RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
BRCA1-227ENST00000591849 ADAMTSL3P82987 1691 aa15.83■□□□□ 0.13
BRCA1-227ENST00000591849 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.12
BRCA1-227ENST00000591849 SCAPERQ9BY12 1400 aa15.83■□□□□ 0.12
BRCA1-227ENST00000591849 ARHGAP5Q13017 1502 aa15.83■□□□□ 0.12
BRCA1-227ENST00000591849 RICTORQ6R327 1708 aa15.82■□□□□ 0.12
BRCA1-227ENST00000591849 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
BRCA1-227ENST00000591849 ARID4BQ4LE39 1312 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-227ENST00000591849 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
BRCA1-227ENST00000591849 BCORL1Q5H9F3 1711 aa15.8■□□□□ 0.12
BRCA1-227ENST00000591849 ARHGEF40Q8TER5 1519 aa15.8■□□□□ 0.12
BRCA1-227ENST00000591849 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.11
BRCA1-227ENST00000591849 AFAP1Q8N556 730 aa15.76■□□□□ 0.11
BRCA1-227ENST00000591849 ZMYM4Q5VZL5 1548 aa15.75■□□□□ 0.11
BRCA1-227ENST00000591849 MADDQ8WXG6 1647 aa15.75■□□□□ 0.11
BRCA1-227ENST00000591849 EHBP1L1Q8N3D4 1523 aa15.74■□□□□ 0.11
BRCA1-227ENST00000591849 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
BRCA1-227ENST00000591849 PTPRMP28827 1452 aa15.73■□□□□ 0.11
BRCA1-227ENST00000591849 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.11
BRCA1-227ENST00000591849 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
BRCA1-227ENST00000591849 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-227ENST00000591849 ILDR1Q86SU0 546 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-227ENST00000591849 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
BRCA1-227ENST00000591849 ZNF518AQ6AHZ1 1483 aa15.7■□□□□ 0.1
BRCA1-227ENST00000591849 RIMS1Q86UR5 1692 aaKnown RBP15.7■□□□□ 0.1
BRCA1-227ENST00000591849 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
BRCA1-227ENST00000591849 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
BRCA1-227ENST00000591849 MAGI2Q86UL8 1455 aa15.69■□□□□ 0.1
BRCA1-227ENST00000591849 NCOA2Q15596 1464 aa15.68■□□□□ 0.1
BRCA1-227ENST00000591849 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
BRCA1-227ENST00000591849 MLECQ14165 292 aa15.68■□□□□ 0.1
BRCA1-227ENST00000591849 YEATS2Q9ULM3 1422 aa15.68■□□□□ 0.1
BRCA1-227ENST00000591849 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
BRCA1-227ENST00000591849 ZNF644Q9H582 1327 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-227ENST00000591849 CDC42BPBQ9Y5S2 1711 aa15.67■□□□□ 0.1
BRCA1-227ENST00000591849 MAP3K1Q13233 1512 aa15.67■□□□□ 0.1
BRCA1-227ENST00000591849 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
BRCA1-227ENST00000591849 TRAPPC8Q9Y2L5 1435 aa15.67■□□□□ 0.1
BRCA1-227ENST00000591849 FER1L4A9Z1Z3 1794 aa15.65■□□□□ 0.1
BRCA1-227ENST00000591849 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
BRCA1-227ENST00000591849 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
BRCA1-227ENST00000591849 SIGLEC1Q9BZZ2 1709 aa15.65■□□□□ 0.1
BRCA1-227ENST00000591849 ATP10AO60312 1499 aa15.65■□□□□ 0.1
BRCA1-227ENST00000591849 KIAA1107Q9UPP5 1409 aa15.64■□□□□ 0.09
BRCA1-227ENST00000591849 ABCC1P33527 1531 aa15.63■□□□□ 0.09
BRCA1-227ENST00000591849 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
BRCA1-227ENST00000591849 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
BRCA1-227ENST00000591849 LMTK3Q96Q04 1460 aa15.62■□□□□ 0.09
BRCA1-227ENST00000591849 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
BRCA1-227ENST00000591849 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
BRCA1-227ENST00000591849 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
BRCA1-227ENST00000591849 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
BRCA1-227ENST00000591849 SAMD9LQ8IVG5 1584 aa15.61■□□□□ 0.09
BRCA1-227ENST00000591849 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
BRCA1-227ENST00000591849 MLH3Q9UHC1 1453 aa15.6■□□□□ 0.09
BRCA1-227ENST00000591849 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
BRCA1-227ENST00000591849 ITSN2Q9NZM3 1697 aa15.59■□□□□ 0.09
BRCA1-227ENST00000591849 KDM5CP41229 1560 aa15.58■□□□□ 0.08
BRCA1-227ENST00000591849 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
BRCA1-227ENST00000591849 CAMSAP2Q08AD1 1489 aa15.56■□□□□ 0.08
BRCA1-227ENST00000591849 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
BRCA1-227ENST00000591849 PPARGC1BQ86YN6 1023 aaKnown RBP15.54■□□□□ 0.08
BRCA1-227ENST00000591849 PREX1Q8TCU6 1659 aa15.54■□□□□ 0.08
BRCA1-227ENST00000591849 MBD5Q9P267 1494 aa15.53■□□□□ 0.08
BRCA1-227ENST00000591849 FAM50AQ14320 339 aaKnown RBP15.52■□□□□ 0.08
BRCA1-227ENST00000591849 REREQ9P2R6 1566 aa15.52■□□□□ 0.07
BRCA1-227ENST00000591849 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.07
BRCA1-227ENST00000591849 DIP2CQ9Y2E4 1556 aa15.51■□□□□ 0.07
BRCA1-227ENST00000591849 ATP7AQ04656 1500 aa15.5■□□□□ 0.07
BRCA1-227ENST00000591849 GGT6Q6P531 493 aa15.5■□□□□ 0.07
BRCA1-227ENST00000591849 RTEL1-TNFRSF6BF6WH68 1400 aa15.5■□□□□ 0.07
BRCA1-227ENST00000591849 FBXO41Q8TF61 875 aa15.49■□□□□ 0.07
BRCA1-227ENST00000591849 SETD1BQ9UPS6 1966 aaKnown RBP15.49■□□□□ 0.07
BRCA1-227ENST00000591849 A2MP01023 1474 aa15.48■□□□□ 0.07
BRCA1-227ENST00000591849 ABCA6Q8N139 1617 aa15.48■□□□□ 0.07
BRCA1-227ENST00000591849 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
BRCA1-227ENST00000591849 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
BRCA1-227ENST00000591849 KIF3BO15066 747 aa15.46■□□□□ 0.07
BRCA1-227ENST00000591849 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
BRCA1-227ENST00000591849 AGLP35573 1532 aa15.45■□□□□ 0.06
BRCA1-227ENST00000591849 CEBPAP49715 358 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-227ENST00000591849 CHIC2Q9UKJ5 165 aa15.44■□□□□ 0.06
BRCA1-227ENST00000591849 ARHGEF5Q12774 1597 aa15.44■□□□□ 0.06
BRCA1-227ENST00000591849 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-227ENST00000591849 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
BRCA1-227ENST00000591849 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
BRCA1-227ENST00000591849 C3P01024 1663 aa15.41■□□□□ 0.06
BRCA1-227ENST00000591849 PTPN23Q9H3S7 1636 aa15.41■□□□□ 0.06
BRCA1-227ENST00000591849 ABCC5O15440 1437 aa15.4■□□□□ 0.06
BRCA1-227ENST00000591849 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
BRCA1-227ENST00000591849 ITGAEP38570 1179 aa15.39■□□□□ 0.05
BRCA1-227ENST00000591849 HSPA2P54652 639 aa15.39■□□□□ 0.05
BRCA1-227ENST00000591849 TCOF1Q13428 1488 aaKnown RBP15.39■□□□□ 0.05
BRCA1-227ENST00000591849 STRCQ7RTU9 1775 aa15.39■□□□□ 0.05
BRCA1-227ENST00000591849 WASHC2CQ9Y4E1 1318 aa15.38■□□□□ 0.05
BRCA1-227ENST00000591849 MROH2AA6NES4 1674 aa15.38■□□□□ 0.05
BRCA1-227ENST00000591849 ANKRD30AQ9BXX3 1397 aa15.37■□□□□ 0.05
BRCA1-227ENST00000591849 DAPK1P53355 1430 aa15.37■□□□□ 0.05
BRCA1-227ENST00000591849 UHRF1BP1Q6BDS2 1440 aa15.36■□□□□ 0.05
BRCA1-227ENST00000591849 ADGBQ8N7X0 1667 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms