RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 MAP3K1Q13233 1512 aa37.57■■■■□ 3.61
FOCAD-211ENST00000604036 APLP2Q06481 763 aa37.57■■■■□ 3.6
FOCAD-211ENST00000604036 RAPGEF3O95398 923 aa37.55■■■■□ 3.6
FOCAD-211ENST00000604036 LRRC9Q6ZRR7 1453 aa37.52■■■■□ 3.6
FOCAD-211ENST00000604036 CCNB3Q8WWL7 1395 aa37.52■■■■□ 3.6
FOCAD-211ENST00000604036 DENND4BO75064 1496 aaPredicted RBP37.52■■■■□ 3.6
FOCAD-211ENST00000604036 ADGRL1O94910 1474 aa37.52■■■■□ 3.6
FOCAD-211ENST00000604036 SUPT6HQ7KZ85 1726 aaKnown RBP37.5■■■■□ 3.59
FOCAD-211ENST00000604036 GPATCH8Q9UKJ3 1502 aaKnown RBP37.5■■■■□ 3.59
FOCAD-211ENST00000604036 KANK4Q5T7N3 995 aaPredicted RBP37.49■■■■□ 3.59
FOCAD-211ENST00000604036 SCAPERQ9BY12 1400 aa37.48■■■■□ 3.59
FOCAD-211ENST00000604036 FRMPD1Q5SYB0 1578 aa37.45■■■■□ 3.59
FOCAD-211ENST00000604036 RICTORQ6R327 1708 aa37.44■■■■□ 3.58
FOCAD-211ENST00000604036 NCOA2Q15596 1464 aa37.44■■■■□ 3.58
FOCAD-211ENST00000604036 ZNF777Q9ULD5 760 aaPredicted RBP37.42■■■■□ 3.58
FOCAD-211ENST00000604036 CFDP1Q9UEE9 299 aaPredicted RBP37.41■■■■□ 3.58
FOCAD-211ENST00000604036 KDM4FA0A1W2PPD8 638 aa37.39■■■■□ 3.58
FOCAD-211ENST00000604036 ITSN2Q9NZM3 1697 aa37.38■■■■□ 3.57
FOCAD-211ENST00000604036 POGZQ7Z3K3 1410 aa37.36■■■■□ 3.57
FOCAD-211ENST00000604036 SAMD9LQ8IVG5 1584 aa37.33■■■■□ 3.57
FOCAD-211ENST00000604036 ABCC1P33527 1531 aa37.32■■■■□ 3.57
FOCAD-211ENST00000604036 ZMYM4Q5VZL5 1548 aa37.28■■■■□ 3.56
FOCAD-211ENST00000604036 ARHGEF12Q9NZN5 1544 aa37.28■■■■□ 3.56
FOCAD-211ENST00000604036 ZNF518AQ6AHZ1 1483 aa37.27■■■■□ 3.56
FOCAD-211ENST00000604036 AFAP1Q8N556 730 aa37.27■■■■□ 3.56
FOCAD-211ENST00000604036 HNRNPMP52272 730 aaKnown RBP eCLIP37.23■■■■□ 3.551e-6■■■□□ 17.4
FOCAD-211ENST00000604036 PLEKHH2Q8IVE3 1493 aa37.23■■■■□ 3.55
FOCAD-211ENST00000604036 TRAPPC8Q9Y2L5 1435 aa37.23■■■■□ 3.55
FOCAD-211ENST00000604036 SYCP2Q9BX26 1530 aa37.22■■■■□ 3.55
FOCAD-211ENST00000604036 ZNF644Q9H582 1327 aaPredicted RBP37.22■■■■□ 3.55
FOCAD-211ENST00000604036 MAGI2Q86UL8 1455 aa37.2■■■■□ 3.55
FOCAD-211ENST00000604036 KIAA1107Q9UPP5 1409 aa37.19■■■■□ 3.54
FOCAD-211ENST00000604036 KDM5CP41229 1560 aa37.19■■■■□ 3.54
FOCAD-211ENST00000604036 ZFYVE16Q7Z3T8 1539 aa37.19■■■■□ 3.54
FOCAD-211ENST00000604036 MYT1LQ9UL68 1186 aa37.18■■■■□ 3.54
FOCAD-211ENST00000604036 ARHGEF40Q8TER5 1519 aa37.18■■■■□ 3.54
FOCAD-211ENST00000604036 YEATS2Q9ULM3 1422 aa37.17■■■■□ 3.54
FOCAD-211ENST00000604036 MYOM3Q5VTT5 1437 aa37.15■■■■□ 3.54
FOCAD-211ENST00000604036 HECW2Q9P2P5 1572 aa37.12■■■■□ 3.53
FOCAD-211ENST00000604036 CAMSAP2Q08AD1 1489 aa37.11■■■■□ 3.53
FOCAD-211ENST00000604036 MLH3Q9UHC1 1453 aa37.07■■■■□ 3.53
FOCAD-211ENST00000604036 MIA2Q96PC5 1412 aa37.07■■■■□ 3.52
FOCAD-211ENST00000604036 MBD5Q9P267 1494 aa37.05■■■■□ 3.52
FOCAD-211ENST00000604036 ARID4BQ4LE39 1312 aaPredicted RBP37.05■■■■□ 3.52
FOCAD-211ENST00000604036 SPAG9O60271 1321 aaKnown RBP37.04■■■■□ 3.52
FOCAD-211ENST00000604036 ATP10AO60312 1499 aa37.02■■■■□ 3.52
FOCAD-211ENST00000604036 KIDINS220Q9ULH0 1771 aa37.01■■■■□ 3.52
FOCAD-211ENST00000604036 PPARGC1BQ86YN6 1023 aaKnown RBP37■■■■□ 3.51
FOCAD-211ENST00000604036 DIP2CQ9Y2E4 1556 aa36.98■■■■□ 3.51
FOCAD-211ENST00000604036 ABCA6Q8N139 1617 aa36.98■■■■□ 3.51
FOCAD-211ENST00000604036 C9orf84Q5VXU9 1444 aa36.96■■■■□ 3.51
FOCAD-211ENST00000604036 RSPH4AQ5TD94 716 aa36.96■■■■□ 3.51
FOCAD-211ENST00000604036 CCDC141Q6ZP82 1450 aa36.94■■■■□ 3.5
FOCAD-211ENST00000604036 FGD6Q6ZV73 1430 aa36.94■■■■□ 3.5
FOCAD-211ENST00000604036 SIGLEC1Q9BZZ2 1709 aa36.94■■■■□ 3.5
FOCAD-211ENST00000604036 PTPN23Q9H3S7 1636 aa36.94■■■■□ 3.5
FOCAD-211ENST00000604036 ATP7AQ04656 1500 aa36.94■■■■□ 3.5
FOCAD-211ENST00000604036 ARHGEF5Q12774 1597 aa36.93■■■■□ 3.5
FOCAD-211ENST00000604036 INO80Q9ULG1 1556 aaPredicted RBP36.92■■■■□ 3.5
FOCAD-211ENST00000604036 BCORL1Q5H9F3 1711 aa36.88■■■■□ 3.49
FOCAD-211ENST00000604036 TSPY4P0CV99 314 aa36.86■■■■□ 3.49
FOCAD-211ENST00000604036 TSPY10P0CW01 314 aa36.86■■■■□ 3.49
FOCAD-211ENST00000604036 RTEL1-TNFRSF6BF6WH68 1400 aa36.85■■■■□ 3.49
FOCAD-211ENST00000604036 REREQ9P2R6 1566 aa36.84■■■■□ 3.49
FOCAD-211ENST00000604036 TCOF1Q13428 1488 aaKnown RBP36.83■■■■□ 3.49
FOCAD-211ENST00000604036 MLECQ14165 292 aa36.83■■■■□ 3.49
FOCAD-211ENST00000604036 ADAMTSL3P82987 1691 aa36.81■■■■□ 3.48
FOCAD-211ENST00000604036 ADGBQ8N7X0 1667 aa36.77■■■■□ 3.48
FOCAD-211ENST00000604036 FAM50AQ14320 339 aaKnown RBP36.76■■■■□ 3.48
FOCAD-211ENST00000604036 A2MP01023 1474 aa36.75■■■■□ 3.47
FOCAD-211ENST00000604036 AGLP35573 1532 aa36.74■■■■□ 3.47
FOCAD-211ENST00000604036 MADDQ8WXG6 1647 aa36.73■■■■□ 3.47
FOCAD-211ENST00000604036 MAST1Q9Y2H9 1570 aa36.72■■■■□ 3.47
FOCAD-211ENST00000604036 DNMT1P26358 1616 aaKnown RBP36.71■■■■□ 3.47
FOCAD-211ENST00000604036 ABCC5O15440 1437 aa36.71■■■■□ 3.47
FOCAD-211ENST00000604036 DAPK1P53355 1430 aa36.69■■■■□ 3.46
FOCAD-211ENST00000604036 CROCC2H7BZ55 1655 aa36.69■■■■□ 3.46
FOCAD-211ENST00000604036 PLXNC1O60486 1568 aa36.67■■■■□ 3.46
FOCAD-211ENST00000604036 RIMS1Q86UR5 1692 aaKnown RBP36.65■■■■□ 3.46
FOCAD-211ENST00000604036 FER1L4A9Z1Z3 1794 aa36.65■■■■□ 3.46
FOCAD-211ENST00000604036 DHX29Q7Z478 1369 aaKnown RBP36.65■■■■□ 3.46
FOCAD-211ENST00000604036 SHANK2Q9UPX8 1470 aa36.63■■■■□ 3.45
FOCAD-211ENST00000604036 ILDR1Q86SU0 546 aaPredicted RBP36.61■■■■□ 3.45
FOCAD-211ENST00000604036 PTPRMP28827 1452 aa36.6■■■■□ 3.45
FOCAD-211ENST00000604036 CHIC2Q9UKJ5 165 aa36.59■■■■□ 3.45
FOCAD-211ENST00000604036 GGT6Q6P531 493 aa36.53■■■■□ 3.44
FOCAD-211ENST00000604036 ESF1Q9H501 851 aaKnown RBP36.53■■■■□ 3.44
FOCAD-211ENST00000604036 KIF3BO15066 747 aa36.52■■■■□ 3.44
FOCAD-211ENST00000604036 RRP7BPQ9NSQ0 103 aa36.52■■■■□ 3.44
FOCAD-211ENST00000604036 PLPPR3Q6T4P5 718 aa36.51■■■■□ 3.44
FOCAD-211ENST00000604036 KIF15Q9NS87 1388 aa36.5■■■■□ 3.43
FOCAD-211ENST00000604036 ANKRD30AQ9BXX3 1397 aa36.49■■■■□ 3.43
FOCAD-211ENST00000604036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.49■■■■□ 3.43
FOCAD-211ENST00000604036 DUOX2Q9NRD8 1548 aa36.48■■■■□ 3.43
FOCAD-211ENST00000604036 RRBP1Q9P2E9 1410 aaKnown RBP36.47■■■■□ 3.43
FOCAD-211ENST00000604036 ITGAEP38570 1179 aa36.45■■■■□ 3.43
FOCAD-211ENST00000604036 NCOA1Q15788 1441 aa36.43■■■■□ 3.42
FOCAD-211ENST00000604036 PTPRKQ15262 1439 aa36.42■■■■□ 3.42
FOCAD-211ENST00000604036 ADGRL2O95490 1459 aa36.42■■■■□ 3.42
FOCAD-211ENST00000604036 EIF2AK4Q9P2K8 1649 aaKnown RBP36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms