RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
CFDP1-211ENST00000612761 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
CFDP1-211ENST00000612761 KIF3CO14782 793 aa11.52□□□□□ -0.57
CFDP1-211ENST00000612761 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
CFDP1-211ENST00000612761 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
CFDP1-211ENST00000612761 PDE4AP27815 886 aa11.47□□□□□ -0.57
CFDP1-211ENST00000612761 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
CFDP1-211ENST00000612761 DOK7Q18PE1 504 aa11.45□□□□□ -0.58
CFDP1-211ENST00000612761 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
CFDP1-211ENST00000612761 NCKAP5LQ9HCH0 1330 aa11.44□□□□□ -0.58
CFDP1-211ENST00000612761 FOXK1P85037 733 aa11.44□□□□□ -0.58
CFDP1-211ENST00000612761 HOXB3P14651 431 aaPredicted RBP11.43□□□□□ -0.58
CFDP1-211ENST00000612761 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
CFDP1-211ENST00000612761 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
CFDP1-211ENST00000612761 DSG2Q14126 1118 aa11.41□□□□□ -0.58
CFDP1-211ENST00000612761 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
CFDP1-211ENST00000612761 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
CFDP1-211ENST00000612761 ST18O60284 1047 aa11.4□□□□□ -0.58
CFDP1-211ENST00000612761 PLPP6Q8IY26 295 aa11.4□□□□□ -0.58
CFDP1-211ENST00000612761 PPP1R15BQ5SWA1 713 aa11.38□□□□□ -0.59
CFDP1-211ENST00000612761 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
CFDP1-211ENST00000612761 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
CFDP1-211ENST00000612761 MFSD10Q14728 455 aa11.36□□□□□ -0.59
CFDP1-211ENST00000612761 ZSWIM6Q9HCJ5 1215 aa11.36□□□□□ -0.59
CFDP1-211ENST00000612761 TSHZ2Q9NRE2 1034 aa11.36□□□□□ -0.59
CFDP1-211ENST00000612761 SLC34A2O95436 690 aa11.34□□□□□ -0.59
CFDP1-211ENST00000612761 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
CFDP1-211ENST00000612761 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
CFDP1-211ENST00000612761 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
CFDP1-211ENST00000612761 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
CFDP1-211ENST00000612761 ARSIQ5FYB1 569 aa11.28□□□□□ -0.6
CFDP1-211ENST00000612761 PCDHGA4Q9Y5G9 962 aa11.28□□□□□ -0.6
CFDP1-211ENST00000612761 TBC1D12O60347 775 aa11.27□□□□□ -0.61
CFDP1-211ENST00000612761 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
CFDP1-211ENST00000612761 EMP3P54852 163 aa11.27□□□□□ -0.61
CFDP1-211ENST00000612761 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
CFDP1-211ENST00000612761 POTEMA6NI47 508 aa11.26□□□□□ -0.61
CFDP1-211ENST00000612761 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
CFDP1-211ENST00000612761 OXER1Q8TDS5 423 aa11.24□□□□□ -0.61
CFDP1-211ENST00000612761 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
CFDP1-211ENST00000612761 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.613e-11■■■■□ 20
CFDP1-211ENST00000612761 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
CFDP1-211ENST00000612761 NUDT7P0C024 238 aa11.21□□□□□ -0.61
CFDP1-211ENST00000612761 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
CFDP1-211ENST00000612761 ERBB3P21860 1342 aa11.19□□□□□ -0.62
CFDP1-211ENST00000612761 E2F4Q16254 413 aa11.19□□□□□ -0.62
CFDP1-211ENST00000612761 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
CFDP1-211ENST00000612761 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
CFDP1-211ENST00000612761 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
CFDP1-211ENST00000612761 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
CFDP1-211ENST00000612761 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
CFDP1-211ENST00000612761 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
CFDP1-211ENST00000612761 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
CFDP1-211ENST00000612761 EVI5O60447 810 aa11.12□□□□□ -0.63
CFDP1-211ENST00000612761 DPYSL4O14531 572 aa11.11□□□□□ -0.63
CFDP1-211ENST00000612761 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
CFDP1-211ENST00000612761 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
CFDP1-211ENST00000612761 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
CFDP1-211ENST00000612761 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
CFDP1-211ENST00000612761 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
CFDP1-211ENST00000612761 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
CFDP1-211ENST00000612761 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
CFDP1-211ENST00000612761 ARIH1Q9Y4X5 557 aaPredicted RBP11.08□□□□□ -0.64
CFDP1-211ENST00000612761 KDM2AQ9Y2K7 1162 aa11.07□□□□□ -0.64
CFDP1-211ENST00000612761 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
CFDP1-211ENST00000612761 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
CFDP1-211ENST00000612761 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
CFDP1-211ENST00000612761 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
CFDP1-211ENST00000612761 PDIA6Q15084 440 aa11.03□□□□□ -0.64
CFDP1-211ENST00000612761 PPP4R3BQ5MIZ7 849 aa11.03□□□□□ -0.64
CFDP1-211ENST00000612761 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
CFDP1-211ENST00000612761 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
CFDP1-211ENST00000612761 FOSBP53539 338 aa11□□□□□ -0.65
CFDP1-211ENST00000612761 JPH4Q96JJ6 628 aa11□□□□□ -0.65
CFDP1-211ENST00000612761 PTGER2P43116 358 aa10.98□□□□□ -0.65
CFDP1-211ENST00000612761 PBX2P40425 430 aa10.97□□□□□ -0.65
CFDP1-211ENST00000612761 PHF14O94880 888 aa10.95□□□□□ -0.66
CFDP1-211ENST00000612761 DDX12PQ92771 950 aa10.95□□□□□ -0.66
CFDP1-211ENST00000612761 ZDHHC16Q969W1 377 aa10.95□□□□□ -0.66
CFDP1-211ENST00000612761 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
CFDP1-211ENST00000612761 KRTAP3-2Q9BYR7 98 aa10.95□□□□□ -0.66
CFDP1-211ENST00000612761 PCDHGA10Q9Y5H3 936 aa10.95□□□□□ -0.66
CFDP1-211ENST00000612761 EPAS1Q99814 870 aa10.94□□□□□ -0.66
CFDP1-211ENST00000612761 TYW1BQ6NUM6 668 aa10.93□□□□□ -0.66
CFDP1-211ENST00000612761 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
CFDP1-211ENST00000612761 KCNH8Q96L42 1107 aa10.93□□□□□ -0.66
CFDP1-211ENST00000612761 ARHGAP33O14559 1287 aa10.92□□□□□ -0.66
CFDP1-211ENST00000612761 BCL2L12Q9HB09 334 aa10.92□□□□□ -0.66
CFDP1-211ENST00000612761 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
CFDP1-211ENST00000612761 AXIN2Q9Y2T1 843 aa10.91□□□□□ -0.66
CFDP1-211ENST00000612761 GRXCR2A6NFK2 248 aa10.9□□□□□ -0.66
CFDP1-211ENST00000612761 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
CFDP1-211ENST00000612761 PTPREP23469 700 aa10.89□□□□□ -0.67
CFDP1-211ENST00000612761 NBR1Q14596 966 aa10.89□□□□□ -0.67
CFDP1-211ENST00000612761 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
CFDP1-211ENST00000612761 LSM11P83369 360 aaKnown RBP eCLIP10.88□□□□□ -0.67
CFDP1-211ENST00000612761 PSEN2P49810 448 aa10.87□□□□□ -0.67
CFDP1-211ENST00000612761 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
CFDP1-211ENST00000612761 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
CFDP1-211ENST00000612761 SEMA3EO15041 775 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms