RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 COL17A1Q9UMD9 1497 aaPredicted RBP24.33■■□□□ 1.49
LINC00221-201ENST00000603633 KDM6BO15054 1643 aa24.33■■□□□ 1.49
LINC00221-201ENST00000603633 CFAP74Q9C0B2 1584 aa24.32■■□□□ 1.48
LINC00221-201ENST00000603633 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
LINC00221-201ENST00000603633 SCAPERQ9BY12 1400 aa24.31■■□□□ 1.48
LINC00221-201ENST00000603633 DENND4BO75064 1496 aaPredicted RBP24.31■■□□□ 1.48
LINC00221-201ENST00000603633 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
LINC00221-201ENST00000603633 ADGRL1O94910 1474 aa24.3■■□□□ 1.48
LINC00221-201ENST00000603633 RAPGEF3O95398 923 aa24.29■■□□□ 1.48
LINC00221-201ENST00000603633 MYO5CQ9NQX4 1742 aa24.28■■□□□ 1.48
LINC00221-201ENST00000603633 PREX2Q70Z35 1606 aa24.26■■□□□ 1.47
LINC00221-201ENST00000603633 PLEKHH2Q8IVE3 1493 aa24.25■■□□□ 1.47
LINC00221-201ENST00000603633 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
LINC00221-201ENST00000603633 MYOM3Q5VTT5 1437 aa24.24■■□□□ 1.47
LINC00221-201ENST00000603633 MIA2Q96PC5 1412 aa24.23■■□□□ 1.47
LINC00221-201ENST00000603633 POGZQ7Z3K3 1410 aa24.21■■□□□ 1.47
LINC00221-201ENST00000603633 RSPH4AQ5TD94 716 aa24.21■■□□□ 1.47
LINC00221-201ENST00000603633 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.46
LINC00221-201ENST00000603633 AFAP1Q8N556 730 aa24.19■■□□□ 1.46
LINC00221-201ENST00000603633 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
LINC00221-201ENST00000603633 ZNF644Q9H582 1327 aaPredicted RBP24.19■■□□□ 1.46
LINC00221-201ENST00000603633 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
LINC00221-201ENST00000603633 CDC42BPBQ9Y5S2 1711 aa24.18■■□□□ 1.46
LINC00221-201ENST00000603633 ITSN2Q9NZM3 1697 aa24.17■■□□□ 1.46
LINC00221-201ENST00000603633 ABCC1P33527 1531 aa24.16■■□□□ 1.46
LINC00221-201ENST00000603633 MAGI2Q86UL8 1455 aa24.15■■□□□ 1.46
LINC00221-201ENST00000603633 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
LINC00221-201ENST00000603633 ARHGEF12Q9NZN5 1544 aa24.13■■□□□ 1.45
LINC00221-201ENST00000603633 SAMD9LQ8IVG5 1584 aa24.13■■□□□ 1.45
LINC00221-201ENST00000603633 TRAPPC8Q9Y2L5 1435 aa24.13■■□□□ 1.45
LINC00221-201ENST00000603633 MYT1LQ9UL68 1186 aa24.11■■□□□ 1.45
LINC00221-201ENST00000603633 FGD6Q6ZV73 1430 aa24.11■■□□□ 1.45
LINC00221-201ENST00000603633 CAMSAP2Q08AD1 1489 aa24.1■■□□□ 1.45
LINC00221-201ENST00000603633 MBD5Q9P267 1494 aa24.1■■□□□ 1.45
LINC00221-201ENST00000603633 SYCP2Q9BX26 1530 aa24.09■■□□□ 1.45
LINC00221-201ENST00000603633 SPAG9O60271 1321 aaKnown RBP24.09■■□□□ 1.45
LINC00221-201ENST00000603633 ZMYM4Q5VZL5 1548 aa24.09■■□□□ 1.45
LINC00221-201ENST00000603633 FRMPD1Q5SYB0 1578 aa24.08■■□□□ 1.45
LINC00221-201ENST00000603633 TSPY4P0CV99 314 aa24.08■■□□□ 1.44
LINC00221-201ENST00000603633 TSPY10P0CW01 314 aa24.08■■□□□ 1.44
LINC00221-201ENST00000603633 MLH3Q9UHC1 1453 aa24.07■■□□□ 1.44
LINC00221-201ENST00000603633 KDM5CP41229 1560 aa24.05■■□□□ 1.44
LINC00221-201ENST00000603633 CCDC141Q6ZP82 1450 aa24.04■■□□□ 1.44
LINC00221-201ENST00000603633 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
LINC00221-201ENST00000603633 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
LINC00221-201ENST00000603633 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
LINC00221-201ENST00000603633 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
LINC00221-201ENST00000603633 YEATS2Q9ULM3 1422 aa24.01■■□□□ 1.43
LINC00221-201ENST00000603633 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
LINC00221-201ENST00000603633 ATP10AO60312 1499 aa23.98■■□□□ 1.43
LINC00221-201ENST00000603633 ARHGEF5Q12774 1597 aa23.98■■□□□ 1.43
LINC00221-201ENST00000603633 PTPN23Q9H3S7 1636 aa23.97■■□□□ 1.43
LINC00221-201ENST00000603633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.43
LINC00221-201ENST00000603633 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
LINC00221-201ENST00000603633 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
LINC00221-201ENST00000603633 C9orf84Q5VXU9 1444 aa23.95■■□□□ 1.42
LINC00221-201ENST00000603633 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
LINC00221-201ENST00000603633 ABCC5O15440 1437 aa23.93■■□□□ 1.42
LINC00221-201ENST00000603633 RRBP1Q9P2E9 1410 aaKnown RBP23.91■■□□□ 1.42
LINC00221-201ENST00000603633 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
LINC00221-201ENST00000603633 DAPK1P53355 1430 aa23.91■■□□□ 1.42
LINC00221-201ENST00000603633 SHANK2Q9UPX8 1470 aa23.88■■□□□ 1.41
LINC00221-201ENST00000603633 INO80Q9ULG1 1556 aaPredicted RBP23.85■■□□□ 1.41
LINC00221-201ENST00000603633 DIP2CQ9Y2E4 1556 aa23.85■■□□□ 1.41
LINC00221-201ENST00000603633 DHX29Q7Z478 1369 aaKnown RBP23.85■■□□□ 1.41
LINC00221-201ENST00000603633 A2MP01023 1474 aa23.85■■□□□ 1.41
LINC00221-201ENST00000603633 REREQ9P2R6 1566 aa23.83■■□□□ 1.41
LINC00221-201ENST00000603633 KIDINS220Q9ULH0 1771 aa23.83■■□□□ 1.41
LINC00221-201ENST00000603633 ANKRD30AQ9BXX3 1397 aa23.83■■□□□ 1.41
LINC00221-201ENST00000603633 MAST1Q9Y2H9 1570 aa23.83■■□□□ 1.41
LINC00221-201ENST00000603633 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.4
LINC00221-201ENST00000603633 DNMT1P26358 1616 aaKnown RBP23.82■■□□□ 1.4
LINC00221-201ENST00000603633 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
LINC00221-201ENST00000603633 AGLP35573 1532 aa23.8■■□□□ 1.4
LINC00221-201ENST00000603633 RRP7BPQ9NSQ0 103 aa23.79■■□□□ 1.4
LINC00221-201ENST00000603633 KDM4FA0A1W2PPD8 638 aa23.79■■□□□ 1.4
LINC00221-201ENST00000603633 ITGAEP38570 1179 aa23.78■■□□□ 1.4
LINC00221-201ENST00000603633 MLECQ14165 292 aa23.78■■□□□ 1.4
LINC00221-201ENST00000603633 KIF15Q9NS87 1388 aa23.78■■□□□ 1.4
LINC00221-201ENST00000603633 NCOA1Q15788 1441 aa23.77■■□□□ 1.4
LINC00221-201ENST00000603633 ROCK1Q13464 1354 aa23.76■■□□□ 1.39
LINC00221-201ENST00000603633 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
LINC00221-201ENST00000603633 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
LINC00221-201ENST00000603633 KIF3BO15066 747 aa23.74■■□□□ 1.39
LINC00221-201ENST00000603633 PTPRKQ15262 1439 aa23.74■■□□□ 1.39
LINC00221-201ENST00000603633 ESF1Q9H501 851 aaKnown RBP23.73■■□□□ 1.39
LINC00221-201ENST00000603633 PLXNC1O60486 1568 aa23.72■■□□□ 1.39
LINC00221-201ENST00000603633 DUOX2Q9NRD8 1548 aa23.72■■□□□ 1.39
LINC00221-201ENST00000603633 GGT6Q6P531 493 aa23.7■■□□□ 1.39
LINC00221-201ENST00000603633 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
LINC00221-201ENST00000603633 ADGBQ8N7X0 1667 aa23.69■■□□□ 1.38
LINC00221-201ENST00000603633 CROCC2H7BZ55 1655 aa23.68■■□□□ 1.38
LINC00221-201ENST00000603633 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.38
LINC00221-201ENST00000603633 BCORL1Q5H9F3 1711 aa23.64■■□□□ 1.38
LINC00221-201ENST00000603633 ANKRD50Q9ULJ7 1429 aa23.64■■□□□ 1.37
LINC00221-201ENST00000603633 CNTLNQ9NXG0 1405 aa23.63■■□□□ 1.37
LINC00221-201ENST00000603633 SIGLEC1Q9BZZ2 1709 aa23.61■■□□□ 1.37
LINC00221-201ENST00000603633 ADAMTSL3P82987 1691 aa23.6■■□□□ 1.37
LINC00221-201ENST00000603633 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
LINC00221-201ENST00000603633 PTPRMP28827 1452 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms