RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
SCFD2-204ENST00000611795 ARHGAP5Q13017 1502 aa29.24■■■□□ 2.27
SCFD2-204ENST00000611795 RRBP1Q9P2E9 1410 aaKnown RBP29.24■■■□□ 2.27
SCFD2-204ENST00000611795 CFDP1Q9UEE9 299 aaPredicted RBP29.23■■■□□ 2.27
SCFD2-204ENST00000611795 PTPN23Q9H3S7 1636 aa29.21■■■□□ 2.27
SCFD2-204ENST00000611795 SAMD9LQ8IVG5 1584 aa29.2■■■□□ 2.26
SCFD2-204ENST00000611795 TCOF1Q13428 1488 aaKnown RBP29.2■■■□□ 2.26
SCFD2-204ENST00000611795 TSPOAP1O95153 1857 aa29.19■■■□□ 2.26
SCFD2-204ENST00000611795 ZNF644Q9H582 1327 aaPredicted RBP29.19■■■□□ 2.26
SCFD2-204ENST00000611795 FANCAO15360 1455 aa29.18■■■□□ 2.26
SCFD2-204ENST00000611795 TRHP20396 242 aaPredicted RBP29.18■■■□□ 2.26
SCFD2-204ENST00000611795 CAMSAP2Q08AD1 1489 aa29.16■■■□□ 2.26
SCFD2-204ENST00000611795 EFCAB2Q5VUJ9 269 aa29.16■■■□□ 2.26
SCFD2-204ENST00000611795 ZNF777Q9ULD5 760 aaPredicted RBP29.14■■■□□ 2.25
SCFD2-204ENST00000611795 CFAP74Q9C0B2 1584 aa29.12■■■□□ 2.25
SCFD2-204ENST00000611795 NEO1Q92859 1461 aa29.1■■■□□ 2.25
SCFD2-204ENST00000611795 ABCC1P33527 1531 aa29.1■■■□□ 2.25
SCFD2-204ENST00000611795 AKNAQ7Z591 1439 aa29.09■■■□□ 2.25
SCFD2-204ENST00000611795 ARHGEF12Q9NZN5 1544 aa29.09■■■□□ 2.25
SCFD2-204ENST00000611795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.09■■■□□ 2.25
SCFD2-204ENST00000611795 TEX14Q8IWB6 1497 aa29.08■■■□□ 2.25
SCFD2-204ENST00000611795 FAM50AQ14320 339 aaKnown RBP29.07■■■□□ 2.24
SCFD2-204ENST00000611795 SYCP2Q9BX26 1530 aa29.06■■■□□ 2.24
SCFD2-204ENST00000611795 MBD5Q9P267 1494 aa29.05■■■□□ 2.24
SCFD2-204ENST00000611795 KIAA1107Q9UPP5 1409 aa29.05■■■□□ 2.24
SCFD2-204ENST00000611795 PLEKHH2Q8IVE3 1493 aa29.05■■■□□ 2.24
SCFD2-204ENST00000611795 ADGRL1O94910 1474 aa29.04■■■□□ 2.24
SCFD2-204ENST00000611795 HNRNPMP52272 730 aaKnown RBP eCLIP29.01■■■□□ 2.231e-8■■■■■ 29.3
SCFD2-204ENST00000611795 TRIM26Q12899 539 aaPredicted RBP29■■■□□ 2.23
SCFD2-204ENST00000611795 ARHGEF5Q12774 1597 aa29■■■□□ 2.23
SCFD2-204ENST00000611795 DNMT1P26358 1616 aaKnown RBP29■■■□□ 2.23
SCFD2-204ENST00000611795 SCAPERQ9BY12 1400 aa29■■■□□ 2.23
SCFD2-204ENST00000611795 TRAPPC8Q9Y2L5 1435 aa28.98■■■□□ 2.23
SCFD2-204ENST00000611795 ABCC5O15440 1437 aa28.97■■■□□ 2.23
SCFD2-204ENST00000611795 DAPK1P53355 1430 aa28.95■■■□□ 2.23
SCFD2-204ENST00000611795 PTPRKQ15262 1439 aa28.95■■■□□ 2.23
SCFD2-204ENST00000611795 CROCC2H7BZ55 1655 aa28.93■■■□□ 2.22
SCFD2-204ENST00000611795 CCDC141Q6ZP82 1450 aa28.93■■■□□ 2.22
SCFD2-204ENST00000611795 COL17A1Q9UMD9 1497 aaPredicted RBP28.93■■■□□ 2.22
SCFD2-204ENST00000611795 POGZQ7Z3K3 1410 aa28.92■■■□□ 2.22
SCFD2-204ENST00000611795 FRMPD1Q5SYB0 1578 aa28.92■■■□□ 2.22
SCFD2-204ENST00000611795 DENND4BO75064 1496 aaPredicted RBP28.91■■■□□ 2.22
SCFD2-204ENST00000611795 RICTORQ6R327 1708 aa28.9■■■□□ 2.22
SCFD2-204ENST00000611795 ITGAEP38570 1179 aa28.89■■■□□ 2.21
SCFD2-204ENST00000611795 AFAP1Q8N556 730 aa28.89■■■□□ 2.21
SCFD2-204ENST00000611795 KDM5CP41229 1560 aa28.87■■■□□ 2.21
SCFD2-204ENST00000611795 RSPH4AQ5TD94 716 aa28.87■■■□□ 2.21
SCFD2-204ENST00000611795 ZNF518AQ6AHZ1 1483 aa28.86■■■□□ 2.21
SCFD2-204ENST00000611795 SHANK2Q9UPX8 1470 aa28.86■■■□□ 2.21
SCFD2-204ENST00000611795 RAPGEF3O95398 923 aa28.86■■■□□ 2.21
SCFD2-204ENST00000611795 MAST1Q9Y2H9 1570 aa28.84■■■□□ 2.21
SCFD2-204ENST00000611795 C9orf84Q5VXU9 1444 aa28.83■■■□□ 2.21
SCFD2-204ENST00000611795 INO80Q9ULG1 1556 aaPredicted RBP28.8■■■□□ 2.2
SCFD2-204ENST00000611795 ZFYVE16Q7Z3T8 1539 aa28.79■■■□□ 2.2
SCFD2-204ENST00000611795 CHIC2Q9UKJ5 165 aa28.79■■■□□ 2.2
SCFD2-204ENST00000611795 ZMYM4Q5VZL5 1548 aa28.79■■■□□ 2.2
SCFD2-204ENST00000611795 KDM6BO15054 1643 aa28.78■■■□□ 2.2
SCFD2-204ENST00000611795 ADGRL2O95490 1459 aa28.78■■■□□ 2.2
SCFD2-204ENST00000611795 TSPY4P0CV99 314 aa28.77■■■□□ 2.2
SCFD2-204ENST00000611795 TSPY10P0CW01 314 aa28.77■■■□□ 2.2
SCFD2-204ENST00000611795 ADGBQ8N7X0 1667 aa28.77■■■□□ 2.2
SCFD2-204ENST00000611795 SPAG9O60271 1321 aaKnown RBP28.77■■■□□ 2.2
SCFD2-204ENST00000611795 KIDINS220Q9ULH0 1771 aa28.76■■■□□ 2.19
SCFD2-204ENST00000611795 MLH3Q9UHC1 1453 aa28.75■■■□□ 2.19
SCFD2-204ENST00000611795 ATP7AQ04656 1500 aa28.75■■■□□ 2.19
SCFD2-204ENST00000611795 PCGF6Q9BYE7 350 aa28.75■■■□□ 2.19
SCFD2-204ENST00000611795 HECW2Q9P2P5 1572 aa28.75■■■□□ 2.19
SCFD2-204ENST00000611795 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
SCFD2-204ENST00000611795 ROCK1Q13464 1354 aa28.73■■■□□ 2.19
SCFD2-204ENST00000611795 NCOA1Q15788 1441 aa28.72■■■□□ 2.19
SCFD2-204ENST00000611795 PLXNC1O60486 1568 aa28.71■■■□□ 2.19
SCFD2-204ENST00000611795 YEATS2Q9ULM3 1422 aa28.68■■■□□ 2.18
SCFD2-204ENST00000611795 ANKRD30AQ9BXX3 1397 aa28.68■■■□□ 2.18
SCFD2-204ENST00000611795 RRP7BPQ9NSQ0 103 aa28.68■■■□□ 2.18
SCFD2-204ENST00000611795 ABCA6Q8N139 1617 aa28.68■■■□□ 2.18
SCFD2-204ENST00000611795 MAGI2Q86UL8 1455 aa28.66■■■□□ 2.18
SCFD2-204ENST00000611795 NAIPQ13075 1403 aa28.65■■■□□ 2.18
SCFD2-204ENST00000611795 HFM1A2PYH4 1435 aa28.64■■■□□ 2.18
SCFD2-204ENST00000611795 DIP2CQ9Y2E4 1556 aa28.64■■■□□ 2.18
SCFD2-204ENST00000611795 GCC2Q8IWJ2 1684 aa28.64■■■□□ 2.18
SCFD2-204ENST00000611795 KIF15Q9NS87 1388 aa28.63■■■□□ 2.17
SCFD2-204ENST00000611795 MYT1LQ9UL68 1186 aa28.61■■■□□ 2.17
SCFD2-204ENST00000611795 ARHGEF40Q8TER5 1519 aa28.6■■■□□ 2.17
SCFD2-204ENST00000611795 DUOX2Q9NRD8 1548 aa28.58■■■□□ 2.17
SCFD2-204ENST00000611795 SETD5Q9C0A6 1442 aa28.56■■■□□ 2.16
SCFD2-204ENST00000611795 A2MP01023 1474 aa28.54■■■□□ 2.16
SCFD2-204ENST00000611795 ANKRD50Q9ULJ7 1429 aa28.53■■■□□ 2.16
SCFD2-204ENST00000611795 ATP10AO60312 1499 aa28.53■■■□□ 2.16
SCFD2-204ENST00000611795 DHX29Q7Z478 1369 aaKnown RBP28.53■■■□□ 2.16
SCFD2-204ENST00000611795 SIGLEC1Q9BZZ2 1709 aa28.51■■■□□ 2.15
SCFD2-204ENST00000611795 REREQ9P2R6 1566 aa28.5■■■□□ 2.15
SCFD2-204ENST00000611795 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
SCFD2-204ENST00000611795 ERBINQ96RT1 1412 aa28.5■■■□□ 2.15
SCFD2-204ENST00000611795 EIF2AK4Q9P2K8 1649 aaKnown RBP28.45■■■□□ 2.14
SCFD2-204ENST00000611795 BCORL1Q5H9F3 1711 aa28.43■■■□□ 2.14
SCFD2-204ENST00000611795 AGLP35573 1532 aa28.41■■■□□ 2.14
SCFD2-204ENST00000611795 HRCP23327 699 aa28.38■■■□□ 2.13
SCFD2-204ENST00000611795 UNC13BO14795 1591 aa28.37■■■□□ 2.13
SCFD2-204ENST00000611795 DEPDC5O75140 1603 aa28.37■■■□□ 2.13
SCFD2-204ENST00000611795 MROH1Q8NDA8 1641 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms