RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
CYFIP1-207ENST00000617556 CUX1P39880 1505 aa16.11■□□□□ 0.17
CYFIP1-207ENST00000617556 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
CYFIP1-207ENST00000617556 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
CYFIP1-207ENST00000617556 PLEKHG5O94827 1062 aa16.08■□□□□ 0.17
CYFIP1-207ENST00000617556 SRPK2P78362 688 aaKnown RBP16.08■□□□□ 0.17
CYFIP1-207ENST00000617556 CASKIN1Q8WXD9 1431 aa16.08■□□□□ 0.16
CYFIP1-207ENST00000617556 HSP90AA1P07900 732 aaKnown RBP16.08■□□□□ 0.16
CYFIP1-207ENST00000617556 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
CYFIP1-207ENST00000617556 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
CYFIP1-207ENST00000617556 L3MBTL2Q969R5 705 aa16.07■□□□□ 0.16
CYFIP1-207ENST00000617556 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
CYFIP1-207ENST00000617556 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
CYFIP1-207ENST00000617556 DNMBPQ6XZF7 1577 aa16.06■□□□□ 0.16
CYFIP1-207ENST00000617556 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
CYFIP1-207ENST00000617556 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
CYFIP1-207ENST00000617556 TNNT2P45379 298 aaPredicted RBP16.05■□□□□ 0.16
CYFIP1-207ENST00000617556 LRRC9Q6ZRR7 1453 aa16.05■□□□□ 0.16
CYFIP1-207ENST00000617556 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
CYFIP1-207ENST00000617556 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
CYFIP1-207ENST00000617556 PRXQ9BXM0 1461 aa16.04■□□□□ 0.16
CYFIP1-207ENST00000617556 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
CYFIP1-207ENST00000617556 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
CYFIP1-207ENST00000617556 EFCAB5A4FU69 1503 aa16.03■□□□□ 0.16
CYFIP1-207ENST00000617556 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
CYFIP1-207ENST00000617556 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
CYFIP1-207ENST00000617556 FYCO1Q9BQS8 1478 aa16.02■□□□□ 0.16
CYFIP1-207ENST00000617556 PRDM2Q13029 1718 aa16.02■□□□□ 0.16
CYFIP1-207ENST00000617556 STK26Q9P289 416 aa16.01■□□□□ 0.15
CYFIP1-207ENST00000617556 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
CYFIP1-207ENST00000617556 SAFB2Q14151 953 aaKnown RBP eCLIP16.01■□□□□ 0.15
CYFIP1-207ENST00000617556 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
CYFIP1-207ENST00000617556 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
CYFIP1-207ENST00000617556 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
CYFIP1-207ENST00000617556 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
CYFIP1-207ENST00000617556 RALBP1Q15311 655 aa15.99■□□□□ 0.15
CYFIP1-207ENST00000617556 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
CYFIP1-207ENST00000617556 FTSJ3Q8IY81 847 aaKnown RBP15.98■□□□□ 0.15
CYFIP1-207ENST00000617556 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
CYFIP1-207ENST00000617556 A0A0G2JS52 829 aa15.98■□□□□ 0.15
CYFIP1-207ENST00000617556 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
CYFIP1-207ENST00000617556 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
CYFIP1-207ENST00000617556 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
CYFIP1-207ENST00000617556 LAS1LQ9Y4W2 734 aaKnown RBP15.96■□□□□ 0.15
CYFIP1-207ENST00000617556 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
CYFIP1-207ENST00000617556 CYB5RLQ6IPT4 315 aa15.96■□□□□ 0.15
CYFIP1-207ENST00000617556 MS4A1P11836 297 aa15.94■□□□□ 0.14
CYFIP1-207ENST00000617556 PPP4R2Q9NY27 417 aa15.93■□□□□ 0.14
CYFIP1-207ENST00000617556 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
CYFIP1-207ENST00000617556 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
CYFIP1-207ENST00000617556 PRG4Q92954 1404 aaPredicted RBP15.92■□□□□ 0.14
CYFIP1-207ENST00000617556 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
CYFIP1-207ENST00000617556 ABCA10Q8WWZ4 1543 aa15.92■□□□□ 0.14
CYFIP1-207ENST00000617556 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
CYFIP1-207ENST00000617556 EID1Q9Y6B2 187 aa15.91■□□□□ 0.14
CYFIP1-207ENST00000617556 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
CYFIP1-207ENST00000617556 ZNF644Q9H582 1327 aaPredicted RBP15.89■□□□□ 0.13
CYFIP1-207ENST00000617556 FRAT1Q92837 279 aaPredicted RBP15.88■□□□□ 0.13
CYFIP1-207ENST00000617556 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
CYFIP1-207ENST00000617556 TERF2IPQ9NYB0 399 aa15.87■□□□□ 0.13
CYFIP1-207ENST00000617556 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
CYFIP1-207ENST00000617556 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
CYFIP1-207ENST00000617556 EIF5BO60841 1220 aaKnown RBP15.86■□□□□ 0.13
CYFIP1-207ENST00000617556 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
CYFIP1-207ENST00000617556 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
CYFIP1-207ENST00000617556 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
CYFIP1-207ENST00000617556 SOX12O15370 315 aa15.84■□□□□ 0.13
CYFIP1-207ENST00000617556 BECN1Q14457 450 aa15.84■□□□□ 0.13
CYFIP1-207ENST00000617556 ARHGAP5Q13017 1502 aa15.84■□□□□ 0.13
CYFIP1-207ENST00000617556 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
CYFIP1-207ENST00000617556 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.13
CYFIP1-207ENST00000617556 CUL7Q14999 1698 aa15.83■□□□□ 0.12
CYFIP1-207ENST00000617556 ST20-MTHFSA0A0A6YYL1 179 aa15.83■□□□□ 0.12
CYFIP1-207ENST00000617556 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
CYFIP1-207ENST00000617556 NLRP13Q86W25 1043 aa15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 CASC1Q6TDU7 716 aa15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 TRAK1Q9UPV9 953 aa15.81■□□□□ 0.12
CYFIP1-207ENST00000617556 USP47Q96K76 1375 aa15.8■□□□□ 0.12
CYFIP1-207ENST00000617556 CALD1Q05682 793 aaKnown RBP15.8■□□□□ 0.12
CYFIP1-207ENST00000617556 STAC3Q96MF2 364 aa15.8■□□□□ 0.12
CYFIP1-207ENST00000617556 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
CYFIP1-207ENST00000617556 TROQ12816 1431 aaPredicted RBP15.79■□□□□ 0.12
CYFIP1-207ENST00000617556 ARXQ96QS3 562 aa15.78■□□□□ 0.12
CYFIP1-207ENST00000617556 PAK3O75914 559 aaPredicted RBP15.78■□□□□ 0.12
CYFIP1-207ENST00000617556 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
CYFIP1-207ENST00000617556 IQGAP2Q13576 1575 aa15.77■□□□□ 0.11
CYFIP1-207ENST00000617556 ERICH6BQ5W0A0 696 aa15.75■□□□□ 0.11
CYFIP1-207ENST00000617556 MYBBP1AQ9BQG0 1328 aaKnown RBP15.75■□□□□ 0.11
CYFIP1-207ENST00000617556 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
CYFIP1-207ENST00000617556 EVC2Q86UK5 1308 aa15.74■□□□□ 0.11
CYFIP1-207ENST00000617556 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
CYFIP1-207ENST00000617556 PANK3Q9H999 370 aa15.74■□□□□ 0.11
CYFIP1-207ENST00000617556 IPO8O15397 1037 aaKnown RBP15.73■□□□□ 0.11
CYFIP1-207ENST00000617556 RGS3P49796 1198 aa15.73■□□□□ 0.11
CYFIP1-207ENST00000617556 B4GALNT3Q6L9W6 998 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms