RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 CAMSAP2Q08AD1 1489 aa35.45■■■■□ 3.27
CCND3-223ENST00000616010 ZNF644Q9H582 1327 aaPredicted RBP35.43■■■■□ 3.26
CCND3-223ENST00000616010 ARHGAP5Q13017 1502 aa35.42■■■■□ 3.26
CCND3-223ENST00000616010 ZNF777Q9ULD5 760 aaPredicted RBP35.41■■■■□ 3.26
CCND3-223ENST00000616010 PLCH2O75038 1416 aa35.38■■■■□ 3.25
CCND3-223ENST00000616010 SAMD9LQ8IVG5 1584 aa35.35■■■■□ 3.25
CCND3-223ENST00000616010 DNMT1P26358 1616 aaKnown RBP35.33■■■■□ 3.25
CCND3-223ENST00000616010 ARAP3Q8WWN8 1544 aa35.32■■■■□ 3.25
CCND3-223ENST00000616010 DNAJC5Q9H3Z4 198 aa35.32■■■■□ 3.24
CCND3-223ENST00000616010 PTPRKQ15262 1439 aa35.3■■■■□ 3.24
CCND3-223ENST00000616010 DAPK1P53355 1430 aa35.27■■■■□ 3.24
CCND3-223ENST00000616010 DIP2BQ9P265 1576 aa35.25■■■■□ 3.23
CCND3-223ENST00000616010 ABCC5O15440 1437 aa35.23■■■■□ 3.23
CCND3-223ENST00000616010 SYCP2Q9BX26 1530 aa35.22■■■■□ 3.23
CCND3-223ENST00000616010 CROCC2H7BZ55 1655 aa35.22■■■■□ 3.23
CCND3-223ENST00000616010 EFCAB2Q5VUJ9 269 aa35.22■■■■□ 3.23
CCND3-223ENST00000616010 CD109Q6YHK3 1445 aa35.22■■■■□ 3.23
CCND3-223ENST00000616010 GLI2P10070 1586 aa35.22■■■■□ 3.23
CCND3-223ENST00000616010 FANCAO15360 1455 aa35.21■■■■□ 3.23
CCND3-223ENST00000616010 MAP3K4Q9Y6R4 1608 aa35.19■■■■□ 3.22
CCND3-223ENST00000616010 PLEKHH2Q8IVE3 1493 aa35.19■■■■□ 3.22
CCND3-223ENST00000616010 ARHGEF5Q12774 1597 aa35.18■■■■□ 3.22
CCND3-223ENST00000616010 ABCC1P33527 1531 aa35.17■■■■□ 3.22
CCND3-223ENST00000616010 MBD5Q9P267 1494 aa35.17■■■■□ 3.22
CCND3-223ENST00000616010 HNRNPMP52272 730 aaKnown RBP eCLIP35.15■■■■□ 3.22
CCND3-223ENST00000616010 CHIC2Q9UKJ5 165 aa35.15■■■■□ 3.22
CCND3-223ENST00000616010 KIAA1107Q9UPP5 1409 aa35.14■■■■□ 3.22
CCND3-223ENST00000616010 CCDC141Q6ZP82 1450 aa35.12■■■■□ 3.21
CCND3-223ENST00000616010 FAM69CQ0P6D2 419 aa35.11■■■■□ 3.21
CCND3-223ENST00000616010 CFAP74Q9C0B2 1584 aa35.11■■■■□ 3.21
CCND3-223ENST00000616010 ARHGEF12Q9NZN5 1544 aa35.11■■■■□ 3.21
CCND3-223ENST00000616010 ADGBQ8N7X0 1667 aa35.09■■■■□ 3.21
CCND3-223ENST00000616010 AKNAQ7Z591 1439 aa35.09■■■■□ 3.21
CCND3-223ENST00000616010 SHANK2Q9UPX8 1470 aa35.09■■■■□ 3.21
CCND3-223ENST00000616010 HFM1A2PYH4 1435 aa35.09■■■■□ 3.21
CCND3-223ENST00000616010 SETD5Q9C0A6 1442 aa35.08■■■■□ 3.21
CCND3-223ENST00000616010 KIF13AQ9H1H9 1805 aa35.07■■■■□ 3.2
CCND3-223ENST00000616010 ADGRL1O94910 1474 aa35.05■■■■□ 3.2
CCND3-223ENST00000616010 GCC2Q8IWJ2 1684 aa35.04■■■■□ 3.2
CCND3-223ENST00000616010 C9orf84Q5VXU9 1444 aa35.04■■■■□ 3.2
CCND3-223ENST00000616010 ROCK1Q13464 1354 aa35.04■■■■□ 3.2
CCND3-223ENST00000616010 RAB3GAP2Q9H2M9 1393 aa35.04■■■■□ 3.2
CCND3-223ENST00000616010 NAIPQ13075 1403 aa35.03■■■■□ 3.2
CCND3-223ENST00000616010 RSPH4AQ5TD94 716 aa35.03■■■■□ 3.2
CCND3-223ENST00000616010 RRP7BPQ9NSQ0 103 aa35.02■■■■□ 3.2
CCND3-223ENST00000616010 ADGRL2O95490 1459 aa35.01■■■■□ 3.19
CCND3-223ENST00000616010 TRAPPC8Q9Y2L5 1435 aa34.99■■■■□ 3.19
CCND3-223ENST00000616010 TSPY4P0CV99 314 aa34.99■■■■□ 3.19
CCND3-223ENST00000616010 TSPY10P0CW01 314 aa34.99■■■■□ 3.19
CCND3-223ENST00000616010 TSPOAP1O95153 1857 aa34.98■■■■□ 3.19
CCND3-223ENST00000616010 NEO1Q92859 1461 aa34.97■■■■□ 3.19
CCND3-223ENST00000616010 SCAPERQ9BY12 1400 aa34.97■■■■□ 3.19
CCND3-223ENST00000616010 MAST1Q9Y2H9 1570 aa34.96■■■■□ 3.19
CCND3-223ENST00000616010 PPRC1Q5VV67 1664 aaKnown RBP34.95■■■■□ 3.19
CCND3-223ENST00000616010 NCOA1Q15788 1441 aa34.95■■■■□ 3.19
CCND3-223ENST00000616010 ANKRD30AQ9BXX3 1397 aa34.94■■■■□ 3.18
CCND3-223ENST00000616010 KDM6BO15054 1643 aa34.87■■■■□ 3.17
CCND3-223ENST00000616010 AFAP1Q8N556 730 aa34.87■■■■□ 3.17
CCND3-223ENST00000616010 TEX14Q8IWB6 1497 aa34.87■■■■□ 3.17
CCND3-223ENST00000616010 CCER1Q8TC90 406 aaPredicted RBP34.85■■■■□ 3.17
CCND3-223ENST00000616010 ZNF518AQ6AHZ1 1483 aa34.84■■■■□ 3.17
CCND3-223ENST00000616010 PLXNC1O60486 1568 aa34.84■■■■□ 3.17
CCND3-223ENST00000616010 POGZQ7Z3K3 1410 aa34.84■■■■□ 3.17
CCND3-223ENST00000616010 ZFYVE16Q7Z3T8 1539 aa34.83■■■■□ 3.17
CCND3-223ENST00000616010 KIF15Q9NS87 1388 aa34.82■■■■□ 3.16
CCND3-223ENST00000616010 HRCP23327 699 aa34.82■■■■□ 3.16
CCND3-223ENST00000616010 INO80Q9ULG1 1556 aaPredicted RBP34.81■■■■□ 3.16
CCND3-223ENST00000616010 SPAG9O60271 1321 aaKnown RBP34.81■■■■□ 3.16
CCND3-223ENST00000616010 ATP7AQ04656 1500 aa34.78■■■■□ 3.16
CCND3-223ENST00000616010 DENND4BO75064 1496 aaPredicted RBP34.78■■■■□ 3.16
CCND3-223ENST00000616010 KDM5CP41229 1560 aa34.78■■■■□ 3.16
CCND3-223ENST00000616010 RTEL1-TNFRSF6BF6WH68 1400 aa34.77■■■■□ 3.16
CCND3-223ENST00000616010 DHX57Q6P158 1386 aaKnown RBP34.76■■■■□ 3.15
CCND3-223ENST00000616010 ANKRD50Q9ULJ7 1429 aa34.75■■■■□ 3.15
CCND3-223ENST00000616010 RICTORQ6R327 1708 aa34.74■■■■□ 3.15
CCND3-223ENST00000616010 HECW2Q9P2P5 1572 aa34.7■■■■□ 3.15
CCND3-223ENST00000616010 KIDINS220Q9ULH0 1771 aa34.7■■■■□ 3.15
CCND3-223ENST00000616010 RAPGEF3O95398 923 aa34.69■■■■□ 3.14
CCND3-223ENST00000616010 FRMPD1Q5SYB0 1578 aa34.68■■■■□ 3.14
CCND3-223ENST00000616010 DUOX2Q9NRD8 1548 aa34.68■■■■□ 3.14
CCND3-223ENST00000616010 TRHP20396 242 aaPredicted RBP34.67■■■■□ 3.14
CCND3-223ENST00000616010 MYT1LQ9UL68 1186 aa34.67■■■■□ 3.14
CCND3-223ENST00000616010 MLH3Q9UHC1 1453 aa34.64■■■■□ 3.14
CCND3-223ENST00000616010 TRIM52Q96A61 297 aa34.61■■■■□ 3.13
CCND3-223ENST00000616010 ERBINQ96RT1 1412 aa34.6■■■■□ 3.13
CCND3-223ENST00000616010 ACIN1Q9UKV3 1341 aaKnown RBP34.56■■■■□ 3.12
CCND3-223ENST00000616010 ZMYM4Q5VZL5 1548 aa34.56■■■■□ 3.12
CCND3-223ENST00000616010 ABCA6Q8N139 1617 aa34.56■■■■□ 3.12
CCND3-223ENST00000616010 COL17A1Q9UMD9 1497 aaPredicted RBP34.52■■■■□ 3.12
CCND3-223ENST00000616010 UNC13BO14795 1591 aa34.5■■■■□ 3.11
CCND3-223ENST00000616010 DIP2CQ9Y2E4 1556 aa34.5■■■■□ 3.11
CCND3-223ENST00000616010 CLSPNQ9HAW4 1339 aa34.48■■■■□ 3.11
CCND3-223ENST00000616010 DHX29Q7Z478 1369 aaKnown RBP34.47■■■■□ 3.11
CCND3-223ENST00000616010 A2MP01023 1474 aa34.47■■■■□ 3.11
CCND3-223ENST00000616010 EIF2AK4Q9P2K8 1649 aaKnown RBP34.46■■■■□ 3.11
CCND3-223ENST00000616010 KDM5DQ9BY66 1539 aa34.46■■■■□ 3.11
CCND3-223ENST00000616010 PZPP20742 1482 aa34.46■■■■□ 3.11
CCND3-223ENST00000616010 YEATS2Q9ULM3 1422 aa34.45■■■■□ 3.11
CCND3-223ENST00000616010 NUP155O75694 1391 aa34.44■■■■□ 3.1
CCND3-223ENST00000616010 MAGI2Q86UL8 1455 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms