RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ZNF644Q9H582 1327 aaPredicted RBP26.54■■□□□ 1.84
SREK1-216ENST00000612404 ABCA9Q8IUA7 1624 aa26.54■■□□□ 1.84
SREK1-216ENST00000612404 CDC42BPBQ9Y5S2 1711 aa26.53■■□□□ 1.84
SREK1-216ENST00000612404 ARHGAP5Q13017 1502 aa26.52■■□□□ 1.84
SREK1-216ENST00000612404 PLCH2O75038 1416 aa26.5■■□□□ 1.83
SREK1-216ENST00000612404 CAMSAP2Q08AD1 1489 aa26.5■■□□□ 1.83
SREK1-216ENST00000612404 EFCAB2Q5VUJ9 269 aa26.44■■□□□ 1.82
SREK1-216ENST00000612404 CD109Q6YHK3 1445 aa26.43■■□□□ 1.82
SREK1-216ENST00000612404 SAMD9LQ8IVG5 1584 aa26.42■■□□□ 1.82
SREK1-216ENST00000612404 FAM69CQ0P6D2 419 aa26.41■■□□□ 1.82
SREK1-216ENST00000612404 ARAP3Q8WWN8 1544 aa26.41■■□□□ 1.82
SREK1-216ENST00000612404 DIP2BQ9P265 1576 aa26.4■■□□□ 1.82
SREK1-216ENST00000612404 GLI2P10070 1586 aa26.38■■□□□ 1.81
SREK1-216ENST00000612404 FANCAO15360 1455 aa26.38■■□□□ 1.81
SREK1-216ENST00000612404 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
SREK1-216ENST00000612404 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
SREK1-216ENST00000612404 HNRNPMP52272 730 aaKnown RBP eCLIP26.37■■□□□ 1.813e-7■■■■□ 25
SREK1-216ENST00000612404 DAPK1P53355 1430 aa26.37■■□□□ 1.81
SREK1-216ENST00000612404 ABCC5O15440 1437 aa26.35■■□□□ 1.81
SREK1-216ENST00000612404 CHIC2Q9UKJ5 165 aa26.35■■□□□ 1.81
SREK1-216ENST00000612404 MAP3K4Q9Y6R4 1608 aa26.34■■□□□ 1.81
SREK1-216ENST00000612404 PLEKHH2Q8IVE3 1493 aa26.34■■□□□ 1.81
SREK1-216ENST00000612404 SYCP2Q9BX26 1530 aa26.34■■□□□ 1.81
SREK1-216ENST00000612404 MBD5Q9P267 1494 aa26.31■■□□□ 1.8
SREK1-216ENST00000612404 KIAA1107Q9UPP5 1409 aa26.31■■□□□ 1.8
SREK1-216ENST00000612404 ARHGEF5Q12774 1597 aa26.29■■□□□ 1.8
SREK1-216ENST00000612404 ABCC1P33527 1531 aa26.29■■□□□ 1.8
SREK1-216ENST00000612404 ARHGEF12Q9NZN5 1544 aa26.28■■□□□ 1.8
SREK1-216ENST00000612404 KIF13AQ9H1H9 1805 aa26.27■■□□□ 1.8
SREK1-216ENST00000612404 CFAP74Q9C0B2 1584 aa26.27■■□□□ 1.8
SREK1-216ENST00000612404 CROCC2H7BZ55 1655 aa26.27■■□□□ 1.8
SREK1-216ENST00000612404 CCDC141Q6ZP82 1450 aa26.27■■□□□ 1.8
SREK1-216ENST00000612404 RSPH4AQ5TD94 716 aa26.27■■□□□ 1.8
SREK1-216ENST00000612404 AKNAQ7Z591 1439 aa26.27■■□□□ 1.8
SREK1-216ENST00000612404 ADGRL1O94910 1474 aa26.26■■□□□ 1.79
SREK1-216ENST00000612404 TSPY4P0CV99 314 aa26.26■■□□□ 1.79
SREK1-216ENST00000612404 TSPY10P0CW01 314 aa26.26■■□□□ 1.79
SREK1-216ENST00000612404 TSPOAP1O95153 1857 aa26.24■■□□□ 1.79
SREK1-216ENST00000612404 RRP7BPQ9NSQ0 103 aa26.23■■□□□ 1.79
SREK1-216ENST00000612404 SCAPERQ9BY12 1400 aa26.22■■□□□ 1.79
SREK1-216ENST00000612404 C9orf84Q5VXU9 1444 aa26.21■■□□□ 1.79
SREK1-216ENST00000612404 SETD5Q9C0A6 1442 aa26.21■■□□□ 1.79
SREK1-216ENST00000612404 NEO1Q92859 1461 aa26.21■■□□□ 1.79
SREK1-216ENST00000612404 SHANK2Q9UPX8 1470 aa26.21■■□□□ 1.79
SREK1-216ENST00000612404 TRAPPC8Q9Y2L5 1435 aa26.2■■□□□ 1.79
SREK1-216ENST00000612404 HFM1A2PYH4 1435 aa26.2■■□□□ 1.78
SREK1-216ENST00000612404 ROCK1Q13464 1354 aa26.19■■□□□ 1.78
SREK1-216ENST00000612404 ADGBQ8N7X0 1667 aa26.18■■□□□ 1.78
SREK1-216ENST00000612404 AFAP1Q8N556 730 aa26.17■■□□□ 1.78
SREK1-216ENST00000612404 NAIPQ13075 1403 aa26.17■■□□□ 1.78
SREK1-216ENST00000612404 RAB3GAP2Q9H2M9 1393 aa26.17■■□□□ 1.78
SREK1-216ENST00000612404 PPRC1Q5VV67 1664 aaKnown RBP26.16■■□□□ 1.78
SREK1-216ENST00000612404 ANKRD30AQ9BXX3 1397 aa26.16■■□□□ 1.78
SREK1-216ENST00000612404 TEX14Q8IWB6 1497 aa26.16■■□□□ 1.78
SREK1-216ENST00000612404 TRHP20396 242 aaPredicted RBP26.15■■□□□ 1.78
SREK1-216ENST00000612404 ADGRL2O95490 1459 aa26.15■■□□□ 1.78
SREK1-216ENST00000612404 NCOA1Q15788 1441 aa26.14■■□□□ 1.78
SREK1-216ENST00000612404 GCC2Q8IWJ2 1684 aa26.12■■□□□ 1.77
SREK1-216ENST00000612404 SPAG9O60271 1321 aaKnown RBP26.11■■□□□ 1.77
SREK1-216ENST00000612404 MAST1Q9Y2H9 1570 aa26.11■■□□□ 1.77
SREK1-216ENST00000612404 ZNF518AQ6AHZ1 1483 aa26.1■■□□□ 1.77
SREK1-216ENST00000612404 POGZQ7Z3K3 1410 aa26.09■■□□□ 1.77
SREK1-216ENST00000612404 DENND4BO75064 1496 aaPredicted RBP26.08■■□□□ 1.77
SREK1-216ENST00000612404 MYT1LQ9UL68 1186 aa26.08■■□□□ 1.76
SREK1-216ENST00000612404 KIF15Q9NS87 1388 aa26.07■■□□□ 1.76
SREK1-216ENST00000612404 RAPGEF3O95398 923 aa26.05■■□□□ 1.76
SREK1-216ENST00000612404 ZFYVE16Q7Z3T8 1539 aa26.04■■□□□ 1.76
SREK1-216ENST00000612404 HRCP23327 699 aa26.03■■□□□ 1.76
SREK1-216ENST00000612404 CCER1Q8TC90 406 aaPredicted RBP26.03■■□□□ 1.76
SREK1-216ENST00000612404 RTEL1-TNFRSF6BF6WH68 1400 aa26.03■■□□□ 1.76
SREK1-216ENST00000612404 KDM6BO15054 1643 aa26.03■■□□□ 1.76
SREK1-216ENST00000612404 PLXNC1O60486 1568 aa26.02■■□□□ 1.76
SREK1-216ENST00000612404 ATP7AQ04656 1500 aa26.02■■□□□ 1.76
SREK1-216ENST00000612404 KDM5CP41229 1560 aa26.01■■□□□ 1.75
SREK1-216ENST00000612404 INO80Q9ULG1 1556 aaPredicted RBP26.01■■□□□ 1.75
SREK1-216ENST00000612404 ANKRD50Q9ULJ7 1429 aa26■■□□□ 1.75
SREK1-216ENST00000612404 RICTORQ6R327 1708 aa25.99■■□□□ 1.75
SREK1-216ENST00000612404 HECW2Q9P2P5 1572 aa25.96■■□□□ 1.75
SREK1-216ENST00000612404 KIDINS220Q9ULH0 1771 aa25.95■■□□□ 1.75
SREK1-216ENST00000612404 TRIM52Q96A61 297 aa25.94■■□□□ 1.74
SREK1-216ENST00000612404 MLH3Q9UHC1 1453 aa25.94■■□□□ 1.74
SREK1-216ENST00000612404 DUOX2Q9NRD8 1548 aa25.94■■□□□ 1.74
SREK1-216ENST00000612404 FRMPD1Q5SYB0 1578 aa25.94■■□□□ 1.74
SREK1-216ENST00000612404 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
SREK1-216ENST00000612404 COL17A1Q9UMD9 1497 aaPredicted RBP25.89■■□□□ 1.74
SREK1-216ENST00000612404 ACIN1Q9UKV3 1341 aaKnown RBP25.88■■□□□ 1.73
SREK1-216ENST00000612404 ERBINQ96RT1 1412 aa25.88■■□□□ 1.73
SREK1-216ENST00000612404 ZMYM4Q5VZL5 1548 aa25.86■■□□□ 1.73
SREK1-216ENST00000612404 ABCA6Q8N139 1617 aa25.85■■□□□ 1.73
SREK1-216ENST00000612404 DHX29Q7Z478 1369 aaKnown RBP25.83■■□□□ 1.73
SREK1-216ENST00000612404 YEATS2Q9ULM3 1422 aa25.82■■□□□ 1.72
SREK1-216ENST00000612404 A2MP01023 1474 aa25.82■■□□□ 1.72
SREK1-216ENST00000612404 MAGI2Q86UL8 1455 aa25.81■■□□□ 1.72
SREK1-216ENST00000612404 DIP2CQ9Y2E4 1556 aa25.81■■□□□ 1.72
SREK1-216ENST00000612404 NUP155O75694 1391 aa25.79■■□□□ 1.72
SREK1-216ENST00000612404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.78■■□□□ 1.722e-7■■■□□ 16.1
SREK1-216ENST00000612404 MPHOSPH9Q99550 1183 aa25.78■■□□□ 1.72
SREK1-216ENST00000612404 KIF3BO15066 747 aa25.76■■□□□ 1.71
SREK1-216ENST00000612404 SLC4A1APQ9BWU0 796 aaKnown RBP25.76■■□□□ 1.71
SREK1-216ENST00000612404 UNC13BO14795 1591 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms