8N7X0 1667 aa14.73□□□□□ -0.05
TARDBP-227ENST00000622057 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
TARDBP-227ENST00000622057 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
TARDBP-227ENST00000622057 LRRC9Q6ZRR7 1453 aa14.7□□□□□ -0.06
TARDBP-227ENST00000622057 TNRQ92752 1358 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms