RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.4□□□□□ -0.263e-6■■■□□ 15.2
KDM4B-207ENST00000588961 ABCA9Q8IUA7 1624 aa13.4□□□□□ -0.26
KDM4B-207ENST00000588961 KIF14Q15058 1648 aa13.39□□□□□ -0.27
KDM4B-207ENST00000588961 TTC37Q6PGP7 1564 aa13.37□□□□□ -0.27
KDM4B-207ENST00000588961 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
KDM4B-207ENST00000588961 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
KDM4B-207ENST00000588961 MTUS2Q5JR59 1369 aa13.35□□□□□ -0.27
KDM4B-207ENST00000588961 TIAM1Q13009 1591 aa13.33□□□□□ -0.28
KDM4B-207ENST00000588961 KDM6BO15054 1643 aa13.33□□□□□ -0.28
KDM4B-207ENST00000588961 APLP2Q06481 763 aa13.33□□□□□ -0.28
KDM4B-207ENST00000588961 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-207ENST00000588961 COL17A1Q9UMD9 1497 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-207ENST00000588961 PLCH2O75038 1416 aa13.31□□□□□ -0.28
KDM4B-207ENST00000588961 FANCAO15360 1455 aa13.3□□□□□ -0.28
KDM4B-207ENST00000588961 MYO5CQ9NQX4 1742 aa13.3□□□□□ -0.28
KDM4B-207ENST00000588961 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
KDM4B-207ENST00000588961 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
KDM4B-207ENST00000588961 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
KDM4B-207ENST00000588961 NEO1Q92859 1461 aa13.29□□□□□ -0.28
KDM4B-207ENST00000588961 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
KDM4B-207ENST00000588961 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
KDM4B-207ENST00000588961 MAP3K1Q13233 1512 aa13.28□□□□□ -0.28
KDM4B-207ENST00000588961 RAPGEF3O95398 923 aa13.27□□□□□ -0.29
KDM4B-207ENST00000588961 PHLDB1Q86UU1 1377 aa13.27□□□□□ -0.29
KDM4B-207ENST00000588961 CCNB3Q8WWL7 1395 aa13.27□□□□□ -0.29
KDM4B-207ENST00000588961 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
KDM4B-207ENST00000588961 GPATCH8Q9UKJ3 1502 aaKnown RBP13.26□□□□□ -0.29
KDM4B-207ENST00000588961 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
KDM4B-207ENST00000588961 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
KDM4B-207ENST00000588961 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
KDM4B-207ENST00000588961 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
KDM4B-207ENST00000588961 CFAP74Q9C0B2 1584 aa13.24□□□□□ -0.29
KDM4B-207ENST00000588961 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
KDM4B-207ENST00000588961 CFDP1Q9UEE9 299 aaPredicted RBP13.24□□□□□ -0.29
KDM4B-207ENST00000588961 SUPT6HQ7KZ85 1726 aaKnown RBP13.24□□□□□ -0.29
KDM4B-207ENST00000588961 ADGRL1O94910 1474 aa13.23□□□□□ -0.29
KDM4B-207ENST00000588961 SCAPERQ9BY12 1400 aa13.23□□□□□ -0.29
KDM4B-207ENST00000588961 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
KDM4B-207ENST00000588961 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
KDM4B-207ENST00000588961 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
KDM4B-207ENST00000588961 HNRNPMP52272 730 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■■■□ 23.3
KDM4B-207ENST00000588961 AFAP1Q8N556 730 aa13.19□□□□□ -0.3
KDM4B-207ENST00000588961 FRMPD1Q5SYB0 1578 aa13.19□□□□□ -0.3
KDM4B-207ENST00000588961 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
KDM4B-207ENST00000588961 SAMD9LQ8IVG5 1584 aa13.18□□□□□ -0.3
KDM4B-207ENST00000588961 RICTORQ6R327 1708 aa13.17□□□□□ -0.3
KDM4B-207ENST00000588961 ITSN2Q9NZM3 1697 aa13.17□□□□□ -0.3
KDM4B-207ENST00000588961 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
KDM4B-207ENST00000588961 TRAPPC8Q9Y2L5 1435 aa13.16□□□□□ -0.3
KDM4B-207ENST00000588961 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
KDM4B-207ENST00000588961 ABCC1P33527 1531 aa13.16□□□□□ -0.3
KDM4B-207ENST00000588961 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
KDM4B-207ENST00000588961 SYCP2Q9BX26 1530 aa13.14□□□□□ -0.31
KDM4B-207ENST00000588961 ZNF518AQ6AHZ1 1483 aa13.13□□□□□ -0.31
KDM4B-207ENST00000588961 CAMSAP2Q08AD1 1489 aa13.12□□□□□ -0.31
KDM4B-207ENST00000588961 YEATS2Q9ULM3 1422 aa13.12□□□□□ -0.31
KDM4B-207ENST00000588961 KIAA1107Q9UPP5 1409 aa13.12□□□□□ -0.31
KDM4B-207ENST00000588961 PLEKHH2Q8IVE3 1493 aa13.11□□□□□ -0.31
KDM4B-207ENST00000588961 ZMYM4Q5VZL5 1548 aa13.11□□□□□ -0.31
KDM4B-207ENST00000588961 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
KDM4B-207ENST00000588961 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
KDM4B-207ENST00000588961 ZFYVE16Q7Z3T8 1539 aa13.09□□□□□ -0.31
KDM4B-207ENST00000588961 KDM5CP41229 1560 aa13.09□□□□□ -0.31
KDM4B-207ENST00000588961 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
KDM4B-207ENST00000588961 MAGI2Q86UL8 1455 aa13.08□□□□□ -0.32
KDM4B-207ENST00000588961 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
KDM4B-207ENST00000588961 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
KDM4B-207ENST00000588961 ARHGEF40Q8TER5 1519 aa13.07□□□□□ -0.32
KDM4B-207ENST00000588961 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
KDM4B-207ENST00000588961 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
KDM4B-207ENST00000588961 MLH3Q9UHC1 1453 aa13.06□□□□□ -0.32
KDM4B-207ENST00000588961 FAM50AQ14320 339 aaKnown RBP13.06□□□□□ -0.32
KDM4B-207ENST00000588961 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
KDM4B-207ENST00000588961 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
KDM4B-207ENST00000588961 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
KDM4B-207ENST00000588961 ATP10AO60312 1499 aa13.04□□□□□ -0.32
KDM4B-207ENST00000588961 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
KDM4B-207ENST00000588961 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
KDM4B-207ENST00000588961 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
KDM4B-207ENST00000588961 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
KDM4B-207ENST00000588961 DIP2CQ9Y2E4 1556 aa13.03□□□□□ -0.32
KDM4B-207ENST00000588961 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
KDM4B-207ENST00000588961 SIGLEC1Q9BZZ2 1709 aa13.03□□□□□ -0.32
KDM4B-207ENST00000588961 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
KDM4B-207ENST00000588961 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
KDM4B-207ENST00000588961 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
KDM4B-207ENST00000588961 MLECQ14165 292 aa13.02□□□□□ -0.33
KDM4B-207ENST00000588961 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
KDM4B-207ENST00000588961 INO80Q9ULG1 1556 aaPredicted RBP13.01□□□□□ -0.33
KDM4B-207ENST00000588961 ABCC5O15440 1437 aa13□□□□□ -0.33
KDM4B-207ENST00000588961 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
KDM4B-207ENST00000588961 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
KDM4B-207ENST00000588961 DAPK1P53355 1430 aa12.98□□□□□ -0.33
KDM4B-207ENST00000588961 CLSPNQ9HAW4 1339 aa12.98□□□□□ -0.33
KDM4B-207ENST00000588961 ITGAEP38570 1179 aa12.98□□□□□ -0.33
KDM4B-207ENST00000588961 A2MP01023 1474 aa12.97□□□□□ -0.33
KDM4B-207ENST00000588961 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
KDM4B-207ENST00000588961 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.33
KDM4B-207ENST00000588961 DNMT1P26358 1616 aaKnown RBP12.96□□□□□ -0.33
KDM4B-207ENST00000588961 CCER1Q8TC90 406 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms