RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
CFDP1-211ENST00000612761 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
CFDP1-211ENST00000612761 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
CFDP1-211ENST00000612761 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
CFDP1-211ENST00000612761 FOXD1Q16676 465 aa19.76■□□□□ 0.75
CFDP1-211ENST00000612761 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
CFDP1-211ENST00000612761 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
CFDP1-211ENST00000612761 ADRA2BP18089 450 aa18.87■□□□□ 0.61
CFDP1-211ENST00000612761 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
CFDP1-211ENST00000612761 MSH5O43196 834 aa18.33■□□□□ 0.52
CFDP1-211ENST00000612761 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
CFDP1-211ENST00000612761 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
CFDP1-211ENST00000612761 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
CFDP1-211ENST00000612761 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
CFDP1-211ENST00000612761 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
CFDP1-211ENST00000612761 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
CFDP1-211ENST00000612761 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
CFDP1-211ENST00000612761 KCNA4P22459 653 aa16.75■□□□□ 0.27
CFDP1-211ENST00000612761 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
CFDP1-211ENST00000612761 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
CFDP1-211ENST00000612761 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
CFDP1-211ENST00000612761 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
CFDP1-211ENST00000612761 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
CFDP1-211ENST00000612761 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
CFDP1-211ENST00000612761 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
CFDP1-211ENST00000612761 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
CFDP1-211ENST00000612761 RNF39Q9H2S5 420 aa15.66■□□□□ 0.1
CFDP1-211ENST00000612761 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
CFDP1-211ENST00000612761 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
CFDP1-211ENST00000612761 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
CFDP1-211ENST00000612761 ZBTB22O15209 634 aa15.39■□□□□ 0.05
CFDP1-211ENST00000612761 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
CFDP1-211ENST00000612761 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
CFDP1-211ENST00000612761 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
CFDP1-211ENST00000612761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
CFDP1-211ENST00000612761 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
CFDP1-211ENST00000612761 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
CFDP1-211ENST00000612761 APLP2Q06481 763 aa15.21■□□□□ 0.03
CFDP1-211ENST00000612761 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
CFDP1-211ENST00000612761 SPINK5Q9NQ38 1064 aaPredicted RBP15.1■□□□□ 0.01
CFDP1-211ENST00000612761 CAPN15O75808 1086 aa15.09■□□□□ 0.01
CFDP1-211ENST00000612761 ZNF219Q9P2Y4 722 aaPredicted RBP14.98□□□□□ -0.01
CFDP1-211ENST00000612761 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
CFDP1-211ENST00000612761 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
CFDP1-211ENST00000612761 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
CFDP1-211ENST00000612761 DSG3P32926 999 aa14.84□□□□□ -0.03
CFDP1-211ENST00000612761 ABCB7O75027 752 aa14.77□□□□□ -0.05
CFDP1-211ENST00000612761 POLA2Q14181 598 aa14.7□□□□□ -0.06
CFDP1-211ENST00000612761 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
CFDP1-211ENST00000612761 FBLN2P98095 1184 aa14.36□□□□□ -0.11
CFDP1-211ENST00000612761 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
CFDP1-211ENST00000612761 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
CFDP1-211ENST00000612761 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
CFDP1-211ENST00000612761 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
CFDP1-211ENST00000612761 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
CFDP1-211ENST00000612761 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
CFDP1-211ENST00000612761 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
CFDP1-211ENST00000612761 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
CFDP1-211ENST00000612761 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
CFDP1-211ENST00000612761 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CFDP1-211ENST00000612761 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
CFDP1-211ENST00000612761 FKBP8Q14318 412 aa13.77□□□□□ -0.21
CFDP1-211ENST00000612761 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
CFDP1-211ENST00000612761 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
CFDP1-211ENST00000612761 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
CFDP1-211ENST00000612761 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
CFDP1-211ENST00000612761 PROM2Q8N271 834 aa13.63□□□□□ -0.23
CFDP1-211ENST00000612761 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
CFDP1-211ENST00000612761 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
CFDP1-211ENST00000612761 PRR29P0C7W0 189 aa13.48□□□□□ -0.25
CFDP1-211ENST00000612761 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
CFDP1-211ENST00000612761 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
CFDP1-211ENST00000612761 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
CFDP1-211ENST00000612761 POTEHQ6S545 545 aa13.36□□□□□ -0.27
CFDP1-211ENST00000612761 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
CFDP1-211ENST00000612761 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
CFDP1-211ENST00000612761 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
CFDP1-211ENST00000612761 MIER1Q8N108 512 aa13.22□□□□□ -0.29
CFDP1-211ENST00000612761 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
CFDP1-211ENST00000612761 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
CFDP1-211ENST00000612761 FARP1Q9Y4F1 1045 aaPredicted RBP13.16□□□□□ -0.3
CFDP1-211ENST00000612761 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-211ENST00000612761 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
CFDP1-211ENST00000612761 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.32
CFDP1-211ENST00000612761 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
CFDP1-211ENST00000612761 HAX1O00165 279 aa13.05□□□□□ -0.32
CFDP1-211ENST00000612761 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
CFDP1-211ENST00000612761 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
CFDP1-211ENST00000612761 CD44P16070 742 aaKnown RBP12.94□□□□□ -0.34
CFDP1-211ENST00000612761 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
CFDP1-211ENST00000612761 PAK3O75914 559 aaPredicted RBP12.9□□□□□ -0.34
CFDP1-211ENST00000612761 EVX2Q03828 476 aa12.88□□□□□ -0.35
CFDP1-211ENST00000612761 NUBP1P53384 320 aa12.86□□□□□ -0.35
CFDP1-211ENST00000612761 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
CFDP1-211ENST00000612761 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
CFDP1-211ENST00000612761 SPOCK2Q92563 424 aa12.84□□□□□ -0.35
CFDP1-211ENST00000612761 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
CFDP1-211ENST00000612761 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
CFDP1-211ENST00000612761 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
CFDP1-211ENST00000612761 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms