RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
NPC1-211ENST00000591075 TROQ12816 1431 aaPredicted RBP13.82□□□□□ -0.2
NPC1-211ENST00000591075 FANCAO15360 1455 aa13.82□□□□□ -0.2
NPC1-211ENST00000591075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.82□□□□□ -0.2
NPC1-211ENST00000591075 APLP2Q06481 763 aa13.82□□□□□ -0.2
NPC1-211ENST00000591075 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
NPC1-211ENST00000591075 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
NPC1-211ENST00000591075 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
NPC1-211ENST00000591075 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
NPC1-211ENST00000591075 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
NPC1-211ENST00000591075 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
NPC1-211ENST00000591075 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
NPC1-211ENST00000591075 PLCH2O75038 1416 aa13.79□□□□□ -0.2
NPC1-211ENST00000591075 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
NPC1-211ENST00000591075 KIF14Q15058 1648 aa13.79□□□□□ -0.2
NPC1-211ENST00000591075 TTC37Q6PGP7 1564 aa13.78□□□□□ -0.2
NPC1-211ENST00000591075 ADGRL1O94910 1474 aa13.76□□□□□ -0.21
NPC1-211ENST00000591075 ARHGAP5Q13017 1502 aa13.75□□□□□ -0.21
NPC1-211ENST00000591075 SCAPERQ9BY12 1400 aa13.75□□□□□ -0.21
NPC1-211ENST00000591075 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
NPC1-211ENST00000591075 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
NPC1-211ENST00000591075 ZNF777Q9ULD5 760 aaPredicted RBP13.74□□□□□ -0.21
NPC1-211ENST00000591075 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
NPC1-211ENST00000591075 MYO5CQ9NQX4 1742 aa13.72□□□□□ -0.21
NPC1-211ENST00000591075 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
NPC1-211ENST00000591075 LRRIQ1Q96JM4 1722 aa13.7□□□□□ -0.22
NPC1-211ENST00000591075 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
NPC1-211ENST00000591075 CFDP1Q9UEE9 299 aaPredicted RBP13.69□□□□□ -0.22
NPC1-211ENST00000591075 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
NPC1-211ENST00000591075 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
NPC1-211ENST00000591075 MAGI2Q86UL8 1455 aa13.67□□□□□ -0.22
NPC1-211ENST00000591075 ZFYVE16Q7Z3T8 1539 aa13.66□□□□□ -0.22
NPC1-211ENST00000591075 MLECQ14165 292 aa13.66□□□□□ -0.22
NPC1-211ENST00000591075 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
NPC1-211ENST00000591075 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
NPC1-211ENST00000591075 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
NPC1-211ENST00000591075 ARHGEF40Q8TER5 1519 aa13.64□□□□□ -0.23
NPC1-211ENST00000591075 ZMYM4Q5VZL5 1548 aa13.63□□□□□ -0.23
NPC1-211ENST00000591075 YEATS2Q9ULM3 1422 aa13.63□□□□□ -0.23
NPC1-211ENST00000591075 PREX2Q70Z35 1606 aa13.62□□□□□ -0.23
NPC1-211ENST00000591075 EHBP1L1Q8N3D4 1523 aa13.62□□□□□ -0.23
NPC1-211ENST00000591075 ATP10AO60312 1499 aa13.61□□□□□ -0.23
NPC1-211ENST00000591075 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
NPC1-211ENST00000591075 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.23
NPC1-211ENST00000591075 ESF1Q9H501 851 aaKnown RBP13.61□□□□□ -0.23
NPC1-211ENST00000591075 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
NPC1-211ENST00000591075 C9orf84Q5VXU9 1444 aa13.6□□□□□ -0.23
NPC1-211ENST00000591075 PLEKHH2Q8IVE3 1493 aa13.6□□□□□ -0.23
NPC1-211ENST00000591075 SPAG9O60271 1321 aaKnown RBP13.6□□□□□ -0.23
NPC1-211ENST00000591075 TIAM1Q13009 1591 aa13.58□□□□□ -0.23
NPC1-211ENST00000591075 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
NPC1-211ENST00000591075 DSG3P32926 999 aa13.58□□□□□ -0.24
NPC1-211ENST00000591075 CDC42BPAQ5VT25 1732 aa13.58□□□□□ -0.24
NPC1-211ENST00000591075 ABCC1P33527 1531 aa13.58□□□□□ -0.24
NPC1-211ENST00000591075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.243e-8■□□□□ 8.7
NPC1-211ENST00000591075 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
NPC1-211ENST00000591075 PTPRMP28827 1452 aa13.55□□□□□ -0.24
NPC1-211ENST00000591075 LRRC9Q6ZRR7 1453 aa13.55□□□□□ -0.24
NPC1-211ENST00000591075 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
NPC1-211ENST00000591075 HECW2Q9P2P5 1572 aa13.55□□□□□ -0.24
NPC1-211ENST00000591075 BCORL1Q5H9F3 1711 aa13.55□□□□□ -0.24
NPC1-211ENST00000591075 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
NPC1-211ENST00000591075 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
NPC1-211ENST00000591075 ARHGEF12Q9NZN5 1544 aa13.54□□□□□ -0.24
NPC1-211ENST00000591075 KDM5CP41229 1560 aa13.54□□□□□ -0.24
NPC1-211ENST00000591075 SUPT6HQ7KZ85 1726 aaKnown RBP13.54□□□□□ -0.24
NPC1-211ENST00000591075 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
NPC1-211ENST00000591075 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
NPC1-211ENST00000591075 TRIM26Q12899 539 aaPredicted RBP13.53□□□□□ -0.24
NPC1-211ENST00000591075 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
NPC1-211ENST00000591075 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
NPC1-211ENST00000591075 ADAMTSL3P82987 1691 aa13.53□□□□□ -0.24
NPC1-211ENST00000591075 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
NPC1-211ENST00000591075 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
NPC1-211ENST00000591075 MADDQ8WXG6 1647 aa13.52□□□□□ -0.25
NPC1-211ENST00000591075 KANK4Q5T7N3 995 aaPredicted RBP13.51□□□□□ -0.25
NPC1-211ENST00000591075 RIMS1Q86UR5 1692 aaKnown RBP13.49□□□□□ -0.25
NPC1-211ENST00000591075 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
NPC1-211ENST00000591075 ABCA6Q8N139 1617 aa13.46□□□□□ -0.25
NPC1-211ENST00000591075 ATP7AQ04656 1500 aa13.46□□□□□ -0.25
NPC1-211ENST00000591075 GGT6Q6P531 493 aa13.46□□□□□ -0.25
NPC1-211ENST00000591075 CAMSAP2Q08AD1 1489 aa13.46□□□□□ -0.25
NPC1-211ENST00000591075 CCDC141Q6ZP82 1450 aa13.45□□□□□ -0.26
NPC1-211ENST00000591075 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
NPC1-211ENST00000591075 FER1L4A9Z1Z3 1794 aa13.45□□□□□ -0.26
NPC1-211ENST00000591075 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
NPC1-211ENST00000591075 REREQ9P2R6 1566 aa13.45□□□□□ -0.26
NPC1-211ENST00000591075 A2MP01023 1474 aa13.44□□□□□ -0.26
NPC1-211ENST00000591075 MYOM3Q5VTT5 1437 aa13.44□□□□□ -0.26
NPC1-211ENST00000591075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
NPC1-211ENST00000591075 AGLP35573 1532 aa13.44□□□□□ -0.26
NPC1-211ENST00000591075 MBD5Q9P267 1494 aa13.43□□□□□ -0.26
NPC1-211ENST00000591075 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
NPC1-211ENST00000591075 SIGLEC1Q9BZZ2 1709 aa13.42□□□□□ -0.26
NPC1-211ENST00000591075 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
NPC1-211ENST00000591075 CNTLNQ9NXG0 1405 aa13.42□□□□□ -0.26
NPC1-211ENST00000591075 KIF3BO15066 747 aa13.41□□□□□ -0.26
NPC1-211ENST00000591075 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
NPC1-211ENST00000591075 DHX29Q7Z478 1369 aaKnown RBP13.4□□□□□ -0.26
NPC1-211ENST00000591075 INO80Q9ULG1 1556 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms