RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 LRRC9Q6ZRR7 1453 aa22.13■■□□□ 1.13
XRCC1-207ENST00000598165 AKNAQ7Z591 1439 aa22.12■■□□□ 1.13
XRCC1-207ENST00000598165 CFAP74Q9C0B2 1584 aa22.12■■□□□ 1.13
XRCC1-207ENST00000598165 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
XRCC1-207ENST00000598165 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
XRCC1-207ENST00000598165 CCNB3Q8WWL7 1395 aa22.1■■□□□ 1.13
XRCC1-207ENST00000598165 GPATCH8Q9UKJ3 1502 aaKnown RBP22.07■■□□□ 1.12
XRCC1-207ENST00000598165 PREX2Q70Z35 1606 aa22.07■■□□□ 1.12
XRCC1-207ENST00000598165 NCOA2Q15596 1464 aa22.07■■□□□ 1.12
XRCC1-207ENST00000598165 SUPT6HQ7KZ85 1726 aaKnown RBP22.06■■□□□ 1.12
XRCC1-207ENST00000598165 CDC42BPBQ9Y5S2 1711 aa22.05■■□□□ 1.12
XRCC1-207ENST00000598165 CDC42BPAQ5VT25 1732 aa22.04■■□□□ 1.12
XRCC1-207ENST00000598165 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
XRCC1-207ENST00000598165 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
XRCC1-207ENST00000598165 DENND4BO75064 1496 aaPredicted RBP22.03■■□□□ 1.12
XRCC1-207ENST00000598165 SCAPERQ9BY12 1400 aa22.03■■□□□ 1.12
XRCC1-207ENST00000598165 ZNF777Q9ULD5 760 aaPredicted RBP22.02■■□□□ 1.12
XRCC1-207ENST00000598165 ITSN2Q9NZM3 1697 aa21.98■■□□□ 1.11
XRCC1-207ENST00000598165 POGZQ7Z3K3 1410 aa21.96■■□□□ 1.11
XRCC1-207ENST00000598165 FRMPD1Q5SYB0 1578 aa21.95■■□□□ 1.1
XRCC1-207ENST00000598165 ABCC1P33527 1531 aa21.94■■□□□ 1.1
XRCC1-207ENST00000598165 RICTORQ6R327 1708 aa21.93■■□□□ 1.1
XRCC1-207ENST00000598165 SAMD9LQ8IVG5 1584 aa21.93■■□□□ 1.1
XRCC1-207ENST00000598165 PLEKHH2Q8IVE3 1493 aa21.92■■□□□ 1.1
XRCC1-207ENST00000598165 ZNF518AQ6AHZ1 1483 aa21.91■■□□□ 1.1
XRCC1-207ENST00000598165 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
XRCC1-207ENST00000598165 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
XRCC1-207ENST00000598165 KIAA1107Q9UPP5 1409 aa21.9■■□□□ 1.1
XRCC1-207ENST00000598165 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
XRCC1-207ENST00000598165 AFAP1Q8N556 730 aa21.9■■□□□ 1.1
XRCC1-207ENST00000598165 HNRNPMP52272 730 aaKnown RBP eCLIP21.89■■□□□ 1.09
XRCC1-207ENST00000598165 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.09
XRCC1-207ENST00000598165 ZMYM4Q5VZL5 1548 aa21.88■■□□□ 1.09
XRCC1-207ENST00000598165 SYCP2Q9BX26 1530 aa21.88■■□□□ 1.09
XRCC1-207ENST00000598165 MIA2Q96PC5 1412 aa21.87■■□□□ 1.09
XRCC1-207ENST00000598165 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
XRCC1-207ENST00000598165 CAMSAP2Q08AD1 1489 aa21.85■■□□□ 1.09
XRCC1-207ENST00000598165 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
XRCC1-207ENST00000598165 KDM5CP41229 1560 aa21.84■■□□□ 1.09
XRCC1-207ENST00000598165 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
XRCC1-207ENST00000598165 PTPRMP28827 1452 aa21.83■■□□□ 1.09
XRCC1-207ENST00000598165 ADAMTSL3P82987 1691 aa21.82■■□□□ 1.08
XRCC1-207ENST00000598165 ZFYVE16Q7Z3T8 1539 aa21.82■■□□□ 1.08
XRCC1-207ENST00000598165 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
XRCC1-207ENST00000598165 YEATS2Q9ULM3 1422 aa21.8■■□□□ 1.08
XRCC1-207ENST00000598165 ARHGEF40Q8TER5 1519 aa21.8■■□□□ 1.08
XRCC1-207ENST00000598165 MLH3Q9UHC1 1453 aa21.8■■□□□ 1.08
XRCC1-207ENST00000598165 RSPH4AQ5TD94 716 aa21.8■■□□□ 1.08
XRCC1-207ENST00000598165 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
XRCC1-207ENST00000598165 FGD6Q6ZV73 1430 aa21.79■■□□□ 1.08
XRCC1-207ENST00000598165 CCDC141Q6ZP82 1450 aa21.76■■□□□ 1.07
XRCC1-207ENST00000598165 MADDQ8WXG6 1647 aa21.75■■□□□ 1.07
XRCC1-207ENST00000598165 BCORL1Q5H9F3 1711 aa21.75■■□□□ 1.07
XRCC1-207ENST00000598165 PTPN23Q9H3S7 1636 aa21.74■■□□□ 1.07
XRCC1-207ENST00000598165 ATP10AO60312 1499 aa21.74■■□□□ 1.07
XRCC1-207ENST00000598165 ARID4BQ4LE39 1312 aaPredicted RBP21.74■■□□□ 1.07
XRCC1-207ENST00000598165 ARHGEF5Q12774 1597 aa21.74■■□□□ 1.07
XRCC1-207ENST00000598165 TCOF1Q13428 1488 aaKnown RBP21.72■■□□□ 1.07
XRCC1-207ENST00000598165 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
XRCC1-207ENST00000598165 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
XRCC1-207ENST00000598165 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
XRCC1-207ENST00000598165 KIDINS220Q9ULH0 1771 aa21.71■■□□□ 1.07
XRCC1-207ENST00000598165 ATP7AQ04656 1500 aa21.7■■□□□ 1.07
XRCC1-207ENST00000598165 DIP2CQ9Y2E4 1556 aa21.7■■□□□ 1.06
XRCC1-207ENST00000598165 FAM50AQ14320 339 aaKnown RBP21.69■■□□□ 1.06
XRCC1-207ENST00000598165 RTEL1-TNFRSF6BF6WH68 1400 aa21.69■■□□□ 1.06
XRCC1-207ENST00000598165 INO80Q9ULG1 1556 aaPredicted RBP21.69■■□□□ 1.06
XRCC1-207ENST00000598165 ABCA6Q8N139 1617 aa21.69■■□□□ 1.06
XRCC1-207ENST00000598165 LMTK3Q96Q04 1460 aa21.68■■□□□ 1.06
XRCC1-207ENST00000598165 FBXO41Q8TF61 875 aa21.66■■□□□ 1.06
XRCC1-207ENST00000598165 REREQ9P2R6 1566 aa21.64■■□□□ 1.05
XRCC1-207ENST00000598165 ABCC5O15440 1437 aa21.63■■□□□ 1.05
XRCC1-207ENST00000598165 RIMS1Q86UR5 1692 aaKnown RBP21.63■■□□□ 1.05
XRCC1-207ENST00000598165 DAPK1P53355 1430 aa21.63■■□□□ 1.05
XRCC1-207ENST00000598165 DNMT1P26358 1616 aaKnown RBP21.61■■□□□ 1.05
XRCC1-207ENST00000598165 MAST1Q9Y2H9 1570 aa21.61■■□□□ 1.05
XRCC1-207ENST00000598165 SIGLEC1Q9BZZ2 1709 aa21.6■■□□□ 1.05
XRCC1-207ENST00000598165 A2MP01023 1474 aa21.6■■□□□ 1.05
XRCC1-207ENST00000598165 MLECQ14165 292 aa21.6■■□□□ 1.05
XRCC1-207ENST00000598165 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
XRCC1-207ENST00000598165 AGLP35573 1532 aa21.58■■□□□ 1.04
XRCC1-207ENST00000598165 ADGBQ8N7X0 1667 aa21.57■■□□□ 1.04
XRCC1-207ENST00000598165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.04
XRCC1-207ENST00000598165 PLPPR3Q6T4P5 718 aa21.56■■□□□ 1.04
XRCC1-207ENST00000598165 CHIC2Q9UKJ5 165 aa21.56■■□□□ 1.04
XRCC1-207ENST00000598165 DHX29Q7Z478 1369 aaKnown RBP21.56■■□□□ 1.04
XRCC1-207ENST00000598165 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
XRCC1-207ENST00000598165 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
XRCC1-207ENST00000598165 PLXNC1O60486 1568 aa21.54■■□□□ 1.04
XRCC1-207ENST00000598165 HSPA2P54652 639 aa21.54■■□□□ 1.04
XRCC1-207ENST00000598165 ANKRD30AQ9BXX3 1397 aa21.51■■□□□ 1.03
XRCC1-207ENST00000598165 ITGAEP38570 1179 aa21.51■■□□□ 1.03
XRCC1-207ENST00000598165 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
XRCC1-207ENST00000598165 KIF15Q9NS87 1388 aa21.5■■□□□ 1.03
XRCC1-207ENST00000598165 KIF3BO15066 747 aa21.48■■□□□ 1.03
XRCC1-207ENST00000598165 GGT6Q6P531 493 aa21.48■■□□□ 1.03
XRCC1-207ENST00000598165 PTPRKQ15262 1439 aa21.47■■□□□ 1.03
XRCC1-207ENST00000598165 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
XRCC1-207ENST00000598165 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
XRCC1-207ENST00000598165 DUOX2Q9NRD8 1548 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms