RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 MPHOSPH9Q99550 1183 aa28.17■■■□□ 2.1
SMARCD2-212ENST00000613943 ZNF777Q9ULD5 760 aaPredicted RBP28.17■■■□□ 2.1
SMARCD2-212ENST00000613943 AKNAQ7Z591 1439 aa28.15■■■□□ 2.1
SMARCD2-212ENST00000613943 TROQ12816 1431 aaPredicted RBP28.14■■■□□ 2.1
SMARCD2-212ENST00000613943 CARMIL2Q6F5E8 1435 aa28.14■■■□□ 2.1
SMARCD2-212ENST00000613943 CFDP1Q9UEE9 299 aaPredicted RBP28.13■■■□□ 2.09
SMARCD2-212ENST00000613943 KDM5BQ9UGL1 1544 aa28.13■■■□□ 2.09
SMARCD2-212ENST00000613943 KIF14Q15058 1648 aa28.11■■■□□ 2.09
SMARCD2-212ENST00000613943 DNMT1P26358 1616 aaKnown RBP28.08■■■□□ 2.09
SMARCD2-212ENST00000613943 GPATCH8Q9UKJ3 1502 aaKnown RBP28.05■■■□□ 2.08
SMARCD2-212ENST00000613943 CAMSAP2Q08AD1 1489 aa28.05■■■□□ 2.08
SMARCD2-212ENST00000613943 ROCK1Q13464 1354 aa28.04■■■□□ 2.08
SMARCD2-212ENST00000613943 L3MBTL2Q969R5 705 aa28■■■□□ 2.07
SMARCD2-212ENST00000613943 SLC4A1APQ9BWU0 796 aaKnown RBP27.99■■■□□ 2.07
SMARCD2-212ENST00000613943 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
SMARCD2-212ENST00000613943 ATP10BO94823 1461 aa27.97■■■□□ 2.07
SMARCD2-212ENST00000613943 ABCA8O94911 1581 aa27.95■■■□□ 2.07
SMARCD2-212ENST00000613943 ANKRD30BQ9BXX2 1392 aa27.92■■■□□ 2.06
SMARCD2-212ENST00000613943 NCOA1Q15788 1441 aa27.92■■■□□ 2.06
SMARCD2-212ENST00000613943 HSPA5P11021 654 aaKnown RBP27.92■■■□□ 2.06
SMARCD2-212ENST00000613943 ITSN2Q9NZM3 1697 aa27.91■■■□□ 2.06
SMARCD2-212ENST00000613943 ADCY10Q96PN6 1610 aa27.91■■■□□ 2.06
SMARCD2-212ENST00000613943 ANP32CO43423 234 aa27.9■■■□□ 2.06
SMARCD2-212ENST00000613943 PTPRGP23470 1445 aa27.88■■■□□ 2.05
SMARCD2-212ENST00000613943 ABCC10Q5T3U5 1492 aa27.84■■■□□ 2.05
SMARCD2-212ENST00000613943 NBPF8Q3BBV2 869 aa27.84■■■□□ 2.05
SMARCD2-212ENST00000613943 PZPP20742 1482 aa27.84■■■□□ 2.05
SMARCD2-212ENST00000613943 WASHC2AQ641Q2 1341 aa27.83■■■□□ 2.05
SMARCD2-212ENST00000613943 RPRD2Q5VT52 1461 aaKnown RBP27.83■■■□□ 2.05
SMARCD2-212ENST00000613943 CDC42BPAQ5VT25 1732 aa27.81■■■□□ 2.04
SMARCD2-212ENST00000613943 HNRNPMP52272 730 aaKnown RBP eCLIP27.81■■■□□ 2.04
SMARCD2-212ENST00000613943 CHD1O14646 1710 aa27.8■■■□□ 2.04
SMARCD2-212ENST00000613943 EIF4G2P78344 907 aaKnown RBP eCLIP27.8■■■□□ 2.04
SMARCD2-212ENST00000613943 ANKRD30AQ9BXX3 1397 aa27.79■■■□□ 2.04
SMARCD2-212ENST00000613943 TEX14Q8IWB6 1497 aa27.78■■■□□ 2.04
SMARCD2-212ENST00000613943 CROCC2H7BZ55 1655 aa27.77■■■□□ 2.04
SMARCD2-212ENST00000613943 ADGBQ8N7X0 1667 aa27.77■■■□□ 2.04
SMARCD2-212ENST00000613943 ADGRL2O95490 1459 aa27.77■■■□□ 2.04
SMARCD2-212ENST00000613943 PKD2Q13563 968 aa27.76■■■□□ 2.04
SMARCD2-212ENST00000613943 ANKRD50Q9ULJ7 1429 aa27.76■■■□□ 2.03
SMARCD2-212ENST00000613943 C11orf95C9JLR9 678 aaPredicted RBP27.75■■■□□ 2.03
SMARCD2-212ENST00000613943 SUPT16HQ9Y5B9 1047 aaKnown RBP27.75■■■□□ 2.03
SMARCD2-212ENST00000613943 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
SMARCD2-212ENST00000613943 CCER2I3L3R5 266 aa27.73■■■□□ 2.03
SMARCD2-212ENST00000613943 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
SMARCD2-212ENST00000613943 TSPY4P0CV99 314 aa27.7■■■□□ 2.02
SMARCD2-212ENST00000613943 TSPY10P0CW01 314 aa27.7■■■□□ 2.02
SMARCD2-212ENST00000613943 PELP1Q8IZL8 1130 aaKnown RBP27.7■■■□□ 2.02
SMARCD2-212ENST00000613943 ZNF326Q5BKZ1 582 aaKnown RBP27.69■■■□□ 2.02
SMARCD2-212ENST00000613943 KIAA1107Q9UPP5 1409 aa27.68■■■□□ 2.02
SMARCD2-212ENST00000613943 NUP155O75694 1391 aa27.68■■■□□ 2.02
SMARCD2-212ENST00000613943 KIF15Q9NS87 1388 aa27.63■■■□□ 2.01
SMARCD2-212ENST00000613943 MBD5Q9P267 1494 aa27.62■■■□□ 2.01
SMARCD2-212ENST00000613943 SHANK2Q9UPX8 1470 aa27.61■■■□□ 2.01
SMARCD2-212ENST00000613943 SAMD9LQ8IVG5 1584 aa27.6■■■□□ 2.01
SMARCD2-212ENST00000613943 CCDC7Q96M83 1385 aa27.58■■■□□ 2.01
SMARCD2-212ENST00000613943 CDC42BPBQ9Y5S2 1711 aa27.57■■■□□ 2
SMARCD2-212ENST00000613943 SHROOM2Q13796 1616 aa27.57■■■□□ 2
SMARCD2-212ENST00000613943 TTC37Q6PGP7 1564 aa27.56■■■□□ 2
SMARCD2-212ENST00000613943 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
SMARCD2-212ENST00000613943 CNTLNQ9NXG0 1405 aa27.54■■■□□ 2
SMARCD2-212ENST00000613943 PREX2Q70Z35 1606 aa27.53■■■□□ 2
SMARCD2-212ENST00000613943 CCDC141Q6ZP82 1450 aa27.53■■■□□ 2
SMARCD2-212ENST00000613943 KIF7Q2M1P5 1343 aa27.53■■■□□ 2
SMARCD2-212ENST00000613943 CCDC184Q52MB2 194 aa27.53■■■□□ 2
SMARCD2-212ENST00000613943 SYCP2Q9BX26 1530 aa27.52■■■□□ 2
SMARCD2-212ENST00000613943 BCANQ96GW7 911 aa27.52■■■□□ 2
SMARCD2-212ENST00000613943 ARHGAP5Q13017 1502 aa27.51■■■□□ 2
SMARCD2-212ENST00000613943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.51■■■□□ 2
SMARCD2-212ENST00000613943 ARHGEF5Q12774 1597 aa27.51■■□□□ 1.99
SMARCD2-212ENST00000613943 KDM2AQ9Y2K7 1162 aa27.49■■□□□ 1.99
SMARCD2-212ENST00000613943 ABCC2Q92887 1545 aa27.49■■□□□ 1.99
SMARCD2-212ENST00000613943 POLR3GLQ9BT43 218 aa27.49■■□□□ 1.99
SMARCD2-212ENST00000613943 CNGB1Q14028 1251 aaPredicted RBP27.47■■□□□ 1.99
SMARCD2-212ENST00000613943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.46■■□□□ 1.991e-7■■■■□ 21.5
SMARCD2-212ENST00000613943 HNRNPUQ00839 825 aaKnown RBP eCLIP27.45■■□□□ 1.99
SMARCD2-212ENST00000613943 FKBP8Q14318 412 aa27.45■■□□□ 1.99
SMARCD2-212ENST00000613943 USP47Q96K76 1375 aa27.44■■□□□ 1.98
SMARCD2-212ENST00000613943 PRKRIP1Q9H875 184 aaPredicted RBP27.42■■□□□ 1.98
SMARCD2-212ENST00000613943 KDM5DQ9BY66 1539 aa27.41■■□□□ 1.98
SMARCD2-212ENST00000613943 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
SMARCD2-212ENST00000613943 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
SMARCD2-212ENST00000613943 FAM135AQ9P2D6 1515 aa27.38■■□□□ 1.97
SMARCD2-212ENST00000613943 ARHGEF12Q9NZN5 1544 aa27.37■■□□□ 1.97
SMARCD2-212ENST00000613943 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
SMARCD2-212ENST00000613943 CARD11Q9BXL7 1154 aa27.35■■□□□ 1.97
SMARCD2-212ENST00000613943 BCORL1Q5H9F3 1711 aa27.34■■□□□ 1.97
SMARCD2-212ENST00000613943 FAM9BQ8IZU0 186 aa27.34■■□□□ 1.97
SMARCD2-212ENST00000613943 ZCCHC11Q5TAX3 1644 aaKnown RBP27.33■■□□□ 1.97
SMARCD2-212ENST00000613943 RGL3Q3MIN7 710 aa27.33■■□□□ 1.97
SMARCD2-212ENST00000613943 MYO5CQ9NQX4 1742 aa27.32■■□□□ 1.96
SMARCD2-212ENST00000613943 PLEKHH2Q8IVE3 1493 aa27.32■■□□□ 1.96
SMARCD2-212ENST00000613943 MRS2Q9HD23 443 aa27.32■■□□□ 1.96
SMARCD2-212ENST00000613943 UHRF1BP1Q6BDS2 1440 aa27.3■■□□□ 1.96
SMARCD2-212ENST00000613943 KDM5CP41229 1560 aa27.3■■□□□ 1.96
SMARCD2-212ENST00000613943 RALGAPBQ86X10 1494 aa27.28■■□□□ 1.96
SMARCD2-212ENST00000613943 PLCH2O75038 1416 aa27.27■■□□□ 1.96
SMARCD2-212ENST00000613943 ST20-MTHFSA0A0A6YYL1 179 aa27.25■■□□□ 1.95
SMARCD2-212ENST00000613943 CCDC144AA2RUR9 1427 aa27.25■■□□□ 1.95
SMARCD2-212ENST00000613943 TRAPPC8Q9Y2L5 1435 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms