RNA–Protein interactions for RNA: ENST00000610322.4

RCC1L-201, Transcript of RCC1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1L, Length 2,300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-201ENST00000610322 TCOF1Q13428 1488 aaKnown RBP35.84■■■■□ 3.33
RCC1L-201ENST00000610322 AKNAQ7Z591 1439 aa35.82■■■■□ 3.33
RCC1L-201ENST00000610322 WASHC2AQ641Q2 1341 aa35.81■■■■□ 3.32
RCC1L-201ENST00000610322 DENND4BO75064 1496 aaPredicted RBP35.79■■■■□ 3.32
RCC1L-201ENST00000610322 HSPA5P11021 654 aaKnown RBP35.77■■■■□ 3.32
RCC1L-201ENST00000610322 CARMIL2Q6F5E8 1435 aa35.75■■■■□ 3.31
RCC1L-201ENST00000610322 MAGI3Q5TCQ9 1506 aa35.75■■■■□ 3.31
RCC1L-201ENST00000610322 CNTLNQ9NXG0 1405 aa35.73■■■■□ 3.31
RCC1L-201ENST00000610322 ARID3CA6NKF2 412 aa35.71■■■■□ 3.31
RCC1L-201ENST00000610322 PRG4Q92954 1404 aaPredicted RBP35.69■■■■□ 3.3
RCC1L-201ENST00000610322 EIF4G2P78344 907 aaKnown RBP eCLIP35.68■■■■□ 3.3
RCC1L-201ENST00000610322 IRX6P78412 446 aaPredicted RBP35.67■■■■□ 3.3
RCC1L-201ENST00000610322 ERICH6Q7L0X2 663 aa35.67■■■■□ 3.3
RCC1L-201ENST00000610322 PPP4R2Q9NY27 417 aa35.65■■■■□ 3.3
RCC1L-201ENST00000610322 EPRSP07814 1512 aaKnown RBP35.64■■■■□ 3.3
RCC1L-201ENST00000610322 RRP7BPQ9NSQ0 103 aa35.64■■■■□ 3.3
RCC1L-201ENST00000610322 KDM6BO15054 1643 aa35.64■■■■□ 3.3
RCC1L-201ENST00000610322 CDK13Q14004 1512 aaKnown RBP35.62■■■■□ 3.29
RCC1L-201ENST00000610322 NCOA1Q15788 1441 aa35.61■■■■□ 3.29
RCC1L-201ENST00000610322 PLB1Q6P1J6 1458 aa35.61■■■■□ 3.29
RCC1L-201ENST00000610322 RAPGEF6Q8TEU7 1601 aa35.61■■■■□ 3.29
RCC1L-201ENST00000610322 MIA2Q96PC5 1412 aa35.6■■■■□ 3.29
RCC1L-201ENST00000610322 NUP153P49790 1475 aaKnown RBP35.58■■■■□ 3.29
RCC1L-201ENST00000610322 SHROOM2Q13796 1616 aa35.58■■■■□ 3.29
RCC1L-201ENST00000610322 CCDC7Q96M83 1385 aa35.55■■■■□ 3.28
RCC1L-201ENST00000610322 CLASP1Q7Z460 1538 aa35.55■■■■□ 3.28
RCC1L-201ENST00000610322 MPHOSPH9Q99550 1183 aa35.54■■■■□ 3.28
RCC1L-201ENST00000610322 CHIC2Q9UKJ5 165 aa35.54■■■■□ 3.28
RCC1L-201ENST00000610322 PRKRIP1Q9H875 184 aaPredicted RBP35.51■■■■□ 3.28
RCC1L-201ENST00000610322 MYT1LQ9UL68 1186 aa35.51■■■■□ 3.28
RCC1L-201ENST00000610322 ERCC6L2Q5T890 1561 aa35.51■■■■□ 3.27
RCC1L-201ENST00000610322 L3MBTL2Q969R5 705 aa35.5■■■■□ 3.27
RCC1L-201ENST00000610322 CCDC184Q52MB2 194 aa35.49■■■■□ 3.27
RCC1L-201ENST00000610322 POLR1AO95602 1720 aaPredicted RBP35.47■■■■□ 3.27
RCC1L-201ENST00000610322 ZBED9Q6R2W3 1325 aa35.46■■■■□ 3.27
RCC1L-201ENST00000610322 PTPRGP23470 1445 aa35.46■■■■□ 3.27
RCC1L-201ENST00000610322 RPRD2Q5VT52 1461 aaKnown RBP35.45■■■■□ 3.27
RCC1L-201ENST00000610322 C11orf95C9JLR9 678 aaPredicted RBP35.45■■■■□ 3.27
RCC1L-201ENST00000610322 ABCA8O94911 1581 aa35.42■■■■□ 3.26
RCC1L-201ENST00000610322 TEX14Q8IWB6 1497 aa35.42■■■■□ 3.26
RCC1L-201ENST00000610322 ANKRD30BQ9BXX2 1392 aa35.42■■■■□ 3.26
RCC1L-201ENST00000610322 ROCK1Q13464 1354 aa35.41■■■■□ 3.26
RCC1L-201ENST00000610322 SPATA31E1Q6ZUB1 1445 aa35.39■■■■□ 3.26
RCC1L-201ENST00000610322 MRS2Q9HD23 443 aa35.37■■■■□ 3.25
RCC1L-201ENST00000610322 DAPK1P53355 1430 aa35.32■■■■□ 3.25
RCC1L-201ENST00000610322 NBPF8Q3BBV2 869 aa35.32■■■■□ 3.24
RCC1L-201ENST00000610322 FAM9BQ8IZU0 186 aa35.32■■■■□ 3.24
RCC1L-201ENST00000610322 DNMT1P26358 1616 aaKnown RBP35.31■■■■□ 3.24
RCC1L-201ENST00000610322 FOXD1Q16676 465 aa35.29■■■■□ 3.24
RCC1L-201ENST00000610322 B4GALNT3Q6L9W6 998 aa35.29■■■■□ 3.24
RCC1L-201ENST00000610322 KIF7Q2M1P5 1343 aa35.29■■■■□ 3.24
RCC1L-201ENST00000610322 ATP10BO94823 1461 aa35.26■■■■□ 3.23
RCC1L-201ENST00000610322 OSCARQ8IYS5 282 aa35.25■■■■□ 3.23
RCC1L-201ENST00000610322 ABCC5O15440 1437 aa35.23■■■■□ 3.23
RCC1L-201ENST00000610322 TROQ12816 1431 aaPredicted RBP35.19■■■■□ 3.22
RCC1L-201ENST00000610322 SMG6Q86US8 1419 aaKnown RBP35.18■■■■□ 3.22
RCC1L-201ENST00000610322 NOP58Q9Y2X3 529 aaKnown RBP35.13■■■■□ 3.21
RCC1L-201ENST00000610322 MBD5Q9P267 1494 aa35.13■■■■□ 3.21
RCC1L-201ENST00000610322 SLC4A1APQ9BWU0 796 aaKnown RBP35.12■■■■□ 3.21
RCC1L-201ENST00000610322 PLEKHD1A6NEE1 506 aa35.11■■■■□ 3.21
RCC1L-201ENST00000610322 DHX29Q7Z478 1369 aaKnown RBP35.11■■■■□ 3.21
RCC1L-201ENST00000610322 DEKP35659 375 aaKnown RBP35.11■■■■□ 3.21
RCC1L-201ENST00000610322 ABCC2Q92887 1545 aa35.09■■■■□ 3.21
RCC1L-201ENST00000610322 PZPP20742 1482 aa35.09■■■■□ 3.21
RCC1L-201ENST00000610322 KIF14Q15058 1648 aa35.09■■■■□ 3.21
RCC1L-201ENST00000610322 RNF123Q5XPI4 1314 aa35.06■■■■□ 3.2
RCC1L-201ENST00000610322 ADCY10Q96PN6 1610 aa35.02■■■■□ 3.2
RCC1L-201ENST00000610322 BCORL1Q5H9F3 1711 aa35.01■■■■□ 3.2
RCC1L-201ENST00000610322 ARID4BQ4LE39 1312 aaPredicted RBP35.01■■■■□ 3.19
RCC1L-201ENST00000610322 NUDCQ9Y266 331 aa35■■■■□ 3.19
RCC1L-201ENST00000610322 ZNF644Q9H582 1327 aaPredicted RBP35■■■■□ 3.19
RCC1L-201ENST00000610322 ADGBQ8N7X0 1667 aa35■■■■□ 3.19
RCC1L-201ENST00000610322 USP47Q96K76 1375 aa34.96■■■■□ 3.19
RCC1L-201ENST00000610322 KIAA1107Q9UPP5 1409 aa34.96■■■■□ 3.19
RCC1L-201ENST00000610322 KDM5CP41229 1560 aa34.96■■■■□ 3.19
RCC1L-201ENST00000610322 UHRF1BP1LA0JNW5 1464 aa34.95■■■■□ 3.19
RCC1L-201ENST00000610322 GPATCH8Q9UKJ3 1502 aaKnown RBP34.93■■■■□ 3.18
RCC1L-201ENST00000610322 ADGRL2O95490 1459 aa34.93■■■■□ 3.18
RCC1L-201ENST00000610322 CAMSAP2Q08AD1 1489 aa34.92■■■■□ 3.18
RCC1L-201ENST00000610322 ITSN2Q9NZM3 1697 aa34.91■■■■□ 3.18
RCC1L-201ENST00000610322 PAK3O75914 559 aaPredicted RBP34.91■■■■□ 3.18
RCC1L-201ENST00000610322 CCDC136Q96JN2 1154 aa34.9■■■■□ 3.18
RCC1L-201ENST00000610322 ABCC10Q5T3U5 1492 aa34.9■■■■□ 3.18
RCC1L-201ENST00000610322 ANP32AP39687 249 aaKnown RBP34.88■■■■□ 3.17
RCC1L-201ENST00000610322 ZCCHC11Q5TAX3 1644 aaKnown RBP34.88■■■■□ 3.17
RCC1L-201ENST00000610322 CFDP1Q9UEE9 299 aaPredicted RBP34.88■■■■□ 3.17
RCC1L-201ENST00000610322 CROCC2H7BZ55 1655 aa34.88■■■■□ 3.17
RCC1L-201ENST00000610322 ROCK2O75116 1388 aaKnown RBP34.87■■■■□ 3.17
RCC1L-201ENST00000610322 UHRF1BP1Q6BDS2 1440 aa34.86■■■■□ 3.17
RCC1L-201ENST00000610322 IPO9Q96P70 1041 aaKnown RBP34.86■■■■□ 3.17
RCC1L-201ENST00000610322 NBR1Q14596 966 aa34.83■■■■□ 3.17
RCC1L-201ENST00000610322 RALGAPBQ86X10 1494 aa34.82■■■■□ 3.17
RCC1L-201ENST00000610322 ZNF777Q9ULD5 760 aaPredicted RBP34.82■■■■□ 3.16
RCC1L-201ENST00000610322 PNISRQ8TF01 805 aaKnown RBP34.81■■■■□ 3.16
RCC1L-201ENST00000610322 CDC42BPAQ5VT25 1732 aa34.8■■■■□ 3.16
RCC1L-201ENST00000610322 ARHGEF12Q9NZN5 1544 aa34.75■■■■□ 3.15
RCC1L-201ENST00000610322 PKD2Q13563 968 aa34.75■■■■□ 3.15
RCC1L-201ENST00000610322 LRPPRCP42704 1394 aaKnown RBP34.74■■■■□ 3.15
RCC1L-201ENST00000610322 ANKRD30AQ9BXX3 1397 aa34.73■■■■□ 3.15
RCC1L-201ENST00000610322 ZBTB47Q9UFB7 747 aaPredicted RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms