RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
UBE2E3-212ENST00000602888 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
UBE2E3-212ENST00000602888 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
UBE2E3-212ENST00000602888 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
UBE2E3-212ENST00000602888 MFSD10Q14728 455 aa11.77□□□□□ -0.53
UBE2E3-212ENST00000602888 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
UBE2E3-212ENST00000602888 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
UBE2E3-212ENST00000602888 C2orf72A6NCS6 295 aa11.74□□□□□ -0.53
UBE2E3-212ENST00000602888 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
UBE2E3-212ENST00000602888 KIF3CO14782 793 aa11.73□□□□□ -0.53
UBE2E3-212ENST00000602888 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
UBE2E3-212ENST00000602888 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
UBE2E3-212ENST00000602888 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
UBE2E3-212ENST00000602888 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
UBE2E3-212ENST00000602888 DSG2Q14126 1118 aa11.71□□□□□ -0.53
UBE2E3-212ENST00000602888 FOXK1P85037 733 aa11.7□□□□□ -0.54
UBE2E3-212ENST00000602888 E2F4Q16254 413 aa11.7□□□□□ -0.54
UBE2E3-212ENST00000602888 MAMSTRQ6ZN01 415 aa11.7□□□□□ -0.54
UBE2E3-212ENST00000602888 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
UBE2E3-212ENST00000602888 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
UBE2E3-212ENST00000602888 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
UBE2E3-212ENST00000602888 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
UBE2E3-212ENST00000602888 BCANQ96GW7 911 aa11.62□□□□□ -0.55
UBE2E3-212ENST00000602888 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
UBE2E3-212ENST00000602888 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
UBE2E3-212ENST00000602888 NBR1Q14596 966 aa11.59□□□□□ -0.55
UBE2E3-212ENST00000602888 LHX8Q68G74 356 aa11.59□□□□□ -0.55
UBE2E3-212ENST00000602888 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
UBE2E3-212ENST00000602888 ARIH1Q9Y4X5 557 aaPredicted RBP11.56□□□□□ -0.56
UBE2E3-212ENST00000602888 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
UBE2E3-212ENST00000602888 DPYSL4O14531 572 aa11.52□□□□□ -0.57
UBE2E3-212ENST00000602888 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBE2E3-212ENST00000602888 SLC34A2O95436 690 aa11.51□□□□□ -0.57
UBE2E3-212ENST00000602888 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
UBE2E3-212ENST00000602888 MAP3K9P80192 1104 aa11.49□□□□□ -0.57
UBE2E3-212ENST00000602888 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
UBE2E3-212ENST00000602888 PTCD2Q8WV60 388 aaKnown RBP11.48□□□□□ -0.57
UBE2E3-212ENST00000602888 TBC1D12O60347 775 aa11.46□□□□□ -0.57
UBE2E3-212ENST00000602888 SPDYE16A6NNV3 312 aaPredicted RBP11.45□□□□□ -0.58
UBE2E3-212ENST00000602888 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
UBE2E3-212ENST00000602888 PDIA6Q15084 440 aa11.45□□□□□ -0.58
UBE2E3-212ENST00000602888 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
UBE2E3-212ENST00000602888 SNPHO15079 494 aa11.44□□□□□ -0.58
UBE2E3-212ENST00000602888 SEMA3EO15041 775 aa11.42□□□□□ -0.58
UBE2E3-212ENST00000602888 PCDHGA4Q9Y5G9 962 aa11.42□□□□□ -0.58
UBE2E3-212ENST00000602888 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
UBE2E3-212ENST00000602888 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
UBE2E3-212ENST00000602888 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
UBE2E3-212ENST00000602888 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
UBE2E3-212ENST00000602888 EVI5O60447 810 aa11.39□□□□□ -0.59
UBE2E3-212ENST00000602888 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
UBE2E3-212ENST00000602888 ARSIQ5FYB1 569 aa11.35□□□□□ -0.59
UBE2E3-212ENST00000602888 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
UBE2E3-212ENST00000602888 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
UBE2E3-212ENST00000602888 MLLT3P42568 568 aaPredicted RBP11.33□□□□□ -0.6
UBE2E3-212ENST00000602888 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
UBE2E3-212ENST00000602888 NUDT7P0C024 238 aa11.32□□□□□ -0.6
UBE2E3-212ENST00000602888 KHSRPQ92945 711 aaKnown RBP eCLIP11.32□□□□□ -0.68e-7■■■■□ 20
UBE2E3-212ENST00000602888 PTGER2P43116 358 aa11.31□□□□□ -0.6
UBE2E3-212ENST00000602888 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
UBE2E3-212ENST00000602888 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
UBE2E3-212ENST00000602888 DDX12PQ92771 950 aa11.29□□□□□ -0.6
UBE2E3-212ENST00000602888 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
UBE2E3-212ENST00000602888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBE2E3-212ENST00000602888 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
UBE2E3-212ENST00000602888 PHF14O94880 888 aa11.24□□□□□ -0.61
UBE2E3-212ENST00000602888 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
UBE2E3-212ENST00000602888 ST18O60284 1047 aa11.23□□□□□ -0.61
UBE2E3-212ENST00000602888 OSBPP22059 807 aa11.22□□□□□ -0.61
UBE2E3-212ENST00000602888 EPAS1Q99814 870 aa11.22□□□□□ -0.61
UBE2E3-212ENST00000602888 LHX6Q9UPM6 363 aa11.22□□□□□ -0.61
UBE2E3-212ENST00000602888 FOSBP53539 338 aa11.21□□□□□ -0.61
UBE2E3-212ENST00000602888 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
UBE2E3-212ENST00000602888 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
UBE2E3-212ENST00000602888 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
UBE2E3-212ENST00000602888 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
UBE2E3-212ENST00000602888 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
UBE2E3-212ENST00000602888 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
UBE2E3-212ENST00000602888 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
UBE2E3-212ENST00000602888 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
UBE2E3-212ENST00000602888 EN1Q05925 392 aaPredicted RBP11.17□□□□□ -0.62
UBE2E3-212ENST00000602888 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
UBE2E3-212ENST00000602888 EMP3P54852 163 aa11.16□□□□□ -0.62
UBE2E3-212ENST00000602888 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
UBE2E3-212ENST00000602888 GPIHBP1Q8IV16 184 aa11.16□□□□□ -0.62
UBE2E3-212ENST00000602888 MAP3K7O43318 606 aa11.15□□□□□ -0.62
UBE2E3-212ENST00000602888 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
UBE2E3-212ENST00000602888 MARVELD3Q96A59 401 aa11.15□□□□□ -0.62
UBE2E3-212ENST00000602888 RBM33Q96EV2 1170 aaKnown RBP11.15□□□□□ -0.62
UBE2E3-212ENST00000602888 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
UBE2E3-212ENST00000602888 ERBB3P21860 1342 aa11.13□□□□□ -0.63
UBE2E3-212ENST00000602888 LCE2DQ5TA82 110 aaPredicted RBP11.11□□□□□ -0.63
UBE2E3-212ENST00000602888 ZC3H15Q8WU90 426 aaKnown RBP11.11□□□□□ -0.63
UBE2E3-212ENST00000602888 ADAM33Q9BZ11 813 aa11.11□□□□□ -0.63
UBE2E3-212ENST00000602888 VARS2Q5ST30 1063 aaKnown RBP11.1□□□□□ -0.63
UBE2E3-212ENST00000602888 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
UBE2E3-212ENST00000602888 TSR1Q2NL82 804 aaKnown RBP11.09□□□□□ -0.63
UBE2E3-212ENST00000602888 BCL2L12Q9HB09 334 aa11.08□□□□□ -0.64
UBE2E3-212ENST00000602888 CDHR5Q9HBB8 845 aa11.08□□□□□ -0.64
UBE2E3-212ENST00000602888 FAM205CA6NFA0 338 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms