RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 KNSTRNQ9Y448 316 aa16.66■□□□□ 0.26
COL1A2-213ENST00000620463 ZRSR1Q15695 479 aaKnown RBP16.65■□□□□ 0.26
COL1A2-213ENST00000620463 SETD5Q9C0A6 1442 aa16.65■□□□□ 0.26
COL1A2-213ENST00000620463 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
COL1A2-213ENST00000620463 RRP9O43818 475 aaKnown RBP16.65■□□□□ 0.26
COL1A2-213ENST00000620463 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
COL1A2-213ENST00000620463 DDX11L8A8MPP1 907 aa16.64■□□□□ 0.25
COL1A2-213ENST00000620463 DRC7Q8IY82 874 aa16.63■□□□□ 0.25
COL1A2-213ENST00000620463 MFAP1P55081 439 aaKnown RBP16.62■□□□□ 0.25
COL1A2-213ENST00000620463 ZNF771Q7L3S4 317 aaPredicted RBP16.62■□□□□ 0.25
COL1A2-213ENST00000620463 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
COL1A2-213ENST00000620463 ZMYND15Q9H091 742 aa16.62■□□□□ 0.25
COL1A2-213ENST00000620463 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.61■□□□□ 0.25
COL1A2-213ENST00000620463 FRAT2O75474 233 aaPredicted RBP16.61■□□□□ 0.25
COL1A2-213ENST00000620463 NRDCO43847 1150 aa16.6■□□□□ 0.25
COL1A2-213ENST00000620463 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
COL1A2-213ENST00000620463 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
COL1A2-213ENST00000620463 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
COL1A2-213ENST00000620463 GOLGA6L6A8MZA4 724 aa16.58■□□□□ 0.25
COL1A2-213ENST00000620463 TPM2P07951 284 aa16.58■□□□□ 0.24
COL1A2-213ENST00000620463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL1A2-213ENST00000620463 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
COL1A2-213ENST00000620463 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
COL1A2-213ENST00000620463 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
COL1A2-213ENST00000620463 RGL3Q3MIN7 710 aa16.57■□□□□ 0.24
COL1A2-213ENST00000620463 CENPQQ7L2Z9 268 aaPredicted RBP16.56■□□□□ 0.24
COL1A2-213ENST00000620463 SOGA1O94964 1423 aa16.56■□□□□ 0.24
COL1A2-213ENST00000620463 PLIN1O60240 522 aa16.56■□□□□ 0.24
COL1A2-213ENST00000620463 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
COL1A2-213ENST00000620463 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
COL1A2-213ENST00000620463 PRKRIP1Q9H875 184 aaPredicted RBP16.56■□□□□ 0.24
COL1A2-213ENST00000620463 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
COL1A2-213ENST00000620463 RBM10P98175 930 aaKnown RBP16.54■□□□□ 0.24
COL1A2-213ENST00000620463 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
COL1A2-213ENST00000620463 MRE11P49959 708 aa16.54■□□□□ 0.24
COL1A2-213ENST00000620463 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
COL1A2-213ENST00000620463 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
COL1A2-213ENST00000620463 SYAP1Q96A49 352 aaPredicted RBP16.53■□□□□ 0.24
COL1A2-213ENST00000620463 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.24
COL1A2-213ENST00000620463 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.24
COL1A2-213ENST00000620463 MTERF4Q7Z6M4 381 aaKnown RBP16.52■□□□□ 0.24
COL1A2-213ENST00000620463 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.23
COL1A2-213ENST00000620463 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.23
COL1A2-213ENST00000620463 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
COL1A2-213ENST00000620463 PLEKHD1A6NEE1 506 aa16.51■□□□□ 0.23
COL1A2-213ENST00000620463 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
COL1A2-213ENST00000620463 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
COL1A2-213ENST00000620463 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
COL1A2-213ENST00000620463 RALBP1Q15311 655 aa16.48■□□□□ 0.23
COL1A2-213ENST00000620463 PMFBP1Q8TBY8 1022 aa16.48■□□□□ 0.23
COL1A2-213ENST00000620463 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
COL1A2-213ENST00000620463 CDCA8Q53HL2 280 aa16.47■□□□□ 0.23
COL1A2-213ENST00000620463 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
COL1A2-213ENST00000620463 CFDP1Q9UEE9 299 aaPredicted RBP16.46■□□□□ 0.22
COL1A2-213ENST00000620463 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.22
COL1A2-213ENST00000620463 CHMP4BQ9H444 224 aaKnown RBP16.45■□□□□ 0.22
COL1A2-213ENST00000620463 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
COL1A2-213ENST00000620463 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
COL1A2-213ENST00000620463 BACH2Q9BYV9 841 aa16.43■□□□□ 0.22
COL1A2-213ENST00000620463 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
COL1A2-213ENST00000620463 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
COL1A2-213ENST00000620463 ESPNB1AK53 854 aa16.42■□□□□ 0.22
COL1A2-213ENST00000620463 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
COL1A2-213ENST00000620463 TRAK2O60296 914 aa16.41■□□□□ 0.22
COL1A2-213ENST00000620463 FOXD1Q16676 465 aa16.4■□□□□ 0.22
COL1A2-213ENST00000620463 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
COL1A2-213ENST00000620463 NASPP49321 788 aaPredicted RBP16.4■□□□□ 0.22
COL1A2-213ENST00000620463 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
COL1A2-213ENST00000620463 MCCP23508 829 aa16.39■□□□□ 0.21
COL1A2-213ENST00000620463 CUX2O14529 1486 aa16.38■□□□□ 0.21
COL1A2-213ENST00000620463 FOXD4L5Q5VV16 416 aaPredicted RBP16.38■□□□□ 0.21
COL1A2-213ENST00000620463 FOXD4L4Q8WXT5 416 aaPredicted RBP16.38■□□□□ 0.21
COL1A2-213ENST00000620463 L3MBTL2Q969R5 705 aa16.38■□□□□ 0.21
COL1A2-213ENST00000620463 PHF14O94880 888 aa16.37■□□□□ 0.21
COL1A2-213ENST00000620463 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
COL1A2-213ENST00000620463 TMF1P82094 1093 aa16.36■□□□□ 0.21
COL1A2-213ENST00000620463 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
COL1A2-213ENST00000620463 PDE4CQ08493 712 aa16.36■□□□□ 0.21
COL1A2-213ENST00000620463 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
COL1A2-213ENST00000620463 APPP05067 770 aa16.34■□□□□ 0.21
COL1A2-213ENST00000620463 POGKQ9P215 609 aa16.34■□□□□ 0.21
COL1A2-213ENST00000620463 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
COL1A2-213ENST00000620463 APBB1O00213 710 aa16.33■□□□□ 0.2
COL1A2-213ENST00000620463 KCNJ4P48050 445 aa16.33■□□□□ 0.2
COL1A2-213ENST00000620463 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
COL1A2-213ENST00000620463 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
COL1A2-213ENST00000620463 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
COL1A2-213ENST00000620463 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
COL1A2-213ENST00000620463 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
COL1A2-213ENST00000620463 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
COL1A2-213ENST00000620463 MYBBP1AQ9BQG0 1328 aaKnown RBP16.31■□□□□ 0.2
COL1A2-213ENST00000620463 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
COL1A2-213ENST00000620463 FGD1P98174 961 aa16.3■□□□□ 0.2
COL1A2-213ENST00000620463 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
COL1A2-213ENST00000620463 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
COL1A2-213ENST00000620463 GOLGA6L1Q8N7Z2 621 aa16.3■□□□□ 0.2
COL1A2-213ENST00000620463 ZNF592Q92610 1267 aa16.3■□□□□ 0.2
COL1A2-213ENST00000620463 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
COL1A2-213ENST00000620463 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
COL1A2-213ENST00000620463 UQCRHP07919 91 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms