RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	EFCAB5	A4FU69	1503 aa		12.57	□□□□□ -0.4
NCAM1-222	ENST00000615285	PPM1G	O15355	546 aa	Predicted RBP	12.57	□□□□□ -0.4
NCAM1-222	ENST00000615285	BICRA	Q9NZM4	1560 aa		12.57	□□□□□ -0.4
NCAM1-222	ENST00000615285	MS4A1	P11836	297 aa		12.56	□□□□□ -0.4
NCAM1-222	ENST00000615285	SALL2	Q9Y467	1007 aa	Predicted RBP	12.55	□□□□□ -0.4
NCAM1-222	ENST00000615285	TOP2B	Q02880	1626 aa		12.55	□□□□□ -0.4
NCAM1-222	ENST00000615285	PLEKHG5	O94827	1062 aa		12.55	□□□□□ -0.4
NCAM1-222	ENST00000615285	MYOM3	Q5VTT5	1437 aa		12.55	□□□□□ -0.4
NCAM1-222	ENST00000615285	KIF21B	O75037	1637 aa		12.55	□□□□□ -0.4
NCAM1-222	ENST00000615285	PRDM2	Q13029	1718 aa		12.55	□□□□□ -0.4
NCAM1-222	ENST00000615285	FKBP8	Q14318	412 aa		12.54	□□□□□ -0.4
NCAM1-222	ENST00000615285	CHMP4A	Q9BY43	222 aa		12.54	□□□□□ -0.4
NCAM1-222	ENST00000615285	ROCK2	O75116	1388 aa	Known RBP	12.54	□□□□□ -0.4
NCAM1-222	ENST00000615285	FAM69C	Q0P6D2	419 aa		12.53	□□□□□ -0.4
NCAM1-222	ENST00000615285	HSP90AA1	P07900	732 aa	Known RBP	12.53	□□□□□ -0.4
NCAM1-222	ENST00000615285	NES	P48681	1621 aa		12.53	□□□□□ -0.4
NCAM1-222	ENST00000615285	SIN3A	Q96ST3	1273 aa		12.52	□□□□□ -0.41
NCAM1-222	ENST00000615285	RAB3GAP2	Q9H2M9	1393 aa		12.52	□□□□□ -0.41
NCAM1-222	ENST00000615285	PRG4	Q92954	1404 aa	Predicted RBP	12.52	□□□□□ -0.41
NCAM1-222	ENST00000615285	CCDC136	Q96JN2	1154 aa		12.51	□□□□□ -0.41
NCAM1-222	ENST00000615285	PLEKHH2	Q8IVE3	1493 aa		12.51	□□□□□ -0.41
NCAM1-222	ENST00000615285	MORC1	Q86VD1	984 aa		12.51	□□□□□ -0.41
NCAM1-222	ENST00000615285	STAC3	Q96MF2	364 aa		12.5	□□□□□ -0.41
NCAM1-222	ENST00000615285	CASKIN1	Q8WXD9	1431 aa		12.5	□□□□□ -0.41
NCAM1-222	ENST00000615285	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
NCAM1-222	ENST00000615285	TERF2IP	Q9NYB0	399 aa		12.5	□□□□□ -0.41
NCAM1-222	ENST00000615285	POLA1	P09884	1462 aa	Predicted RBP	12.5	□□□□□ -0.41
NCAM1-222	ENST00000615285	CCDC144A	A2RUR9	1427 aa		12.5	□□□□□ -0.41
NCAM1-222	ENST00000615285	SNAPC4	Q5SXM2	1469 aa		12.49	□□□□□ -0.41
NCAM1-222	ENST00000615285	VGF	O15240	615 aa	Predicted RBP	12.49	□□□□□ -0.41
NCAM1-222	ENST00000615285	FYCO1	Q9BQS8	1478 aa		12.49	□□□□□ -0.41
NCAM1-222	ENST00000615285	CALD1	Q05682	793 aa	Known RBP	12.49	□□□□□ -0.41
NCAM1-222	ENST00000615285	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.48	□□□□□ -0.41
NCAM1-222	ENST00000615285	STK26	Q9P289	416 aa		12.48	□□□□□ -0.41
NCAM1-222	ENST00000615285	ARX	Q96QS3	562 aa		12.47	□□□□□ -0.41
NCAM1-222	ENST00000615285	RUSC2	Q8N2Y8	1516 aa		12.47	□□□□□ -0.41
NCAM1-222	ENST00000615285	NBR1	Q14596	966 aa		12.47	□□□□□ -0.41
NCAM1-222	ENST00000615285	KTN1	Q86UP2	1357 aa	Known RBP	12.47	□□□□□ -0.41
NCAM1-222	ENST00000615285	PEG3	Q9GZU2	1588 aa		12.47	□□□□□ -0.41
NCAM1-222	ENST00000615285	NPHP1	O15259	732 aa		12.46	□□□□□ -0.41
NCAM1-222	ENST00000615285	U2SURP	O15042	1029 aa	Known RBP	12.46	□□□□□ -0.42
NCAM1-222	ENST00000615285	FTSJ3	Q8IY81	847 aa	Known RBP	12.46	□□□□□ -0.42
NCAM1-222	ENST00000615285	CUL7	Q14999	1698 aa		12.45	□□□□□ -0.42
NCAM1-222	ENST00000615285	HECW1	Q76N89	1606 aa		12.45	□□□□□ -0.42
NCAM1-222	ENST00000615285	CASC1	Q6TDU7	716 aa		12.45	□□□□□ -0.42
NCAM1-222	ENST00000615285	RTF1	Q92541	710 aa	Known RBP	12.45	□□□□□ -0.42
NCAM1-222	ENST00000615285	SYNJ1	O43426	1573 aa		12.45	□□□□□ -0.42
NCAM1-222	ENST00000615285	ARHGAP5	Q13017	1502 aa		12.45	□□□□□ -0.42
NCAM1-222	ENST00000615285	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.44	□□□□□ -0.42
NCAM1-222	ENST00000615285	ABCA10	Q8WWZ4	1543 aa		12.44	□□□□□ -0.42
NCAM1-222	ENST00000615285	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.44	□□□□□ -0.42
NCAM1-222	ENST00000615285	IRX6	P78412	446 aa	Predicted RBP	12.43	□□□□□ -0.42
NCAM1-222	ENST00000615285	CC2D1B	Q5T0F9	858 aa	Known RBP	12.43	□□□□□ -0.42
NCAM1-222	ENST00000615285	RALBP1	Q15311	655 aa		12.43	□□□□□ -0.42
NCAM1-222	ENST00000615285	PAK3	O75914	559 aa	Predicted RBP	12.42	□□□□□ -0.42
NCAM1-222	ENST00000615285	KIAA0586	Q9BVV6	1533 aa		12.42	□□□□□ -0.42
NCAM1-222	ENST00000615285	CSB-PGBD3	P0DP91	1061 aa		12.42	□□□□□ -0.42
NCAM1-222	ENST00000615285	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
NCAM1-222	ENST00000615285	ANP32B	Q92688	251 aa	Known RBP	12.42	□□□□□ -0.42
NCAM1-222	ENST00000615285	EHBP1L1	Q8N3D4	1523 aa		12.41	□□□□□ -0.42
NCAM1-222	ENST00000615285	LAS1L	Q9Y4W2	734 aa	Known RBP	12.41	□□□□□ -0.42
NCAM1-222	ENST00000615285	HSPA5	P11021	654 aa	Known RBP	12.4	□□□□□ -0.42
NCAM1-222	ENST00000615285	POGZ	Q7Z3K3	1410 aa		12.4	□□□□□ -0.42
NCAM1-222	ENST00000615285	NGDN	Q8NEJ9	315 aa	Known RBP	12.4	□□□□□ -0.42
NCAM1-222	ENST00000615285	FGD6	Q6ZV73	1430 aa		12.4	□□□□□ -0.42
NCAM1-222	ENST00000615285	TNNT2	P45379	298 aa	Predicted RBP	12.39	□□□□□ -0.43
NCAM1-222	ENST00000615285	SENP3-EIF4A1	A0A087X0R7	540 aa		12.39	□□□□□ -0.43
NCAM1-222	ENST00000615285	CCER2	I3L3R5	266 aa		12.38	□□□□□ -0.43
NCAM1-222	ENST00000615285	LRRC9	Q6ZRR7	1453 aa		12.38	□□□□□ -0.43
NCAM1-222	ENST00000615285	KIF15	Q9NS87	1388 aa		12.38	□□□□□ -0.43
NCAM1-222	ENST00000615285	MIER1	Q8N108	512 aa		12.37	□□□□□ -0.43
NCAM1-222	ENST00000615285	UNC13A	Q9UPW8	1703 aa		12.37	□□□□□ -0.43
NCAM1-222	ENST00000615285	EVC2	Q86UK5	1308 aa		12.36	□□□□□ -0.43
NCAM1-222	ENST00000615285	CFAP44	Q96MT7	982 aa		12.36	□□□□□ -0.43
NCAM1-222	ENST00000615285	NCOA2	Q15596	1464 aa		12.36	□□□□□ -0.43
NCAM1-222	ENST00000615285	LMOD3	Q0VAK6	560 aa		12.36	□□□□□ -0.43
NCAM1-222	ENST00000615285	FOXD1	Q16676	465 aa		12.36	□□□□□ -0.43
NCAM1-222	ENST00000615285	HDAC5	Q9UQL6	1122 aa		12.36	□□□□□ -0.43
NCAM1-222	ENST00000615285	IQGAP2	Q13576	1575 aa		12.35	□□□□□ -0.43
NCAM1-222	ENST00000615285	PHLDB1	Q86UU1	1377 aa		12.35	□□□□□ -0.43
NCAM1-222	ENST00000615285	NEUROD2	Q15784	382 aa		12.35	□□□□□ -0.43
NCAM1-222	ENST00000615285	PRX	Q9BXM0	1461 aa		12.35	□□□□□ -0.43
NCAM1-222	ENST00000615285	MIA2	Q96PC5	1412 aa		12.34	□□□□□ -0.43
NCAM1-222	ENST00000615285	TRO	Q12816	1431 aa	Predicted RBP	12.34	□□□□□ -0.43
NCAM1-222	ENST00000615285	IPO8	O15397	1037 aa	Known RBP	12.33	□□□□□ -0.44
NCAM1-222	ENST00000615285	BECN1	Q14457	450 aa		12.32	□□□□□ -0.44
NCAM1-222	ENST00000615285	SOX12	O15370	315 aa		12.32	□□□□□ -0.44
NCAM1-222	ENST00000615285	GOLGA2	Q08379	1002 aa		12.32	□□□□□ -0.44
NCAM1-222	ENST00000615285	OS9	Q13438	667 aa	Predicted RBP	12.32	□□□□□ -0.44
NCAM1-222	ENST00000615285	L3MBTL2	Q969R5	705 aa		12.32	□□□□□ -0.44
NCAM1-222	ENST00000615285	ANKRD50	Q9ULJ7	1429 aa		12.31	□□□□□ -0.44
NCAM1-222	ENST00000615285	TMX4	Q9H1E5	349 aa	Predicted RBP	12.31	□□□□□ -0.44
NCAM1-222	ENST00000615285	CCDC9	Q9Y3X0	531 aa	Known RBP	12.31	□□□□□ -0.44
NCAM1-222	ENST00000615285	DDRGK1	Q96HY6	314 aa		12.31	□□□□□ -0.44
NCAM1-222	ENST00000615285	RRBP1	Q9P2E9	1410 aa	Known RBP	12.31	□□□□□ -0.44
NCAM1-222	ENST00000615285	DHX57	Q6P158	1386 aa	Known RBP	12.3	□□□□□ -0.44
NCAM1-222	ENST00000615285	AMPH	P49418	695 aa		12.3	□□□□□ -0.44
NCAM1-222	ENST00000615285	GRIN2A	Q12879	1464 aa		12.3	□□□□□ -0.44
NCAM1-222	ENST00000615285	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.28	□□□□□ -0.44
NCAM1-222	ENST00000615285	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.28	□□□□□ -0.44

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