RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
CTCFL-220ENST00000608858 FER1L4A9Z1Z3 1794 aa16■□□□□ 0.15
CTCFL-220ENST00000608858 RICTORQ6R327 1708 aa16■□□□□ 0.15
CTCFL-220ENST00000608858 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
CTCFL-220ENST00000608858 ZFYVE16Q7Z3T8 1539 aa15.98■□□□□ 0.15
CTCFL-220ENST00000608858 PREX1Q8TCU6 1659 aa15.96■□□□□ 0.15
CTCFL-220ENST00000608858 UHRF1BP1Q6BDS2 1440 aa15.95■□□□□ 0.14
CTCFL-220ENST00000608858 TTC37Q6PGP7 1564 aa15.95■□□□□ 0.14
CTCFL-220ENST00000608858 SCAPERQ9BY12 1400 aa15.94■□□□□ 0.14
CTCFL-220ENST00000608858 HECW1Q76N89 1606 aa15.94■□□□□ 0.14
CTCFL-220ENST00000608858 LTBP4Q8N2S1 1624 aa15.93■□□□□ 0.14
CTCFL-220ENST00000608858 PTPRTO14522 1441 aa15.93■□□□□ 0.14
CTCFL-220ENST00000608858 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
CTCFL-220ENST00000608858 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
CTCFL-220ENST00000608858 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
CTCFL-220ENST00000608858 NCKAP5LQ9HCH0 1330 aa15.92■□□□□ 0.14
CTCFL-220ENST00000608858 ATP10AO60312 1499 aa15.91■□□□□ 0.14
CTCFL-220ENST00000608858 ZNF335Q9H4Z2 1342 aaPredicted RBP15.91■□□□□ 0.14
CTCFL-220ENST00000608858 ARHGEF12Q9NZN5 1544 aa15.9■□□□□ 0.14
CTCFL-220ENST00000608858 PIP4K2BP78356 416 aa15.9■□□□□ 0.14
CTCFL-220ENST00000608858 AFAP1Q8N556 730 aa15.9■□□□□ 0.14
CTCFL-220ENST00000608858 ESF1Q9H501 851 aaKnown RBP15.9■□□□□ 0.14
CTCFL-220ENST00000608858 NUP153P49790 1475 aaKnown RBP15.9■□□□□ 0.14
CTCFL-220ENST00000608858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.133e-12■■■■■ 30.2
CTCFL-220ENST00000608858 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
CTCFL-220ENST00000608858 SETD1BQ9UPS6 1966 aaKnown RBP15.89■□□□□ 0.13
CTCFL-220ENST00000608858 ATP1B4Q9UN42 357 aaPredicted RBP15.88■□□□□ 0.13
CTCFL-220ENST00000608858 ZMYM4Q5VZL5 1548 aa15.88■□□□□ 0.13
CTCFL-220ENST00000608858 HSPA1LP34931 641 aa15.87■□□□□ 0.13
CTCFL-220ENST00000608858 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
CTCFL-220ENST00000608858 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
CTCFL-220ENST00000608858 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
CTCFL-220ENST00000608858 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.12
CTCFL-220ENST00000608858 PLCH2O75038 1416 aa15.8■□□□□ 0.12
CTCFL-220ENST00000608858 IQSEC2Q5JU85 1478 aa15.79■□□□□ 0.12
CTCFL-220ENST00000608858 TRAPPC8Q9Y2L5 1435 aa15.79■□□□□ 0.12
CTCFL-220ENST00000608858 NCOA1Q15788 1441 aa15.78■□□□□ 0.12
CTCFL-220ENST00000608858 C3P01024 1663 aa15.77■□□□□ 0.12
CTCFL-220ENST00000608858 SAMD9Q5K651 1589 aa15.77■□□□□ 0.11
CTCFL-220ENST00000608858 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
CTCFL-220ENST00000608858 CAMSAP1Q5T5Y3 1602 aa15.76■□□□□ 0.11
CTCFL-220ENST00000608858 MED1Q15648 1581 aaPredicted RBP15.75■□□□□ 0.11
CTCFL-220ENST00000608858 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
CTCFL-220ENST00000608858 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
CTCFL-220ENST00000608858 TOM1O60784 492 aa15.72■□□□□ 0.11
CTCFL-220ENST00000608858 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
CTCFL-220ENST00000608858 PKD2Q13563 968 aa15.68■□□□□ 0.1
CTCFL-220ENST00000608858 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
CTCFL-220ENST00000608858 DIP2CQ9Y2E4 1556 aa15.66■□□□□ 0.1
CTCFL-220ENST00000608858 ARHGAP5Q13017 1502 aa15.64■□□□□ 0.09
CTCFL-220ENST00000608858 CDK11AQ9UQ88 783 aaPredicted RBP15.64■□□□□ 0.09
CTCFL-220ENST00000608858 GGT6Q6P531 493 aa15.62■□□□□ 0.09
CTCFL-220ENST00000608858 RGS17Q9UGC6 210 aaPredicted RBP15.62■□□□□ 0.09
CTCFL-220ENST00000608858 MYO5CQ9NQX4 1742 aa15.62■□□□□ 0.09
CTCFL-220ENST00000608858 ABCA6Q8N139 1617 aa15.61■□□□□ 0.09
CTCFL-220ENST00000608858 ZNF777Q9ULD5 760 aaPredicted RBP15.61■□□□□ 0.09
CTCFL-220ENST00000608858 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
CTCFL-220ENST00000608858 KDM5CP41229 1560 aa15.59■□□□□ 0.09
CTCFL-220ENST00000608858 KIF14Q15058 1648 aa15.59■□□□□ 0.09
CTCFL-220ENST00000608858 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
CTCFL-220ENST00000608858 NPATQ14207 1427 aa15.57■□□□□ 0.08
CTCFL-220ENST00000608858 AGLP35573 1532 aa15.57■□□□□ 0.08
CTCFL-220ENST00000608858 SUPT6HQ7KZ85 1726 aaKnown RBP15.57■□□□□ 0.08
CTCFL-220ENST00000608858 HNRNPMP52272 730 aaKnown RBP eCLIP15.56■□□□□ 0.08
CTCFL-220ENST00000608858 REREQ9P2R6 1566 aa15.54■□□□□ 0.08
CTCFL-220ENST00000608858 TCOF1Q13428 1488 aaKnown RBP15.54■□□□□ 0.08
CTCFL-220ENST00000608858 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
CTCFL-220ENST00000608858 POTEAQ6S8J7 498 aa15.53■□□□□ 0.08
CTCFL-220ENST00000608858 SHANK2Q9UPX8 1470 aa15.52■□□□□ 0.08
CTCFL-220ENST00000608858 PLA2R1Q13018 1463 aa15.52■□□□□ 0.07
CTCFL-220ENST00000608858 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
CTCFL-220ENST00000608858 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
CTCFL-220ENST00000608858 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
CTCFL-220ENST00000608858 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
CTCFL-220ENST00000608858 KIDINS220Q9ULH0 1771 aa15.51■□□□□ 0.07
CTCFL-220ENST00000608858 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
CTCFL-220ENST00000608858 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
CTCFL-220ENST00000608858 CEP170BQ9Y4F5 1589 aaPredicted RBP15.5■□□□□ 0.07
CTCFL-220ENST00000608858 MYO3AQ8NEV4 1616 aa15.48■□□□□ 0.07
CTCFL-220ENST00000608858 ANKLE2Q86XL3 938 aa15.48■□□□□ 0.07
CTCFL-220ENST00000608858 CLIP1P30622 1438 aa15.48■□□□□ 0.07
CTCFL-220ENST00000608858 MROH2AA6NES4 1674 aa15.46■□□□□ 0.07
CTCFL-220ENST00000608858 CPS1P31327 1500 aa15.46■□□□□ 0.07
CTCFL-220ENST00000608858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.46■□□□□ 0.07
CTCFL-220ENST00000608858 ALKQ9UM73 1620 aa15.45■□□□□ 0.06
CTCFL-220ENST00000608858 ABCC1P33527 1531 aa15.43■□□□□ 0.06
CTCFL-220ENST00000608858 DNMT1P26358 1616 aaKnown RBP15.43■□□□□ 0.06
CTCFL-220ENST00000608858 ITSN2Q9NZM3 1697 aa15.43■□□□□ 0.06
CTCFL-220ENST00000608858 ZNF142P52746 1687 aaPredicted RBP15.42■□□□□ 0.06
CTCFL-220ENST00000608858 A2ML1A8K2U0 1454 aa15.42■□□□□ 0.06
CTCFL-220ENST00000608858 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
CTCFL-220ENST00000608858 SAMD9LQ8IVG5 1584 aa15.41■□□□□ 0.06
CTCFL-220ENST00000608858 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
CTCFL-220ENST00000608858 NEURL4Q96JN8 1562 aa15.39■□□□□ 0.05
CTCFL-220ENST00000608858 A2MP01023 1474 aa15.39■□□□□ 0.05
CTCFL-220ENST00000608858 VWDEQ8N2E2 1590 aa15.38■□□□□ 0.05
CTCFL-220ENST00000608858 TNRQ92752 1358 aa15.37■□□□□ 0.05
CTCFL-220ENST00000608858 LRRIQ1Q96JM4 1722 aa15.37■□□□□ 0.05
CTCFL-220ENST00000608858 PREX2Q70Z35 1606 aa15.37■□□□□ 0.05
CTCFL-220ENST00000608858 NPHP4O75161 1426 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms