RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 SMG6Q86US8 1419 aaKnown RBP21.35■■□□□ 1.01
MBD1-222ENST00000590208 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
MBD1-222ENST00000590208 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
MBD1-222ENST00000590208 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
MBD1-222ENST00000590208 KDM6BO15054 1643 aa21.32■■□□□ 1
MBD1-222ENST00000590208 RTN4Q9NQC3 1192 aaKnown RBP21.32■■□□□ 1
MBD1-222ENST00000590208 RNF123Q5XPI4 1314 aa21.3■■□□□ 1
MBD1-222ENST00000590208 LRRIQ1Q96JM4 1722 aa21.3■■□□□ 1
MBD1-222ENST00000590208 NPM2Q86SE8 214 aaKnown RBP21.3■■□□□ 1
MBD1-222ENST00000590208 POLR3GLQ9BT43 218 aa21.29■■□□□ 1
MBD1-222ENST00000590208 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
MBD1-222ENST00000590208 HECW1Q76N89 1606 aa21.26■□□□□ 0.99
MBD1-222ENST00000590208 POLA1P09884 1462 aaPredicted RBP21.25■□□□□ 0.99
MBD1-222ENST00000590208 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
MBD1-222ENST00000590208 LAS1LQ9Y4W2 734 aaKnown RBP21.25■□□□□ 0.99
MBD1-222ENST00000590208 SPATA31E1Q6ZUB1 1445 aa21.24■□□□□ 0.99
MBD1-222ENST00000590208 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
MBD1-222ENST00000590208 CTTNBP2Q8WZ74 1663 aa21.23■□□□□ 0.99
MBD1-222ENST00000590208 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
MBD1-222ENST00000590208 GRIN2BQ13224 1484 aa21.21■□□□□ 0.99
MBD1-222ENST00000590208 DHX29Q7Z478 1369 aaKnown RBP21.21■□□□□ 0.99
MBD1-222ENST00000590208 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
MBD1-222ENST00000590208 MAGI3Q5TCQ9 1506 aa21.2■□□□□ 0.98
MBD1-222ENST00000590208 UGGT2Q9NYU1 1516 aa21.2■□□□□ 0.98
MBD1-222ENST00000590208 GCC2Q8IWJ2 1684 aa21.19■□□□□ 0.98
MBD1-222ENST00000590208 NEFMP07197 916 aa21.18■□□□□ 0.98
MBD1-222ENST00000590208 ANKRD30BQ9BXX2 1392 aa21.18■□□□□ 0.98
MBD1-222ENST00000590208 EHBP1L1Q8N3D4 1523 aa21.18■□□□□ 0.98
MBD1-222ENST00000590208 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
MBD1-222ENST00000590208 TEX14Q8IWB6 1497 aa21.16■□□□□ 0.98
MBD1-222ENST00000590208 RPRD2Q5VT52 1461 aaKnown RBP21.16■□□□□ 0.98
MBD1-222ENST00000590208 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
MBD1-222ENST00000590208 EXOC6Q8TAG9 804 aa21.15■□□□□ 0.98
MBD1-222ENST00000590208 PNISRQ8TF01 805 aaKnown RBP21.15■□□□□ 0.98
MBD1-222ENST00000590208 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
MBD1-222ENST00000590208 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
MBD1-222ENST00000590208 ZNF326Q5BKZ1 582 aaKnown RBP21.13■□□□□ 0.97
MBD1-222ENST00000590208 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
MBD1-222ENST00000590208 PDE4AP27815 886 aa21.12■□□□□ 0.97
MBD1-222ENST00000590208 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.12■□□□□ 0.97
MBD1-222ENST00000590208 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
MBD1-222ENST00000590208 WDR62O43379 1518 aa21.12■□□□□ 0.97
MBD1-222ENST00000590208 TMC1Q8TDI8 760 aa21.12■□□□□ 0.97
MBD1-222ENST00000590208 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
MBD1-222ENST00000590208 CUL7Q14999 1698 aa21.11■□□□□ 0.97
MBD1-222ENST00000590208 SAMD9Q5K651 1589 aa21.11■□□□□ 0.97
MBD1-222ENST00000590208 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
MBD1-222ENST00000590208 RRP1P56182 461 aaKnown RBP21.08■□□□□ 0.97
MBD1-222ENST00000590208 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
MBD1-222ENST00000590208 BACH2Q9BYV9 841 aa21.06■□□□□ 0.96
MBD1-222ENST00000590208 BCORL1Q5H9F3 1711 aa21.06■□□□□ 0.96
MBD1-222ENST00000590208 USP47Q96K76 1375 aa21.05■□□□□ 0.96
MBD1-222ENST00000590208 SKAP1Q86WV1 359 aa21.05■□□□□ 0.96
MBD1-222ENST00000590208 USP35Q9P2H5 1018 aa21.03■□□□□ 0.96
MBD1-222ENST00000590208 MIA2Q96PC5 1412 aa21.03■□□□□ 0.96
MBD1-222ENST00000590208 RCAN3Q9UKA8 241 aa21.01■□□□□ 0.95
MBD1-222ENST00000590208 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
MBD1-222ENST00000590208 WASHC2CQ9Y4E1 1318 aa21■□□□□ 0.95
MBD1-222ENST00000590208 FBLN2P98095 1184 aa21■□□□□ 0.95
MBD1-222ENST00000590208 BRPF3Q9ULD4 1205 aa21■□□□□ 0.95
MBD1-222ENST00000590208 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
MBD1-222ENST00000590208 CDK13Q14004 1512 aaKnown RBP20.98■□□□□ 0.95
MBD1-222ENST00000590208 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
MBD1-222ENST00000590208 LRPPRCP42704 1394 aaKnown RBP20.96■□□□□ 0.95
MBD1-222ENST00000590208 DAPK1P53355 1430 aa20.96■□□□□ 0.95
MBD1-222ENST00000590208 PLIN1O60240 522 aa20.95■□□□□ 0.94
MBD1-222ENST00000590208 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
MBD1-222ENST00000590208 MS4A1P11836 297 aa20.94■□□□□ 0.94
MBD1-222ENST00000590208 SLC4A3P48751 1232 aa20.94■□□□□ 0.94
MBD1-222ENST00000590208 ABCC5O15440 1437 aa20.93■□□□□ 0.94
MBD1-222ENST00000590208 CDCA7LQ96GN5 454 aa20.93■□□□□ 0.94
MBD1-222ENST00000590208 GAPVD1Q14C86 1478 aa20.93■□□□□ 0.94
MBD1-222ENST00000590208 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
MBD1-222ENST00000590208 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
MBD1-222ENST00000590208 KIF15Q9NS87 1388 aa20.9■□□□□ 0.94
MBD1-222ENST00000590208 MYBBP1AQ9BQG0 1328 aaKnown RBP20.9■□□□□ 0.94
MBD1-222ENST00000590208 MBD5Q9P267 1494 aa20.9■□□□□ 0.94
MBD1-222ENST00000590208 GSE1Q14687 1217 aa20.89■□□□□ 0.94
MBD1-222ENST00000590208 PZPP20742 1482 aa20.89■□□□□ 0.93
MBD1-222ENST00000590208 BRD4O60885 1362 aaPredicted RBP20.88■□□□□ 0.93
MBD1-222ENST00000590208 ARID4BQ4LE39 1312 aaPredicted RBP20.88■□□□□ 0.93
MBD1-222ENST00000590208 NFKBIBQ15653 356 aa20.88■□□□□ 0.93
MBD1-222ENST00000590208 CARD11Q9BXL7 1154 aa20.88■□□□□ 0.93
MBD1-222ENST00000590208 KDM5CP41229 1560 aa20.88■□□□□ 0.93
MBD1-222ENST00000590208 ST20-MTHFSA0A0A6YYL1 179 aa20.87■□□□□ 0.93
MBD1-222ENST00000590208 PKD2Q13563 968 aa20.86■□□□□ 0.93
MBD1-222ENST00000590208 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
MBD1-222ENST00000590208 ROCK2O75116 1388 aaKnown RBP20.85■□□□□ 0.93
MBD1-222ENST00000590208 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
MBD1-222ENST00000590208 FRAT1Q92837 279 aaPredicted RBP20.84■□□□□ 0.93
MBD1-222ENST00000590208 RALBP1Q15311 655 aa20.84■□□□□ 0.93
MBD1-222ENST00000590208 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.93
MBD1-222ENST00000590208 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.92
MBD1-222ENST00000590208 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
MBD1-222ENST00000590208 KIF14Q15058 1648 aa20.8■□□□□ 0.92
MBD1-222ENST00000590208 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
MBD1-222ENST00000590208 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
MBD1-222ENST00000590208 C20orf194Q5TEA3 1177 aa20.78■□□□□ 0.92
MBD1-222ENST00000590208 EIF5BO60841 1220 aaKnown RBP20.78■□□□□ 0.92
MBD1-222ENST00000590208 NLRP13Q86W25 1043 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms