RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 CDC42BPBQ9Y5S2 1711 aa28.78■■■□□ 2.2
CIRBP-227ENST00000590188 POGZQ7Z3K3 1410 aa28.77■■■□□ 2.2
CIRBP-227ENST00000590188 MTUS2Q5JR59 1369 aa28.77■■■□□ 2.2
CIRBP-227ENST00000590188 PREX2Q70Z35 1606 aa28.76■■■□□ 2.2
CIRBP-227ENST00000590188 ARHGEF40Q8TER5 1519 aa28.75■■■□□ 2.19
CIRBP-227ENST00000590188 ARID4BQ4LE39 1312 aaPredicted RBP28.74■■■□□ 2.19
CIRBP-227ENST00000590188 YEATS2Q9ULM3 1422 aa28.74■■■□□ 2.19
CIRBP-227ENST00000590188 ZMYM4Q5VZL5 1548 aa28.74■■■□□ 2.19
CIRBP-227ENST00000590188 CDC42BPAQ5VT25 1732 aa28.72■■■□□ 2.19
CIRBP-227ENST00000590188 ZFYVE16Q7Z3T8 1539 aa28.72■■■□□ 2.19
CIRBP-227ENST00000590188 ZNF777Q9ULD5 760 aaPredicted RBP28.7■■■□□ 2.18
CIRBP-227ENST00000590188 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
CIRBP-227ENST00000590188 AFAP1Q8N556 730 aa28.68■■■□□ 2.18
CIRBP-227ENST00000590188 EHBP1L1Q8N3D4 1523 aa28.66■■■□□ 2.18
CIRBP-227ENST00000590188 GPATCH8Q9UKJ3 1502 aaKnown RBP28.66■■■□□ 2.18
CIRBP-227ENST00000590188 MYT1LQ9UL68 1186 aa28.66■■■□□ 2.18
CIRBP-227ENST00000590188 CCNB3Q8WWL7 1395 aa28.65■■■□□ 2.18
CIRBP-227ENST00000590188 ZNF518AQ6AHZ1 1483 aa28.65■■■□□ 2.18
CIRBP-227ENST00000590188 MAGI2Q86UL8 1455 aa28.65■■■□□ 2.18
CIRBP-227ENST00000590188 ABCC1P33527 1531 aa28.64■■■□□ 2.18
CIRBP-227ENST00000590188 ARHGEF12Q9NZN5 1544 aa28.64■■■□□ 2.17
CIRBP-227ENST00000590188 TRAPPC8Q9Y2L5 1435 aa28.61■■■□□ 2.17
CIRBP-227ENST00000590188 ITSN2Q9NZM3 1697 aa28.61■■■□□ 2.17
CIRBP-227ENST00000590188 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
CIRBP-227ENST00000590188 SIGLEC1Q9BZZ2 1709 aa28.6■■■□□ 2.17
CIRBP-227ENST00000590188 TIAM1Q13009 1591 aa28.59■■■□□ 2.17
CIRBP-227ENST00000590188 SAMD9LQ8IVG5 1584 aa28.59■■■□□ 2.17
CIRBP-227ENST00000590188 CFDP1Q9UEE9 299 aaPredicted RBP28.59■■■□□ 2.17
CIRBP-227ENST00000590188 KDM5CP41229 1560 aa28.58■■■□□ 2.17
CIRBP-227ENST00000590188 ADAMTSL3P82987 1691 aa28.58■■■□□ 2.17
CIRBP-227ENST00000590188 MLECQ14165 292 aa28.56■■■□□ 2.16
CIRBP-227ENST00000590188 HECW2Q9P2P5 1572 aa28.55■■■□□ 2.16
CIRBP-227ENST00000590188 SYCP2Q9BX26 1530 aa28.55■■■□□ 2.16
CIRBP-227ENST00000590188 MADDQ8WXG6 1647 aa28.54■■■□□ 2.16
CIRBP-227ENST00000590188 ATP10AO60312 1499 aa28.54■■■□□ 2.16
CIRBP-227ENST00000590188 HNRNPMP52272 730 aaKnown RBP eCLIP28.54■■■□□ 2.16
CIRBP-227ENST00000590188 C9orf84Q5VXU9 1444 aa28.53■■■□□ 2.16
CIRBP-227ENST00000590188 NCOA2Q15596 1464 aa28.51■■■□□ 2.15
CIRBP-227ENST00000590188 SUPT6HQ7KZ85 1726 aaKnown RBP28.5■■■□□ 2.15
CIRBP-227ENST00000590188 PTPRMP28827 1452 aa28.49■■■□□ 2.15
CIRBP-227ENST00000590188 DIP2CQ9Y2E4 1556 aa28.49■■■□□ 2.15
CIRBP-227ENST00000590188 ZNF644Q9H582 1327 aaPredicted RBP28.48■■■□□ 2.15
CIRBP-227ENST00000590188 MLH3Q9UHC1 1453 aa28.48■■■□□ 2.15
CIRBP-227ENST00000590188 ABCA6Q8N139 1617 aa28.48■■■□□ 2.15
CIRBP-227ENST00000590188 LRRC9Q6ZRR7 1453 aa28.47■■■□□ 2.15
CIRBP-227ENST00000590188 PLPPR3Q6T4P5 718 aa28.47■■■□□ 2.15
CIRBP-227ENST00000590188 RIMS1Q86UR5 1692 aaKnown RBP28.47■■■□□ 2.15
CIRBP-227ENST00000590188 KANK4Q5T7N3 995 aaPredicted RBP28.46■■■□□ 2.15
CIRBP-227ENST00000590188 PLEKHH2Q8IVE3 1493 aa28.45■■■□□ 2.14
CIRBP-227ENST00000590188 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
CIRBP-227ENST00000590188 KIDINS220Q9ULH0 1771 aa28.42■■■□□ 2.14
CIRBP-227ENST00000590188 SPAG9O60271 1321 aaKnown RBP28.42■■■□□ 2.14
CIRBP-227ENST00000590188 APLP2Q06481 763 aa28.38■■■□□ 2.13
CIRBP-227ENST00000590188 MAP3K1Q13233 1512 aa28.38■■■□□ 2.13
CIRBP-227ENST00000590188 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
CIRBP-227ENST00000590188 CAMSAP2Q08AD1 1489 aa28.34■■■□□ 2.13
CIRBP-227ENST00000590188 ATP7AQ04656 1500 aa28.34■■■□□ 2.13
CIRBP-227ENST00000590188 REREQ9P2R6 1566 aa28.34■■■□□ 2.13
CIRBP-227ENST00000590188 MBD5Q9P267 1494 aa28.33■■■□□ 2.13
CIRBP-227ENST00000590188 INO80Q9ULG1 1556 aaPredicted RBP28.31■■■□□ 2.12
CIRBP-227ENST00000590188 AGLP35573 1532 aa28.27■■■□□ 2.12
CIRBP-227ENST00000590188 CCDC141Q6ZP82 1450 aa28.24■■■□□ 2.11
CIRBP-227ENST00000590188 CEBPAP49715 358 aaPredicted RBP28.24■■■□□ 2.11
CIRBP-227ENST00000590188 A2MP01023 1474 aa28.22■■■□□ 2.11
CIRBP-227ENST00000590188 MYOM3Q5VTT5 1437 aa28.22■■■□□ 2.11
CIRBP-227ENST00000590188 ESF1Q9H501 851 aaKnown RBP28.2■■■□□ 2.1
CIRBP-227ENST00000590188 PLXNC1O60486 1568 aa28.17■■■□□ 2.1
CIRBP-227ENST00000590188 RTEL1-TNFRSF6BF6WH68 1400 aa28.17■■■□□ 2.1
CIRBP-227ENST00000590188 ADGBQ8N7X0 1667 aa28.16■■■□□ 2.1
CIRBP-227ENST00000590188 ARHGEF5Q12774 1597 aa28.16■■■□□ 2.1
CIRBP-227ENST00000590188 RSPH4AQ5TD94 716 aa28.15■■■□□ 2.1
CIRBP-227ENST00000590188 MIA2Q96PC5 1412 aa28.15■■■□□ 2.1
CIRBP-227ENST00000590188 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
CIRBP-227ENST00000590188 TSPY4P0CV99 314 aa28.13■■■□□ 2.09
CIRBP-227ENST00000590188 TSPY10P0CW01 314 aa28.13■■■□□ 2.09
CIRBP-227ENST00000590188 GGT6Q6P531 493 aa28.13■■■□□ 2.09
CIRBP-227ENST00000590188 HSPA2P54652 639 aa28.1■■■□□ 2.09
CIRBP-227ENST00000590188 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
CIRBP-227ENST00000590188 C3P01024 1663 aa28.08■■■□□ 2.09
CIRBP-227ENST00000590188 PTPN23Q9H3S7 1636 aa28.07■■■□□ 2.08
CIRBP-227ENST00000590188 CNTLNQ9NXG0 1405 aa28.05■■■□□ 2.08
CIRBP-227ENST00000590188 FGD6Q6ZV73 1430 aa28.04■■■□□ 2.08
CIRBP-227ENST00000590188 CLTCQ00610 1675 aaKnown RBP28.03■■■□□ 2.08
CIRBP-227ENST00000590188 KIF3BO15066 747 aa28.03■■■□□ 2.08
CIRBP-227ENST00000590188 MAST1Q9Y2H9 1570 aa28.01■■■□□ 2.07
CIRBP-227ENST00000590188 PREX1Q8TCU6 1659 aa28■■■□□ 2.07
CIRBP-227ENST00000590188 ZMYM3Q14202 1370 aa27.99■■■□□ 2.07
CIRBP-227ENST00000590188 PPARGC1BQ86YN6 1023 aaKnown RBP27.98■■■□□ 2.07
CIRBP-227ENST00000590188 ABCC5O15440 1437 aa27.97■■■□□ 2.07
CIRBP-227ENST00000590188 UHRF1BP1Q6BDS2 1440 aa27.97■■■□□ 2.07
CIRBP-227ENST00000590188 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
CIRBP-227ENST00000590188 TCOF1Q13428 1488 aaKnown RBP27.96■■■□□ 2.07
CIRBP-227ENST00000590188 DAPK1P53355 1430 aa27.93■■■□□ 2.06
CIRBP-227ENST00000590188 CROCC2H7BZ55 1655 aa27.93■■■□□ 2.06
CIRBP-227ENST00000590188 FAM50AQ14320 339 aaKnown RBP27.92■■■□□ 2.06
CIRBP-227ENST00000590188 CHIC2Q9UKJ5 165 aa27.91■■■□□ 2.06
CIRBP-227ENST00000590188 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
CIRBP-227ENST00000590188 PPP6R1Q9UPN7 881 aa27.9■■■□□ 2.06
CIRBP-227ENST00000590188 RRP7BPQ9NSQ0 103 aa27.89■■■□□ 2.06
CIRBP-227ENST00000590188 SHANK2Q9UPX8 1470 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms