RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 RAPGEF6Q8TEU7 1601 aa17.81■□□□□ 0.44
SCAMP1-207ENST00000621999 FOXD1Q16676 465 aa17.81■□□□□ 0.44
SCAMP1-207ENST00000621999 SIN3AQ96ST3 1273 aa17.8■□□□□ 0.44
SCAMP1-207ENST00000621999 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
SCAMP1-207ENST00000621999 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
SCAMP1-207ENST00000621999 CNGB1Q14028 1251 aaPredicted RBP17.79■□□□□ 0.44
SCAMP1-207ENST00000621999 NUP155O75694 1391 aa17.76■□□□□ 0.43
SCAMP1-207ENST00000621999 RAPGEF3O95398 923 aa17.75■□□□□ 0.43
SCAMP1-207ENST00000621999 PKD2Q13563 968 aa17.75■□□□□ 0.43
SCAMP1-207ENST00000621999 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
SCAMP1-207ENST00000621999 SUPT6HQ7KZ85 1726 aaKnown RBP17.74■□□□□ 0.43
SCAMP1-207ENST00000621999 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
SCAMP1-207ENST00000621999 ASXL2Q76L83 1435 aa17.72■□□□□ 0.43
SCAMP1-207ENST00000621999 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
SCAMP1-207ENST00000621999 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
SCAMP1-207ENST00000621999 KANK1Q14678 1352 aa17.71■□□□□ 0.43
SCAMP1-207ENST00000621999 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
SCAMP1-207ENST00000621999 MAP3K1Q13233 1512 aa17.71■□□□□ 0.43
SCAMP1-207ENST00000621999 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
SCAMP1-207ENST00000621999 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
SCAMP1-207ENST00000621999 ABCC2Q92887 1545 aa17.67■□□□□ 0.42
SCAMP1-207ENST00000621999 SCAPERQ9BY12 1400 aa17.67■□□□□ 0.42
SCAMP1-207ENST00000621999 KIF15Q9NS87 1388 aa17.67■□□□□ 0.42
SCAMP1-207ENST00000621999 KIF14Q15058 1648 aa17.66■□□□□ 0.42
SCAMP1-207ENST00000621999 WASHC2CQ9Y4E1 1318 aa17.66■□□□□ 0.42
SCAMP1-207ENST00000621999 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
SCAMP1-207ENST00000621999 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
SCAMP1-207ENST00000621999 GPATCH8Q9UKJ3 1502 aaKnown RBP17.6■□□□□ 0.41
SCAMP1-207ENST00000621999 PPP1R15AO75807 674 aaPredicted RBP17.59■□□□□ 0.41
SCAMP1-207ENST00000621999 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
SCAMP1-207ENST00000621999 ANKRD50Q9ULJ7 1429 aa17.59■□□□□ 0.41
SCAMP1-207ENST00000621999 DAPK1P53355 1430 aa17.58■□□□□ 0.4
SCAMP1-207ENST00000621999 PLEKHH2Q8IVE3 1493 aa17.58■□□□□ 0.4
SCAMP1-207ENST00000621999 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
SCAMP1-207ENST00000621999 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
SCAMP1-207ENST00000621999 FANCAO15360 1455 aa17.57■□□□□ 0.4
SCAMP1-207ENST00000621999 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
SCAMP1-207ENST00000621999 ADGRL1O94910 1474 aa17.56■□□□□ 0.4
SCAMP1-207ENST00000621999 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
SCAMP1-207ENST00000621999 PTPN23Q9H3S7 1636 aa17.55■□□□□ 0.4
SCAMP1-207ENST00000621999 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
SCAMP1-207ENST00000621999 ABCA8O94911 1581 aa17.54■□□□□ 0.4
SCAMP1-207ENST00000621999 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
SCAMP1-207ENST00000621999 PLCH2O75038 1416 aa17.53■□□□□ 0.4
SCAMP1-207ENST00000621999 DHX57Q6P158 1386 aaKnown RBP17.53■□□□□ 0.4
SCAMP1-207ENST00000621999 ABCC5O15440 1437 aa17.52■□□□□ 0.4
SCAMP1-207ENST00000621999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAMP1-207ENST00000621999 CFAP43Q8NDM7 1665 aa17.5■□□□□ 0.39
SCAMP1-207ENST00000621999 MAGI3Q5TCQ9 1506 aa17.5■□□□□ 0.39
SCAMP1-207ENST00000621999 AKNAQ7Z591 1439 aa17.5■□□□□ 0.39
SCAMP1-207ENST00000621999 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
SCAMP1-207ENST00000621999 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
SCAMP1-207ENST00000621999 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
SCAMP1-207ENST00000621999 KDM5BQ9UGL1 1544 aa17.47■□□□□ 0.39
SCAMP1-207ENST00000621999 UHRF1BP1LA0JNW5 1464 aa17.47■□□□□ 0.39
SCAMP1-207ENST00000621999 HFM1A2PYH4 1435 aa17.46■□□□□ 0.38
SCAMP1-207ENST00000621999 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
SCAMP1-207ENST00000621999 NAIPQ13075 1403 aa17.44■□□□□ 0.38
SCAMP1-207ENST00000621999 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
SCAMP1-207ENST00000621999 DENND4BO75064 1496 aaPredicted RBP17.44■□□□□ 0.38
SCAMP1-207ENST00000621999 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
SCAMP1-207ENST00000621999 CARD11Q9BXL7 1154 aa17.43■□□□□ 0.38
SCAMP1-207ENST00000621999 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
SCAMP1-207ENST00000621999 NCOA1Q15788 1441 aa17.42■□□□□ 0.38
SCAMP1-207ENST00000621999 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
SCAMP1-207ENST00000621999 SYCP2Q9BX26 1530 aa17.41■□□□□ 0.38
SCAMP1-207ENST00000621999 DDX10Q13206 875 aaKnown RBP17.4■□□□□ 0.38
SCAMP1-207ENST00000621999 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
SCAMP1-207ENST00000621999 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.37
SCAMP1-207ENST00000621999 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
SCAMP1-207ENST00000621999 ZCCHC11Q5TAX3 1644 aaKnown RBP17.38■□□□□ 0.37
SCAMP1-207ENST00000621999 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
SCAMP1-207ENST00000621999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAMP1-207ENST00000621999 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
SCAMP1-207ENST00000621999 TEX14Q8IWB6 1497 aa17.35■□□□□ 0.37
SCAMP1-207ENST00000621999 RIMBP3CA6NJZ7 1639 aa17.35■□□□□ 0.37
SCAMP1-207ENST00000621999 RIMBP3BA6NNM3 1639 aa17.35■□□□□ 0.37
SCAMP1-207ENST00000621999 RIMBP3Q9UFD9 1639 aa17.35■□□□□ 0.37
SCAMP1-207ENST00000621999 KIAA1107Q9UPP5 1409 aa17.34■□□□□ 0.37
SCAMP1-207ENST00000621999 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.37
SCAMP1-207ENST00000621999 ABCC10Q5T3U5 1492 aa17.32■□□□□ 0.36
SCAMP1-207ENST00000621999 ANP32CO43423 234 aa17.31■□□□□ 0.36
SCAMP1-207ENST00000621999 STK26Q9P289 416 aa17.31■□□□□ 0.36
SCAMP1-207ENST00000621999 ADCY10Q96PN6 1610 aa17.31■□□□□ 0.36
SCAMP1-207ENST00000621999 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
SCAMP1-207ENST00000621999 TCOF1Q13428 1488 aaKnown RBP17.3■□□□□ 0.36
SCAMP1-207ENST00000621999 ZNF518AQ6AHZ1 1483 aa17.3■□□□□ 0.36
SCAMP1-207ENST00000621999 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCAMP1-207ENST00000621999 POGKQ9P215 609 aa17.28■□□□□ 0.36
SCAMP1-207ENST00000621999 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
SCAMP1-207ENST00000621999 TTC37Q6PGP7 1564 aa17.27■□□□□ 0.36
SCAMP1-207ENST00000621999 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
SCAMP1-207ENST00000621999 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
SCAMP1-207ENST00000621999 TSPOAP1O95153 1857 aa17.25■□□□□ 0.35
SCAMP1-207ENST00000621999 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
SCAMP1-207ENST00000621999 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
SCAMP1-207ENST00000621999 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
SCAMP1-207ENST00000621999 MYO5CQ9NQX4 1742 aa17.22■□□□□ 0.35
SCAMP1-207ENST00000621999 POGZQ7Z3K3 1410 aa17.22■□□□□ 0.35
SCAMP1-207ENST00000621999 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms