RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 IL27Q8NEV9 243 aa23.35■■□□□ 1.33
LHX3-203ENST00000619587 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
LHX3-203ENST00000619587 UGGT2Q9NYU1 1516 aa23.32■■□□□ 1.32
LHX3-203ENST00000619587 EHBP1L1Q8N3D4 1523 aa23.31■■□□□ 1.32
LHX3-203ENST00000619587 MAGI3Q5TCQ9 1506 aa23.3■■□□□ 1.32
LHX3-203ENST00000619587 SPATA31E1Q6ZUB1 1445 aa23.3■■□□□ 1.32
LHX3-203ENST00000619587 ABCA10Q8WWZ4 1543 aa23.29■■□□□ 1.32
LHX3-203ENST00000619587 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
LHX3-203ENST00000619587 POLR1AO95602 1720 aaPredicted RBP23.29■■□□□ 1.32
LHX3-203ENST00000619587 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
LHX3-203ENST00000619587 RTN4Q9NQC3 1192 aaKnown RBP23.28■■□□□ 1.32
LHX3-203ENST00000619587 CUL7Q14999 1698 aa23.28■■□□□ 1.32
LHX3-203ENST00000619587 NPM2Q86SE8 214 aaKnown RBP23.28■■□□□ 1.32
LHX3-203ENST00000619587 DHX29Q7Z478 1369 aaKnown RBP23.27■■□□□ 1.31
LHX3-203ENST00000619587 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
LHX3-203ENST00000619587 SAMD9Q5K651 1589 aa23.26■■□□□ 1.31
LHX3-203ENST00000619587 TEX14Q8IWB6 1497 aa23.26■■□□□ 1.31
LHX3-203ENST00000619587 POLR3GLQ9BT43 218 aa23.26■■□□□ 1.31
LHX3-203ENST00000619587 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
LHX3-203ENST00000619587 TCOF1Q13428 1488 aaKnown RBP23.24■■□□□ 1.31
LHX3-203ENST00000619587 RPRD2Q5VT52 1461 aaKnown RBP23.23■■□□□ 1.31
LHX3-203ENST00000619587 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
LHX3-203ENST00000619587 ANKRD30BQ9BXX2 1392 aa23.23■■□□□ 1.31
LHX3-203ENST00000619587 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
LHX3-203ENST00000619587 THOC2Q8NI27 1593 aaKnown RBP23.2■■□□□ 1.3
LHX3-203ENST00000619587 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
LHX3-203ENST00000619587 TOPBP1Q92547 1522 aa23.17■■□□□ 1.3
LHX3-203ENST00000619587 NEFMP07197 916 aa23.16■■□□□ 1.3
LHX3-203ENST00000619587 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
LHX3-203ENST00000619587 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
LHX3-203ENST00000619587 EXOC6Q8TAG9 804 aa23.14■■□□□ 1.29
LHX3-203ENST00000619587 PDE4AP27815 886 aa23.11■■□□□ 1.29
LHX3-203ENST00000619587 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
LHX3-203ENST00000619587 SLC4A1APQ9BWU0 796 aaKnown RBP23.11■■□□□ 1.29
LHX3-203ENST00000619587 TMC1Q8TDI8 760 aa23.1■■□□□ 1.29
LHX3-203ENST00000619587 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
LHX3-203ENST00000619587 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.1■■□□□ 1.29
LHX3-203ENST00000619587 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
LHX3-203ENST00000619587 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
LHX3-203ENST00000619587 USP47Q96K76 1375 aa23.08■■□□□ 1.29
LHX3-203ENST00000619587 TCERG1O14776 1098 aaKnown RBP23.07■■□□□ 1.28
LHX3-203ENST00000619587 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
LHX3-203ENST00000619587 BACH2Q9BYV9 841 aa23.05■■□□□ 1.28
LHX3-203ENST00000619587 CDK13Q14004 1512 aaKnown RBP23.05■■□□□ 1.28
LHX3-203ENST00000619587 USP35Q9P2H5 1018 aa23.03■■□□□ 1.28
LHX3-203ENST00000619587 EPRSP07814 1512 aaKnown RBP23.01■■□□□ 1.27
LHX3-203ENST00000619587 DAPK1P53355 1430 aa23.01■■□□□ 1.27
LHX3-203ENST00000619587 WASHC2CQ9Y4E1 1318 aa23.01■■□□□ 1.27
LHX3-203ENST00000619587 SKAP1Q86WV1 359 aa23.01■■□□□ 1.27
LHX3-203ENST00000619587 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
LHX3-203ENST00000619587 RCAN3Q9UKA8 241 aa23■■□□□ 1.27
LHX3-203ENST00000619587 LRPPRCP42704 1394 aaKnown RBP23■■□□□ 1.27
LHX3-203ENST00000619587 ZNF644Q9H582 1327 aaPredicted RBP22.99■■□□□ 1.27
LHX3-203ENST00000619587 NESP48681 1621 aa22.99■■□□□ 1.27
LHX3-203ENST00000619587 MBD5Q9P267 1494 aa22.99■■□□□ 1.27
LHX3-203ENST00000619587 UBE2Q2Q8WVN8 375 aa22.98■■□□□ 1.27
LHX3-203ENST00000619587 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
LHX3-203ENST00000619587 ABCC5O15440 1437 aa22.97■■□□□ 1.27
LHX3-203ENST00000619587 KDM5CP41229 1560 aa22.97■■□□□ 1.27
LHX3-203ENST00000619587 PPM1GO15355 546 aaPredicted RBP22.96■■□□□ 1.27
LHX3-203ENST00000619587 BRPF3Q9ULD4 1205 aa22.96■■□□□ 1.27
LHX3-203ENST00000619587 PZPP20742 1482 aa22.95■■□□□ 1.26
LHX3-203ENST00000619587 MS4A1P11836 297 aa22.95■■□□□ 1.26
LHX3-203ENST00000619587 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
LHX3-203ENST00000619587 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
LHX3-203ENST00000619587 DNMT1P26358 1616 aaKnown RBP22.92■■□□□ 1.26
LHX3-203ENST00000619587 KIF15Q9NS87 1388 aa22.92■■□□□ 1.26
LHX3-203ENST00000619587 KIF14Q15058 1648 aa22.91■■□□□ 1.26
LHX3-203ENST00000619587 ARID4BQ4LE39 1312 aaPredicted RBP22.91■■□□□ 1.26
LHX3-203ENST00000619587 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
LHX3-203ENST00000619587 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
LHX3-203ENST00000619587 PLIN1O60240 522 aa22.9■■□□□ 1.26
LHX3-203ENST00000619587 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.25
LHX3-203ENST00000619587 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
LHX3-203ENST00000619587 ROCK2O75116 1388 aaKnown RBP22.88■■□□□ 1.25
LHX3-203ENST00000619587 SLC4A3P48751 1232 aa22.87■■□□□ 1.25
LHX3-203ENST00000619587 GSE1Q14687 1217 aa22.85■■□□□ 1.25
LHX3-203ENST00000619587 WDR62O43379 1518 aa22.85■■□□□ 1.25
LHX3-203ENST00000619587 CARD11Q9BXL7 1154 aa22.85■■□□□ 1.25
LHX3-203ENST00000619587 NFKBIBQ15653 356 aa22.84■■□□□ 1.25
LHX3-203ENST00000619587 KIAA1107Q9UPP5 1409 aa22.84■■□□□ 1.25
LHX3-203ENST00000619587 PKD2Q13563 968 aa22.84■■□□□ 1.25
LHX3-203ENST00000619587 ST20-MTHFSA0A0A6YYL1 179 aa22.83■■□□□ 1.24
LHX3-203ENST00000619587 RALBP1Q15311 655 aa22.83■■□□□ 1.24
LHX3-203ENST00000619587 CRBNQ96SW2 442 aa22.82■■□□□ 1.24
LHX3-203ENST00000619587 DDRGK1Q96HY6 314 aa22.81■■□□□ 1.24
LHX3-203ENST00000619587 FRAT1Q92837 279 aaPredicted RBP22.8■■□□□ 1.24
LHX3-203ENST00000619587 RALGAPBQ86X10 1494 aa22.8■■□□□ 1.24
LHX3-203ENST00000619587 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
LHX3-203ENST00000619587 EIF5BO60841 1220 aaKnown RBP22.77■■□□□ 1.24
LHX3-203ENST00000619587 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.24
LHX3-203ENST00000619587 IQGAP2Q13576 1575 aa22.77■■□□□ 1.23
LHX3-203ENST00000619587 NLRP13Q86W25 1043 aa22.75■■□□□ 1.23
LHX3-203ENST00000619587 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
LHX3-203ENST00000619587 E9PCH4 1651 aa22.75■■□□□ 1.23
LHX3-203ENST00000619587 UHRF1BP1Q6BDS2 1440 aa22.75■■□□□ 1.23
LHX3-203ENST00000619587 C20orf194Q5TEA3 1177 aa22.73■■□□□ 1.23
LHX3-203ENST00000619587 PARD3Q8TEW0 1356 aa22.71■■□□□ 1.23
LHX3-203ENST00000619587 CAMSAP2Q08AD1 1489 aa22.69■■□□□ 1.22
LHX3-203ENST00000619587 DAXXQ9UER7 740 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms