RNA–Protein interactions for RNA: ENST00000602863.1

XIST-210, X inactive specific transcript, humanhuman

TSL 3 BASIC

Gene XIST, Length 775 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-210ENST00000602863 TIE1P35590 1138 aa9.18□□□□□ -0.94
XIST-210ENST00000602863 MKRN3Q13064 507 aaKnown RBP9.18□□□□□ -0.94
XIST-210ENST00000602863 GABBR2O75899 941 aa9.17□□□□□ -0.94
XIST-210ENST00000602863 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
XIST-210ENST00000602863 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
XIST-210ENST00000602863 TTLL13PA6NNM8 815 aa9.14□□□□□ -0.95
XIST-210ENST00000602863 BMP2KQ9NSY1 1161 aaPredicted RBP9.12□□□□□ -0.95
XIST-210ENST00000602863 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
XIST-210ENST00000602863 PDS5BQ9NTI5 1447 aa9.11□□□□□ -0.95
XIST-210ENST00000602863 E2F4Q16254 413 aa9.1□□□□□ -0.95
XIST-210ENST00000602863 LAMC3Q9Y6N6 1575 aa9.1□□□□□ -0.95
XIST-210ENST00000602863 NCKAP5LQ9HCH0 1330 aa9.09□□□□□ -0.95
XIST-210ENST00000602863 GALR2O43603 387 aaPredicted RBP9.09□□□□□ -0.95
XIST-210ENST00000602863 PDE4AP27815 886 aa9.09□□□□□ -0.95
XIST-210ENST00000602863 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
XIST-210ENST00000602863 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
XIST-210ENST00000602863 LARP6Q9BRS8 491 aaKnown RBP9.08□□□□□ -0.96
XIST-210ENST00000602863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.08□□□□□ -0.96
XIST-210ENST00000602863 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
XIST-210ENST00000602863 CRISPLD2Q9H0B8 497 aa9.07□□□□□ -0.96
XIST-210ENST00000602863 MFSD10Q14728 455 aa9.06□□□□□ -0.96
XIST-210ENST00000602863 FANCD2Q9BXW9 1451 aa9.06□□□□□ -0.96
XIST-210ENST00000602863 DDX27Q96GQ7 796 aaKnown RBP9.05□□□□□ -0.96
XIST-210ENST00000602863 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
XIST-210ENST00000602863 NESP48681 1621 aa9.04□□□□□ -0.96
XIST-210ENST00000602863 ABCC8Q09428 1581 aa9.03□□□□□ -0.96
XIST-210ENST00000602863 DCBLD2Q96PD2 775 aa9.01□□□□□ -0.97
XIST-210ENST00000602863 EEA1Q15075 1411 aa9□□□□□ -0.97
XIST-210ENST00000602863 LHX8Q68G74 356 aa9□□□□□ -0.97
XIST-210ENST00000602863 LMOD2Q6P5Q4 547 aa9□□□□□ -0.97
XIST-210ENST00000602863 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9□□□□□ -0.97
XIST-210ENST00000602863 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
XIST-210ENST00000602863 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
XIST-210ENST00000602863 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
XIST-210ENST00000602863 CUX1P39880 1505 aa8.99□□□□□ -0.97
XIST-210ENST00000602863 ATMINO43313 823 aaPredicted RBP8.98□□□□□ -0.97
XIST-210ENST00000602863 IER5LQ5T953 404 aa8.98□□□□□ -0.97
XIST-210ENST00000602863 ASTLQ6HA08 431 aaPredicted RBP8.98□□□□□ -0.97
XIST-210ENST00000602863 ARIH1Q9Y4X5 557 aaPredicted RBP8.98□□□□□ -0.97
XIST-210ENST00000602863 CAMK2BQ13554 666 aa8.97□□□□□ -0.97
XIST-210ENST00000602863 MICALL2Q8IY33 904 aa8.97□□□□□ -0.97
XIST-210ENST00000602863 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
XIST-210ENST00000602863 GPHNQ9NQX3 736 aaPredicted RBP8.97□□□□□ -0.97
XIST-210ENST00000602863 SYNJ1O43426 1573 aa8.97□□□□□ -0.97
XIST-210ENST00000602863 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
XIST-210ENST00000602863 IRX5P78411 483 aaPredicted RBP8.96□□□□□ -0.98
XIST-210ENST00000602863 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
XIST-210ENST00000602863 OCEL1Q9H607 264 aa8.96□□□□□ -0.98
XIST-210ENST00000602863 PRDM2Q13029 1718 aa8.95□□□□□ -0.98
XIST-210ENST00000602863 SEMA3EO15041 775 aa8.95□□□□□ -0.98
XIST-210ENST00000602863 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
XIST-210ENST00000602863 TOPBP1Q92547 1522 aa8.95□□□□□ -0.98
XIST-210ENST00000602863 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
XIST-210ENST00000602863 POTEIP0CG38 1075 aa8.94□□□□□ -0.98
XIST-210ENST00000602863 G3V3G9 751 aa8.93□□□□□ -0.98
XIST-210ENST00000602863 SOGA1O94964 1423 aa8.93□□□□□ -0.98
XIST-210ENST00000602863 DNMBPQ6XZF7 1577 aa8.93□□□□□ -0.98
XIST-210ENST00000602863 URB2Q14146 1524 aaKnown RBP8.92□□□□□ -0.98
XIST-210ENST00000602863 MRC2Q9UBG0 1479 aa8.92□□□□□ -0.98
XIST-210ENST00000602863 PLCG2P16885 1265 aa8.92□□□□□ -0.98
XIST-210ENST00000602863 TMC2Q8TDI7 906 aa8.92□□□□□ -0.98
XIST-210ENST00000602863 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
XIST-210ENST00000602863 KIF27Q86VH2 1401 aa8.91□□□□□ -0.98
XIST-210ENST00000602863 SMYD5Q6GMV2 418 aa8.91□□□□□ -0.98
XIST-210ENST00000602863 TMEM121BQ9BXQ6 578 aaPredicted RBP8.91□□□□□ -0.98
XIST-210ENST00000602863 ERCC6Q03468 1493 aa8.9□□□□□ -0.98
XIST-210ENST00000602863 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
XIST-210ENST00000602863 DSG2Q14126 1118 aa8.9□□□□□ -0.98
XIST-210ENST00000602863 FAM9AQ8IZU1 332 aaPredicted RBP8.9□□□□□ -0.98
XIST-210ENST00000602863 POLA1P09884 1462 aaPredicted RBP8.89□□□□□ -0.99
XIST-210ENST00000602863 LOC105371045A0A1W2PR82 267 aa8.88□□□□□ -0.99
XIST-210ENST00000602863 FOXK1P85037 733 aa8.88□□□□□ -0.99
XIST-210ENST00000602863 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
XIST-210ENST00000602863 ABCA10Q8WWZ4 1543 aa8.88□□□□□ -0.99
XIST-210ENST00000602863 IGF1RP08069 1367 aa8.87□□□□□ -0.99
XIST-210ENST00000602863 WDR62O43379 1518 aa8.86□□□□□ -0.99
XIST-210ENST00000602863 RUSC2Q8N2Y8 1516 aa8.86□□□□□ -0.99
XIST-210ENST00000602863 ZC3H15Q8WU90 426 aaKnown RBP8.86□□□□□ -0.99
XIST-210ENST00000602863 CUX2O14529 1486 aa8.85□□□□□ -0.99
XIST-210ENST00000602863 SEC24BO95487 1268 aa8.85□□□□□ -0.99
XIST-210ENST00000602863 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
XIST-210ENST00000602863 C2orf72A6NCS6 295 aa8.84□□□□□ -0.99
XIST-210ENST00000602863 DPYSL4O14531 572 aa8.84□□□□□ -0.99
XIST-210ENST00000602863 KIF3CO14782 793 aa8.84□□□□□ -0.99
XIST-210ENST00000602863 IFT140Q96RY7 1462 aa8.83□□□□□ -1
XIST-210ENST00000602863 PRXQ9BXM0 1461 aa8.83□□□□□ -1
XIST-210ENST00000602863 RAD54L2Q9Y4B4 1467 aa8.83□□□□□ -1
XIST-210ENST00000602863 SPDYE16A6NNV3 312 aaPredicted RBP8.83□□□□□ -1
XIST-210ENST00000602863 PDIA6Q15084 440 aa8.83□□□□□ -1
XIST-210ENST00000602863 PLPP6Q8IY26 295 aa8.83□□□□□ -1
XIST-210ENST00000602863 SLC39A7Q92504 469 aa8.83□□□□□ -1
XIST-210ENST00000602863 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
XIST-210ENST00000602863 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
XIST-210ENST00000602863 CARMIL1Q5VZK9 1371 aa8.81□□□□□ -1
XIST-210ENST00000602863 TNIKQ9UKE5 1360 aa8.81□□□□□ -1
XIST-210ENST00000602863 C7P10643 843 aa8.8□□□□□ -1
XIST-210ENST00000602863 MLLT3P42568 568 aaPredicted RBP8.8□□□□□ -1
XIST-210ENST00000602863 COLQQ9Y215 455 aaPredicted RBP8.8□□□□□ -1
XIST-210ENST00000602863 TDRD9Q8NDG6 1382 aaKnown RBP8.8□□□□□ -1
XIST-210ENST00000602863 GOLGA3Q08378 1498 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms