RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.13■■□□□ 1.13
NOP56-220ENST00000616692 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
NOP56-220ENST00000616692 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
NOP56-220ENST00000616692 PTPRMP28827 1452 aa22.11■■□□□ 1.13
NOP56-220ENST00000616692 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
NOP56-220ENST00000616692 FHOD3Q2V2M9 1422 aa22.09■■□□□ 1.13
NOP56-220ENST00000616692 ARHGEF40Q8TER5 1519 aa22.08■■□□□ 1.13
NOP56-220ENST00000616692 ZMYM4Q5VZL5 1548 aa22.07■■□□□ 1.12
NOP56-220ENST00000616692 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
NOP56-220ENST00000616692 DENND4BO75064 1496 aaPredicted RBP22.06■■□□□ 1.12
NOP56-220ENST00000616692 MAGI2Q86UL8 1455 aa22.05■■□□□ 1.12
NOP56-220ENST00000616692 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
NOP56-220ENST00000616692 RICTORQ6R327 1708 aa22.03■■□□□ 1.12
NOP56-220ENST00000616692 AKNAQ7Z591 1439 aa22.02■■□□□ 1.12
NOP56-220ENST00000616692 PDIA4P13667 645 aaKnown RBP22.02■■□□□ 1.11
NOP56-220ENST00000616692 KLHL34Q8N239 644 aa22.02■■□□□ 1.11
NOP56-220ENST00000616692 PDE4CQ08493 712 aa22.01■■□□□ 1.11
NOP56-220ENST00000616692 POGZQ7Z3K3 1410 aa22.01■■□□□ 1.11
NOP56-220ENST00000616692 RAPGEF3O95398 923 aa22■■□□□ 1.11
NOP56-220ENST00000616692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.99■■□□□ 1.11
NOP56-220ENST00000616692 FANCAO15360 1455 aa21.98■■□□□ 1.11
NOP56-220ENST00000616692 PCF11O94913 1555 aaKnown RBP21.98■■□□□ 1.11
NOP56-220ENST00000616692 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
NOP56-220ENST00000616692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
NOP56-220ENST00000616692 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
NOP56-220ENST00000616692 FBXO41Q8TF61 875 aa21.97■■□□□ 1.11
NOP56-220ENST00000616692 ARID3CA6NKF2 412 aa21.96■■□□□ 1.11
NOP56-220ENST00000616692 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
NOP56-220ENST00000616692 ZFYVE16Q7Z3T8 1539 aa21.94■■□□□ 1.1
NOP56-220ENST00000616692 PLCH2O75038 1416 aa21.92■■□□□ 1.1
NOP56-220ENST00000616692 LMTK3Q96Q04 1460 aa21.91■■□□□ 1.1
NOP56-220ENST00000616692 TTC37Q6PGP7 1564 aa21.91■■□□□ 1.1
NOP56-220ENST00000616692 MSH5O43196 834 aa21.9■■□□□ 1.1
NOP56-220ENST00000616692 FMN1Q68DA7 1419 aa21.89■■□□□ 1.1
NOP56-220ENST00000616692 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.09
NOP56-220ENST00000616692 RBM19Q9Y4C8 960 aaKnown RBP21.89■■□□□ 1.09
NOP56-220ENST00000616692 ARXQ96QS3 562 aa21.88■■□□□ 1.09
NOP56-220ENST00000616692 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
NOP56-220ENST00000616692 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
NOP56-220ENST00000616692 CDK11AQ9UQ88 783 aaPredicted RBP21.83■■□□□ 1.09
NOP56-220ENST00000616692 FGD1P98174 961 aa21.82■■□□□ 1.08
NOP56-220ENST00000616692 ATP10AO60312 1499 aa21.82■■□□□ 1.08
NOP56-220ENST00000616692 MYO5CQ9NQX4 1742 aa21.81■■□□□ 1.08
NOP56-220ENST00000616692 ARHGEF12Q9NZN5 1544 aa21.81■■□□□ 1.08
NOP56-220ENST00000616692 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
NOP56-220ENST00000616692 SCAPERQ9BY12 1400 aa21.81■■□□□ 1.08
NOP56-220ENST00000616692 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
NOP56-220ENST00000616692 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
NOP56-220ENST00000616692 YEATS2Q9ULM3 1422 aa21.79■■□□□ 1.08
NOP56-220ENST00000616692 REREQ9P2R6 1566 aa21.79■■□□□ 1.08
NOP56-220ENST00000616692 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
NOP56-220ENST00000616692 FER1L4A9Z1Z3 1794 aa21.77■■□□□ 1.08
NOP56-220ENST00000616692 KIF14Q15058 1648 aa21.77■■□□□ 1.07
NOP56-220ENST00000616692 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
NOP56-220ENST00000616692 KDM5CP41229 1560 aa21.75■■□□□ 1.07
NOP56-220ENST00000616692 ZNF518AQ6AHZ1 1483 aa21.75■■□□□ 1.07
NOP56-220ENST00000616692 CLIP1P30622 1438 aa21.75■■□□□ 1.07
NOP56-220ENST00000616692 SIGLEC1Q9BZZ2 1709 aa21.74■■□□□ 1.07
NOP56-220ENST00000616692 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
NOP56-220ENST00000616692 GLIPR1L2Q4G1C9 344 aa21.73■■□□□ 1.07
NOP56-220ENST00000616692 ZMYND15Q9H091 742 aa21.73■■□□□ 1.07
NOP56-220ENST00000616692 PREX1Q8TCU6 1659 aa21.71■■□□□ 1.07
NOP56-220ENST00000616692 IL27Q8NEV9 243 aa21.71■■□□□ 1.07
NOP56-220ENST00000616692 A0A0U1RQG5 324 aaPredicted RBP21.68■■□□□ 1.06
NOP56-220ENST00000616692 BCL11BQ9C0K0 894 aaPredicted RBP21.68■■□□□ 1.06
NOP56-220ENST00000616692 MLH3Q9UHC1 1453 aa21.68■■□□□ 1.06
NOP56-220ENST00000616692 AGLP35573 1532 aa21.68■■□□□ 1.06
NOP56-220ENST00000616692 CCDC18Q5T9S5 1454 aa21.68■■□□□ 1.06
NOP56-220ENST00000616692 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
NOP56-220ENST00000616692 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
NOP56-220ENST00000616692 AAMPQ13685 434 aa21.64■■□□□ 1.06
NOP56-220ENST00000616692 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.06
NOP56-220ENST00000616692 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
NOP56-220ENST00000616692 RTN4Q9NQC3 1192 aaKnown RBP21.63■■□□□ 1.05
NOP56-220ENST00000616692 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
NOP56-220ENST00000616692 DIP2CQ9Y2E4 1556 aa21.63■■□□□ 1.05
NOP56-220ENST00000616692 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
NOP56-220ENST00000616692 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
NOP56-220ENST00000616692 CERKQ8TCT0 537 aa21.6■■□□□ 1.05
NOP56-220ENST00000616692 ABCC1P33527 1531 aa21.59■■□□□ 1.05
NOP56-220ENST00000616692 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.05
NOP56-220ENST00000616692 SETD1BQ9UPS6 1966 aaKnown RBP21.58■■□□□ 1.04
NOP56-220ENST00000616692 CNTLNQ9NXG0 1405 aa21.57■■□□□ 1.04
NOP56-220ENST00000616692 ITSN2Q9NZM3 1697 aa21.57■■□□□ 1.04
NOP56-220ENST00000616692 HSPA2P54652 639 aa21.57■■□□□ 1.04
NOP56-220ENST00000616692 LRRIQ1Q96JM4 1722 aa21.57■■□□□ 1.04
NOP56-220ENST00000616692 UHRF1BP1Q6BDS2 1440 aa21.57■■□□□ 1.04
NOP56-220ENST00000616692 MIER1Q8N108 512 aa21.56■■□□□ 1.04
NOP56-220ENST00000616692 EHMT2Q96KQ7 1210 aa21.56■■□□□ 1.04
NOP56-220ENST00000616692 PTPRTO14522 1441 aa21.56■■□□□ 1.04
NOP56-220ENST00000616692 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
NOP56-220ENST00000616692 RBM10P98175 930 aaKnown RBP21.54■■□□□ 1.04
NOP56-220ENST00000616692 MLECQ14165 292 aa21.54■■□□□ 1.04
NOP56-220ENST00000616692 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
NOP56-220ENST00000616692 TAF7LQ5H9L4 462 aa21.52■■□□□ 1.04
NOP56-220ENST00000616692 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
NOP56-220ENST00000616692 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
NOP56-220ENST00000616692 AFAP1Q8N556 730 aa21.51■■□□□ 1.03
NOP56-220ENST00000616692 IQSEC2Q5JU85 1478 aa21.51■■□□□ 1.03
NOP56-220ENST00000616692 MROH2AA6NES4 1674 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms