RNA–Protein interactions for RNA: ENST00000610322.4

RCC1L-201, Transcript of RCC1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1L, Length 2,300 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-201ENST00000610322 HNRNPMP52272 730 aaKnown RBP eCLIP34.54■■■■□ 3.122e-10■■■□□ 19.1
RCC1L-201ENST00000610322 DDX3XO00571 662 aaKnown RBP eCLIP28.06■■■□□ 2.085e-10■■■□□ 18.7
RCC1L-201ENST00000610322 NIPBLQ6KC79 2804 aaeCLIP17.6■□□□□ 0.416e-10■■■■■ 29
RCC1L-201ENST00000610322 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.58■■□□□ 1.532e-9■■■■■ 29.4
RCC1L-201ENST00000610322 SUB1P53999 127 aaKnown RBP eCLIP20.81■□□□□ 0.925e-9■■■■■ 28.4
RCC1L-201ENST00000610322 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.71■■■■□ 3.151e-8■■■■□ 21.8
RCC1L-201ENST00000610322 RPS3P23396 243 aaKnown RBP eCLIP25.12■■□□□ 1.611e-8■□□□□ 10.9
RCC1L-201ENST00000610322 PABPC4Q13310 644 aaKnown RBP eCLIP27.96■■■□□ 2.073e-8■■□□□ 13
RCC1L-201ENST00000610322 FMR1Q06787 632 aaKnown RBP eCLIP29.51■■■□□ 2.327e-8■■■□□ 16.8
RCC1L-201ENST00000610322 AQRO60306 1485 aaKnown RBP eCLIP37.06■■■■□ 3.521e-7■■■■■ 30.9
RCC1L-201ENST00000610322 GRSF1Q12849 480 aaKnown RBP eCLIP25.93■■□□□ 1.742e-7■■□□□ 14.5
RCC1L-201ENST00000610322 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.43■■□□□ 1.983e-7■■■■■ 149.3
RCC1L-201ENST00000610322 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.57■■■□□ 2.324e-7■■■■□ 23.1
RCC1L-201ENST00000610322 METAP2P50579 478 aaKnown RBP eCLIP29.63■■■□□ 2.335e-7■■■■■ 29.1
RCC1L-201ENST00000610322 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.63■□□□□ 0.579e-7■■■■■ 28.5
RCC1L-201ENST00000610322 UPF1Q92900 1129 aaKnown RBP eCLIP27.56■■■□□ 29e-7■■■■■ 33.5
RCC1L-201ENST00000610322 PPIGQ13427 754 aaKnown RBP eCLIP24.94■■□□□ 1.581e-6■■□□□ 14
RCC1L-201ENST00000610322 FXR2P51116 673 aaKnown RBP eCLIP28.44■■■□□ 2.142e-6■■□□□ 14.2
RCC1L-201ENST00000610322 AKAP1Q92667 903 aaKnown RBP eCLIP24.49■■□□□ 1.512e-6■■■□□ 17.5
RCC1L-201ENST00000610322 YBX3P16989 372 aaKnown RBP eCLIP26.93■■□□□ 1.92e-6■■□□□ 11.5
RCC1L-201ENST00000610322 SF3B1O75533 1304 aaKnown RBP eCLIP26.71■■□□□ 1.873e-6■■■■■ 137.9
RCC1L-201ENST00000610322 EFTUD2Q15029 972 aaKnown RBP eCLIP27.13■■□□□ 1.936e-6■■■□□ 18
RCC1L-201ENST00000610322 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.18■■□□□ 1.628e-6■■■■■ 27.9
Retrieved 23 of 23 RNA–protein pairs in 8.9 ms