RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 KIF14Q15058 1648 aa17.7■□□□□ 0.42
SRRT-216ENST00000618262 KDM5BQ9UGL1 1544 aa17.7■□□□□ 0.42
SRRT-216ENST00000618262 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
SRRT-216ENST00000618262 CFDP1Q9UEE9 299 aaPredicted RBP17.69■□□□□ 0.42
SRRT-216ENST00000618262 TROQ12816 1431 aaPredicted RBP17.69■□□□□ 0.42
SRRT-216ENST00000618262 CHIC2Q9UKJ5 165 aa17.68■□□□□ 0.42
SRRT-216ENST00000618262 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
SRRT-216ENST00000618262 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
SRRT-216ENST00000618262 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
SRRT-216ENST00000618262 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
SRRT-216ENST00000618262 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.41
SRRT-216ENST00000618262 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
SRRT-216ENST00000618262 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
SRRT-216ENST00000618262 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
SRRT-216ENST00000618262 TTC37Q6PGP7 1564 aa17.58■□□□□ 0.4
SRRT-216ENST00000618262 MAP3K1Q13233 1512 aa17.58■□□□□ 0.4
SRRT-216ENST00000618262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.45e-6■■■■□ 19.7
SRRT-216ENST00000618262 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
SRRT-216ENST00000618262 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
SRRT-216ENST00000618262 GPATCH8Q9UKJ3 1502 aaKnown RBP17.55■□□□□ 0.4
SRRT-216ENST00000618262 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
SRRT-216ENST00000618262 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
SRRT-216ENST00000618262 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
SRRT-216ENST00000618262 FGD6Q6ZV73 1430 aa17.54■□□□□ 0.4
SRRT-216ENST00000618262 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
SRRT-216ENST00000618262 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
SRRT-216ENST00000618262 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
SRRT-216ENST00000618262 TSPOAP1O95153 1857 aa17.52■□□□□ 0.4
SRRT-216ENST00000618262 PDIA4P13667 645 aaKnown RBP17.52■□□□□ 0.39
SRRT-216ENST00000618262 ABCC10Q5T3U5 1492 aa17.51■□□□□ 0.39
SRRT-216ENST00000618262 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
SRRT-216ENST00000618262 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
SRRT-216ENST00000618262 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
SRRT-216ENST00000618262 FANCAO15360 1455 aa17.45■□□□□ 0.38
SRRT-216ENST00000618262 TULP1O00294 542 aaPredicted RBP17.44■□□□□ 0.38
SRRT-216ENST00000618262 PLCH2O75038 1416 aa17.44■□□□□ 0.38
SRRT-216ENST00000618262 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
SRRT-216ENST00000618262 CDC42BPAQ5VT25 1732 aa17.44■□□□□ 0.38
SRRT-216ENST00000618262 CAMSAP2Q08AD1 1489 aa17.43■□□□□ 0.38
SRRT-216ENST00000618262 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
SRRT-216ENST00000618262 RRBP1Q9P2E9 1410 aaKnown RBP17.42■□□□□ 0.38
SRRT-216ENST00000618262 PDE4CQ08493 712 aa17.42■□□□□ 0.38
SRRT-216ENST00000618262 DIP2BQ9P265 1576 aa17.41■□□□□ 0.38
SRRT-216ENST00000618262 NEFLP07196 543 aa17.4■□□□□ 0.38
SRRT-216ENST00000618262 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
SRRT-216ENST00000618262 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
SRRT-216ENST00000618262 CDC42BPBQ9Y5S2 1711 aa17.4■□□□□ 0.38
SRRT-216ENST00000618262 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
SRRT-216ENST00000618262 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
SRRT-216ENST00000618262 TRAPPC8Q9Y2L5 1435 aa17.39■□□□□ 0.37
SRRT-216ENST00000618262 ARHGEF12Q9NZN5 1544 aa17.39■□□□□ 0.37
SRRT-216ENST00000618262 MYO5CQ9NQX4 1742 aa17.37■□□□□ 0.37
SRRT-216ENST00000618262 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
SRRT-216ENST00000618262 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
SRRT-216ENST00000618262 SAMD9LQ8IVG5 1584 aa17.36■□□□□ 0.37
SRRT-216ENST00000618262 ABCA9Q8IUA7 1624 aa17.36■□□□□ 0.37
SRRT-216ENST00000618262 MIA2Q96PC5 1412 aa17.35■□□□□ 0.37
SRRT-216ENST00000618262 ABCC5O15440 1437 aa17.35■□□□□ 0.37
SRRT-216ENST00000618262 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
SRRT-216ENST00000618262 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
SRRT-216ENST00000618262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.371e-7■■■□□ 18.8
SRRT-216ENST00000618262 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.37
SRRT-216ENST00000618262 DAPK1P53355 1430 aa17.33■□□□□ 0.36
SRRT-216ENST00000618262 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
SRRT-216ENST00000618262 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
SRRT-216ENST00000618262 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
SRRT-216ENST00000618262 TRIM52Q96A61 297 aa17.31■□□□□ 0.36
SRRT-216ENST00000618262 HOMEZQ8IX15 550 aa17.31■□□□□ 0.36
SRRT-216ENST00000618262 COL17A1Q9UMD9 1497 aaPredicted RBP17.3■□□□□ 0.36
SRRT-216ENST00000618262 MBD5Q9P267 1494 aa17.29■□□□□ 0.36
SRRT-216ENST00000618262 MLECQ14165 292 aa17.29■□□□□ 0.36
SRRT-216ENST00000618262 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.35
SRRT-216ENST00000618262 C9orf84Q5VXU9 1444 aa17.27■□□□□ 0.35
SRRT-216ENST00000618262 MAP3K4Q9Y6R4 1608 aa17.27■□□□□ 0.35
SRRT-216ENST00000618262 FOXD1Q16676 465 aa17.25■□□□□ 0.35
SRRT-216ENST00000618262 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
SRRT-216ENST00000618262 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
SRRT-216ENST00000618262 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
SRRT-216ENST00000618262 ABCC1P33527 1531 aa17.23■□□□□ 0.35
SRRT-216ENST00000618262 GGT6Q6P531 493 aa17.22■□□□□ 0.35
SRRT-216ENST00000618262 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
SRRT-216ENST00000618262 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
SRRT-216ENST00000618262 GLI2P10070 1586 aa17.22■□□□□ 0.35
SRRT-216ENST00000618262 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
SRRT-216ENST00000618262 PPRC1Q5VV67 1664 aaKnown RBP17.21■□□□□ 0.35
SRRT-216ENST00000618262 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
SRRT-216ENST00000618262 KIF3BO15066 747 aa17.21■□□□□ 0.35
SRRT-216ENST00000618262 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
SRRT-216ENST00000618262 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
SRRT-216ENST00000618262 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
SRRT-216ENST00000618262 KDM6BO15054 1643 aa17.19■□□□□ 0.34
SRRT-216ENST00000618262 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
SRRT-216ENST00000618262 NAIPQ13075 1403 aa17.18■□□□□ 0.34
SRRT-216ENST00000618262 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
SRRT-216ENST00000618262 KIAA1107Q9UPP5 1409 aa17.18■□□□□ 0.34
SRRT-216ENST00000618262 SETD5Q9C0A6 1442 aa17.18■□□□□ 0.34
SRRT-216ENST00000618262 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
SRRT-216ENST00000618262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.17■□□□□ 0.34
SRRT-216ENST00000618262 NEO1Q92859 1461 aa17.17■□□□□ 0.34
SRRT-216ENST00000618262 ZNF518AQ6AHZ1 1483 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms