RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 PHLDB1Q86UU1 1377 aa34.98■■■■□ 3.19
SNRNP70-204ENST00000595231 ARHGAP5Q13017 1502 aa34.97■■■■□ 3.19
SNRNP70-204ENST00000595231 EFCAB2Q5VUJ9 269 aa34.96■■■■□ 3.19
SNRNP70-204ENST00000595231 NEO1Q92859 1461 aa34.95■■■■□ 3.19
SNRNP70-204ENST00000595231 CFDP1Q9UEE9 299 aaPredicted RBP34.95■■■■□ 3.18
SNRNP70-204ENST00000595231 ITSN2Q9NZM3 1697 aa34.94■■■■□ 3.18
SNRNP70-204ENST00000595231 MYOM3Q5VTT5 1437 aa34.93■■■■□ 3.18
SNRNP70-204ENST00000595231 AKNAQ7Z591 1439 aa34.9■■■■□ 3.18
SNRNP70-204ENST00000595231 CFAP74Q9C0B2 1584 aa34.9■■■■□ 3.18
SNRNP70-204ENST00000595231 ZNF777Q9ULD5 760 aaPredicted RBP34.86■■■■□ 3.17
SNRNP70-204ENST00000595231 COL17A1Q9UMD9 1497 aaPredicted RBP34.84■■■■□ 3.17
SNRNP70-204ENST00000595231 MIA2Q96PC5 1412 aa34.84■■■■□ 3.17
SNRNP70-204ENST00000595231 ZNF644Q9H582 1327 aaPredicted RBP34.84■■■■□ 3.17
SNRNP70-204ENST00000595231 SAMD9LQ8IVG5 1584 aa34.83■■■■□ 3.17
SNRNP70-204ENST00000595231 ADGRL1O94910 1474 aa34.81■■■■□ 3.16
SNRNP70-204ENST00000595231 FGD6Q6ZV73 1430 aa34.79■■■■□ 3.16
SNRNP70-204ENST00000595231 SCAPERQ9BY12 1400 aa34.78■■■■□ 3.16
SNRNP70-204ENST00000595231 ABCC1P33527 1531 aa34.77■■■■□ 3.16
SNRNP70-204ENST00000595231 ARHGEF12Q9NZN5 1544 aa34.76■■■■□ 3.16
SNRNP70-204ENST00000595231 KDM6BO15054 1643 aa34.75■■■■□ 3.15
SNRNP70-204ENST00000595231 CAMSAP2Q08AD1 1489 aa34.74■■■■□ 3.15
SNRNP70-204ENST00000595231 KIAA1107Q9UPP5 1409 aa34.73■■■■□ 3.15
SNRNP70-204ENST00000595231 PLEKHH2Q8IVE3 1493 aa34.72■■■■□ 3.15
SNRNP70-204ENST00000595231 RAPGEF3O95398 923 aa34.71■■■■□ 3.15
SNRNP70-204ENST00000595231 HNRNPMP52272 730 aaKnown RBP eCLIP34.71■■■■□ 3.153e-8■■□□□ 13.9
SNRNP70-204ENST00000595231 DENND4BO75064 1496 aaPredicted RBP34.71■■■■□ 3.15
SNRNP70-204ENST00000595231 PTPN23Q9H3S7 1636 aa34.71■■■■□ 3.15
SNRNP70-204ENST00000595231 SYCP2Q9BX26 1530 aa34.7■■■■□ 3.14
SNRNP70-204ENST00000595231 TCOF1Q13428 1488 aaKnown RBP34.68■■■■□ 3.14
SNRNP70-204ENST00000595231 MBD5Q9P267 1494 aa34.68■■■■□ 3.14
SNRNP70-204ENST00000595231 TRAPPC8Q9Y2L5 1435 aa34.67■■■■□ 3.14
SNRNP70-204ENST00000595231 RICTORQ6R327 1708 aa34.66■■■■□ 3.14
SNRNP70-204ENST00000595231 POGZQ7Z3K3 1410 aa34.66■■■■□ 3.14
SNRNP70-204ENST00000595231 FRMPD1Q5SYB0 1578 aa34.66■■■■□ 3.14
SNRNP70-204ENST00000595231 AFAP1Q8N556 730 aa34.64■■■■□ 3.14
SNRNP70-204ENST00000595231 ZNF518AQ6AHZ1 1483 aa34.61■■■■□ 3.13
SNRNP70-204ENST00000595231 RRBP1Q9P2E9 1410 aaKnown RBP34.61■■■■□ 3.13
SNRNP70-204ENST00000595231 FAM50AQ14320 339 aaKnown RBP34.57■■■■□ 3.13
SNRNP70-204ENST00000595231 KDM5CP41229 1560 aa34.56■■■■□ 3.12
SNRNP70-204ENST00000595231 ARHGEF5Q12774 1597 aa34.56■■■■□ 3.12
SNRNP70-204ENST00000595231 RSPH4AQ5TD94 716 aa34.56■■■■□ 3.12
SNRNP70-204ENST00000595231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.53■■■■□ 3.126e-8■□□□□ 11.1
SNRNP70-204ENST00000595231 ZMYM4Q5VZL5 1548 aa34.53■■■■□ 3.12
SNRNP70-204ENST00000595231 CCDC141Q6ZP82 1450 aa34.52■■■■□ 3.12
SNRNP70-204ENST00000595231 ABCC5O15440 1437 aa34.48■■■■□ 3.11
SNRNP70-204ENST00000595231 DNMT1P26358 1616 aaKnown RBP34.48■■■■□ 3.11
SNRNP70-204ENST00000595231 MLH3Q9UHC1 1453 aa34.47■■■■□ 3.11
SNRNP70-204ENST00000595231 DAPK1P53355 1430 aa34.46■■■■□ 3.11
SNRNP70-204ENST00000595231 SPAG9O60271 1321 aaKnown RBP34.45■■■■□ 3.11
SNRNP70-204ENST00000595231 MAGI2Q86UL8 1455 aa34.45■■■■□ 3.1
SNRNP70-204ENST00000595231 HECW2Q9P2P5 1572 aa34.43■■■■□ 3.1
SNRNP70-204ENST00000595231 TSPY4P0CV99 314 aa34.42■■■■□ 3.1
SNRNP70-204ENST00000595231 TSPY10P0CW01 314 aa34.42■■■■□ 3.1
SNRNP70-204ENST00000595231 KIDINS220Q9ULH0 1771 aa34.41■■■■□ 3.1
SNRNP70-204ENST00000595231 YEATS2Q9ULM3 1422 aa34.41■■■■□ 3.1
SNRNP70-204ENST00000595231 INO80Q9ULG1 1556 aaPredicted RBP34.4■■■■□ 3.1
SNRNP70-204ENST00000595231 CROCC2H7BZ55 1655 aa34.39■■■■□ 3.1
SNRNP70-204ENST00000595231 RTEL1-TNFRSF6BF6WH68 1400 aa34.39■■■■□ 3.1
SNRNP70-204ENST00000595231 ATP7AQ04656 1500 aa34.38■■■■□ 3.09
SNRNP70-204ENST00000595231 ZFYVE16Q7Z3T8 1539 aa34.38■■■■□ 3.09
SNRNP70-204ENST00000595231 PTPRKQ15262 1439 aa34.37■■■■□ 3.09
SNRNP70-204ENST00000595231 MAST1Q9Y2H9 1570 aa34.37■■■■□ 3.09
SNRNP70-204ENST00000595231 MYT1LQ9UL68 1186 aa34.36■■■■□ 3.09
SNRNP70-204ENST00000595231 C9orf84Q5VXU9 1444 aa34.36■■■■□ 3.09
SNRNP70-204ENST00000595231 SHANK2Q9UPX8 1470 aa34.36■■■■□ 3.09
SNRNP70-204ENST00000595231 ITGAEP38570 1179 aa34.32■■■■□ 3.08
SNRNP70-204ENST00000595231 ARHGEF40Q8TER5 1519 aa34.32■■■■□ 3.08
SNRNP70-204ENST00000595231 ABCA6Q8N139 1617 aa34.31■■■■□ 3.08
SNRNP70-204ENST00000595231 CHIC2Q9UKJ5 165 aa34.31■■■■□ 3.08
SNRNP70-204ENST00000595231 DIP2CQ9Y2E4 1556 aa34.3■■■■□ 3.08
SNRNP70-204ENST00000595231 ATP10AO60312 1499 aa34.27■■■■□ 3.08
SNRNP70-204ENST00000595231 NCOA1Q15788 1441 aa34.23■■■■□ 3.07
SNRNP70-204ENST00000595231 ADGRL2O95490 1459 aa34.23■■■■□ 3.07
SNRNP70-204ENST00000595231 PLXNC1O60486 1568 aa34.22■■■■□ 3.07
SNRNP70-204ENST00000595231 ADGBQ8N7X0 1667 aa34.2■■■■□ 3.07
SNRNP70-204ENST00000595231 ANKRD30AQ9BXX3 1397 aa34.2■■■■□ 3.07
SNRNP70-204ENST00000595231 RRP7BPQ9NSQ0 103 aa34.19■■■■□ 3.06
SNRNP70-204ENST00000595231 ROCK1Q13464 1354 aa34.18■■■■□ 3.06
SNRNP70-204ENST00000595231 REREQ9P2R6 1566 aa34.17■■■■□ 3.06
SNRNP70-204ENST00000595231 SIGLEC1Q9BZZ2 1709 aa34.17■■■■□ 3.06
SNRNP70-204ENST00000595231 A2MP01023 1474 aa34.17■■■■□ 3.06
SNRNP70-204ENST00000595231 DHX29Q7Z478 1369 aaKnown RBP34.15■■■■□ 3.06
SNRNP70-204ENST00000595231 KIF15Q9NS87 1388 aa34.15■■■■□ 3.06
SNRNP70-204ENST00000595231 DUOX2Q9NRD8 1548 aa34.1■■■■□ 3.05
SNRNP70-204ENST00000595231 AGLP35573 1532 aa34.07■■■■□ 3.04
SNRNP70-204ENST00000595231 TRIM26Q12899 539 aaPredicted RBP34.05■■■■□ 3.04
SNRNP70-204ENST00000595231 ARID4BQ4LE39 1312 aaPredicted RBP34.04■■■■□ 3.04
SNRNP70-204ENST00000595231 ERBINQ96RT1 1412 aa34.01■■■■□ 3.03
SNRNP70-204ENST00000595231 NAIPQ13075 1403 aa34■■■■□ 3.03
SNRNP70-204ENST00000595231 ANKRD50Q9ULJ7 1429 aa33.99■■■■□ 3.03
SNRNP70-204ENST00000595231 HFM1A2PYH4 1435 aa33.99■■■■□ 3.03
SNRNP70-204ENST00000595231 KIF3BO15066 747 aa33.97■■■■□ 3.03
SNRNP70-204ENST00000595231 BCORL1Q5H9F3 1711 aa33.97■■■■□ 3.03
SNRNP70-204ENST00000595231 EIF2AK4Q9P2K8 1649 aaKnown RBP33.96■■■■□ 3.03
SNRNP70-204ENST00000595231 GCC2Q8IWJ2 1684 aa33.93■■■■□ 3.02
SNRNP70-204ENST00000595231 MLECQ14165 292 aa33.92■■■■□ 3.02
SNRNP70-204ENST00000595231 GGT6Q6P531 493 aa33.89■■■■□ 3.02
SNRNP70-204ENST00000595231 RNF17Q9BXT8 1623 aaKnown RBP33.86■■■■□ 3.01
SNRNP70-204ENST00000595231 MROH1Q8NDA8 1641 aa33.83■■■■□ 3.01
SNRNP70-204ENST00000595231 DEPDC5O75140 1603 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms