RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 DHX29Q7Z478 1369 aaKnown RBP20.21■□□□□ 0.83
SRRT-217ENST00000618411 MS4A1P11836 297 aa20.21■□□□□ 0.83
SRRT-217ENST00000618411 NBPF8Q3BBV2 869 aa20.21■□□□□ 0.83
SRRT-217ENST00000618411 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
SRRT-217ENST00000618411 PDE4AP27815 886 aa20.2■□□□□ 0.83
SRRT-217ENST00000618411 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.83
SRRT-217ENST00000618411 LAS1LQ9Y4W2 734 aaKnown RBP20.2■□□□□ 0.83
SRRT-217ENST00000618411 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
SRRT-217ENST00000618411 UBE2Q2Q8WVN8 375 aa20.2■□□□□ 0.82
SRRT-217ENST00000618411 BACH2Q9BYV9 841 aa20.19■□□□□ 0.82
SRRT-217ENST00000618411 TCOF1Q13428 1488 aaKnown RBP20.19■□□□□ 0.82
SRRT-217ENST00000618411 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
SRRT-217ENST00000618411 THOC2Q8NI27 1593 aaKnown RBP20.18■□□□□ 0.82
SRRT-217ENST00000618411 UGGT2Q9NYU1 1516 aa20.18■□□□□ 0.82
SRRT-217ENST00000618411 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
SRRT-217ENST00000618411 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
SRRT-217ENST00000618411 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
SRRT-217ENST00000618411 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
SRRT-217ENST00000618411 PNISRQ8TF01 805 aaKnown RBP20.16■□□□□ 0.82
SRRT-217ENST00000618411 ANKRD30BQ9BXX2 1392 aa20.15■□□□□ 0.82
SRRT-217ENST00000618411 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
SRRT-217ENST00000618411 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
SRRT-217ENST00000618411 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
SRRT-217ENST00000618411 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
SRRT-217ENST00000618411 KDM6BO15054 1643 aa20.14■□□□□ 0.82
SRRT-217ENST00000618411 CUL7Q14999 1698 aa20.14■□□□□ 0.81
SRRT-217ENST00000618411 RRP1P56182 461 aaKnown RBP20.13■□□□□ 0.81
SRRT-217ENST00000618411 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
SRRT-217ENST00000618411 GSE1Q14687 1217 aa20.11■□□□□ 0.81
SRRT-217ENST00000618411 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
SRRT-217ENST00000618411 ARID4BQ4LE39 1312 aaPredicted RBP20.11■□□□□ 0.81
SRRT-217ENST00000618411 SAMD9Q5K651 1589 aa20.1■□□□□ 0.81
SRRT-217ENST00000618411 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
SRRT-217ENST00000618411 EXOC6Q8TAG9 804 aa20.1■□□□□ 0.81
SRRT-217ENST00000618411 FOXD1Q16676 465 aa20.09■□□□□ 0.81
SRRT-217ENST00000618411 TMC1Q8TDI8 760 aa20.09■□□□□ 0.81
SRRT-217ENST00000618411 LRPPRCP42704 1394 aaKnown RBP20.07■□□□□ 0.8
SRRT-217ENST00000618411 BRPF3Q9ULD4 1205 aa20.06■□□□□ 0.8
SRRT-217ENST00000618411 RCAN3Q9UKA8 241 aa20.05■□□□□ 0.8
SRRT-217ENST00000618411 ROCK2O75116 1388 aaKnown RBP20.03■□□□□ 0.8
SRRT-217ENST00000618411 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
SRRT-217ENST00000618411 BCORL1Q5H9F3 1711 aa20.02■□□□□ 0.8
SRRT-217ENST00000618411 NFKBIBQ15653 356 aa20.01■□□□□ 0.79
SRRT-217ENST00000618411 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
SRRT-217ENST00000618411 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
SRRT-217ENST00000618411 USP47Q96K76 1375 aa20■□□□□ 0.79
SRRT-217ENST00000618411 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
SRRT-217ENST00000618411 ROCK1Q13464 1354 aa20■□□□□ 0.79
SRRT-217ENST00000618411 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
SRRT-217ENST00000618411 PDE3BQ13370 1112 aa20■□□□□ 0.79
SRRT-217ENST00000618411 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
SRRT-217ENST00000618411 KIF15Q9NS87 1388 aa19.97■□□□□ 0.79
SRRT-217ENST00000618411 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
SRRT-217ENST00000618411 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
SRRT-217ENST00000618411 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
SRRT-217ENST00000618411 MBD5Q9P267 1494 aa19.96■□□□□ 0.79
SRRT-217ENST00000618411 SLC4A1APQ9BWU0 796 aaKnown RBP19.96■□□□□ 0.79
SRRT-217ENST00000618411 FRAT1Q92837 279 aaPredicted RBP19.95■□□□□ 0.78
SRRT-217ENST00000618411 MYBBP1AQ9BQG0 1328 aaKnown RBP19.95■□□□□ 0.78
SRRT-217ENST00000618411 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
SRRT-217ENST00000618411 RALBP1Q15311 655 aa19.94■□□□□ 0.78
SRRT-217ENST00000618411 KDM5CP41229 1560 aa19.93■□□□□ 0.78
SRRT-217ENST00000618411 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
SRRT-217ENST00000618411 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
SRRT-217ENST00000618411 RSPH6AQ9H0K4 717 aa19.92■□□□□ 0.78
SRRT-217ENST00000618411 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
SRRT-217ENST00000618411 KIF14Q15058 1648 aa19.9■□□□□ 0.78
SRRT-217ENST00000618411 DAPK1P53355 1430 aa19.89■□□□□ 0.77
SRRT-217ENST00000618411 FAM43AQ8N2R8 423 aa19.89■□□□□ 0.77
SRRT-217ENST00000618411 TOPBP1Q92547 1522 aa19.89■□□□□ 0.77
SRRT-217ENST00000618411 EPRSP07814 1512 aaKnown RBP19.85■□□□□ 0.77
SRRT-217ENST00000618411 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
SRRT-217ENST00000618411 ABCC5O15440 1437 aa19.84■□□□□ 0.77
SRRT-217ENST00000618411 PZPP20742 1482 aa19.84■□□□□ 0.77
SRRT-217ENST00000618411 UHRF1BP1Q6BDS2 1440 aa19.83■□□□□ 0.76
SRRT-217ENST00000618411 NLRP13Q86W25 1043 aa19.83■□□□□ 0.76
SRRT-217ENST00000618411 NESP48681 1621 aa19.83■□□□□ 0.76
SRRT-217ENST00000618411 SLC4A3P48751 1232 aa19.82■□□□□ 0.76
SRRT-217ENST00000618411 CRBNQ96SW2 442 aa19.82■□□□□ 0.76
SRRT-217ENST00000618411 RALGAPBQ86X10 1494 aa19.82■□□□□ 0.76
SRRT-217ENST00000618411 ZNF326Q5BKZ1 582 aaKnown RBP19.81■□□□□ 0.76
SRRT-217ENST00000618411 KIAA1107Q9UPP5 1409 aa19.81■□□□□ 0.76
SRRT-217ENST00000618411 INSRP06213 1382 aa19.8■□□□□ 0.76
SRRT-217ENST00000618411 KDM2BQ8NHM5 1336 aa19.79■□□□□ 0.76
SRRT-217ENST00000618411 PLIN1O60240 522 aa19.79■□□□□ 0.76
SRRT-217ENST00000618411 FAM161AQ3B820 660 aa19.79■□□□□ 0.76
SRRT-217ENST00000618411 CDCA7LQ96GN5 454 aa19.79■□□□□ 0.76
SRRT-217ENST00000618411 SKAP1Q86WV1 359 aa19.78■□□□□ 0.76
SRRT-217ENST00000618411 E9PCH4 1651 aa19.78■□□□□ 0.76
SRRT-217ENST00000618411 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.76
SRRT-217ENST00000618411 CENPQQ7L2Z9 268 aaPredicted RBP19.77■□□□□ 0.76
SRRT-217ENST00000618411 PARD3Q8TEW0 1356 aa19.77■□□□□ 0.76
SRRT-217ENST00000618411 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.75
SRRT-217ENST00000618411 CARD11Q9BXL7 1154 aa19.77■□□□□ 0.75
SRRT-217ENST00000618411 CDK13Q14004 1512 aaKnown RBP19.75■□□□□ 0.75
SRRT-217ENST00000618411 C8orf34Q49A92 452 aa19.74■□□□□ 0.75
SRRT-217ENST00000618411 DCAF11Q8TEB1 546 aa19.74■□□□□ 0.75
SRRT-217ENST00000618411 ST20-MTHFSA0A0A6YYL1 179 aa19.73■□□□□ 0.75
SRRT-217ENST00000618411 GAPVD1Q14C86 1478 aa19.72■□□□□ 0.75
SRRT-217ENST00000618411 PLEKHH2Q8IVE3 1493 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms