RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
KDM4B-207ENST00000588961 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
KDM4B-207ENST00000588961 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
KDM4B-207ENST00000588961 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
KDM4B-207ENST00000588961 ABCC9O60706 1549 aa17.62■□□□□ 0.41
KDM4B-207ENST00000588961 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
KDM4B-207ENST00000588961 SENP3Q9H4L4 574 aaPredicted RBP17.48■□□□□ 0.39
KDM4B-207ENST00000588961 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
KDM4B-207ENST00000588961 ZCCHC6Q5VYS8 1495 aaKnown RBP16.94■□□□□ 0.3
KDM4B-207ENST00000588961 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
KDM4B-207ENST00000588961 NACADO15069 1562 aa16.91■□□□□ 0.3
KDM4B-207ENST00000588961 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
KDM4B-207ENST00000588961 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
KDM4B-207ENST00000588961 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
KDM4B-207ENST00000588961 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
KDM4B-207ENST00000588961 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
KDM4B-207ENST00000588961 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
KDM4B-207ENST00000588961 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
KDM4B-207ENST00000588961 FOXD1Q16676 465 aa16.23■□□□□ 0.19
KDM4B-207ENST00000588961 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
KDM4B-207ENST00000588961 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
KDM4B-207ENST00000588961 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
KDM4B-207ENST00000588961 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
KDM4B-207ENST00000588961 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
KDM4B-207ENST00000588961 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
KDM4B-207ENST00000588961 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
KDM4B-207ENST00000588961 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
KDM4B-207ENST00000588961 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
KDM4B-207ENST00000588961 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
KDM4B-207ENST00000588961 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
KDM4B-207ENST00000588961 PEG3Q9GZU2 1588 aa15.56■□□□□ 0.08
KDM4B-207ENST00000588961 WIZO95785 1651 aa15.55■□□□□ 0.08
KDM4B-207ENST00000588961 RSF1Q96T23 1441 aaPredicted RBP15.55■□□□□ 0.08
KDM4B-207ENST00000588961 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
KDM4B-207ENST00000588961 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
KDM4B-207ENST00000588961 PPP6R1Q9UPN7 881 aa15.5■□□□□ 0.07
KDM4B-207ENST00000588961 ADRA2BP18089 450 aa15.49■□□□□ 0.07
KDM4B-207ENST00000588961 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
KDM4B-207ENST00000588961 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
KDM4B-207ENST00000588961 PIAS4Q8N2W9 510 aaPredicted RBP15.29■□□□□ 0.04
KDM4B-207ENST00000588961 NESP48681 1621 aa15.28■□□□□ 0.04
KDM4B-207ENST00000588961 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
KDM4B-207ENST00000588961 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
KDM4B-207ENST00000588961 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
KDM4B-207ENST00000588961 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
KDM4B-207ENST00000588961 CFTRP13569 1480 aa15.1■□□□□ 0.01
KDM4B-207ENST00000588961 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
KDM4B-207ENST00000588961 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
KDM4B-207ENST00000588961 MSH5O43196 834 aa15.04■□□□□ -0
KDM4B-207ENST00000588961 FANCD2Q9BXW9 1451 aa15.02■□□□□ -0
KDM4B-207ENST00000588961 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
KDM4B-207ENST00000588961 THOC2Q8NI27 1593 aaKnown RBP14.97□□□□□ -0.01
KDM4B-207ENST00000588961 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
KDM4B-207ENST00000588961 MRC2Q9UBG0 1479 aa14.94□□□□□ -0.02
KDM4B-207ENST00000588961 CUX2O14529 1486 aa14.91□□□□□ -0.02
KDM4B-207ENST00000588961 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
KDM4B-207ENST00000588961 WDR62O43379 1518 aa14.87□□□□□ -0.03
KDM4B-207ENST00000588961 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
KDM4B-207ENST00000588961 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
KDM4B-207ENST00000588961 ABCC8Q09428 1581 aa14.75□□□□□ -0.05
KDM4B-207ENST00000588961 CUX1P39880 1505 aa14.72□□□□□ -0.05
KDM4B-207ENST00000588961 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
KDM4B-207ENST00000588961 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.065e-6■■■■■ 29.2
KDM4B-207ENST00000588961 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
KDM4B-207ENST00000588961 IFT140Q96RY7 1462 aa14.65□□□□□ -0.06
KDM4B-207ENST00000588961 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
KDM4B-207ENST00000588961 SOGA1O94964 1423 aa14.63□□□□□ -0.07
KDM4B-207ENST00000588961 ZNF608Q9ULD9 1512 aaPredicted RBP14.62□□□□□ -0.07
KDM4B-207ENST00000588961 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
KDM4B-207ENST00000588961 TARBP1Q13395 1621 aaKnown RBP14.61□□□□□ -0.07
KDM4B-207ENST00000588961 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
KDM4B-207ENST00000588961 BIVM-ERCC5R4GMW8 1640 aa14.58□□□□□ -0.08
KDM4B-207ENST00000588961 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
KDM4B-207ENST00000588961 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.088e-10■■■■□ 20.5
KDM4B-207ENST00000588961 EIF4G3O43432 1585 aaKnown RBP14.53□□□□□ -0.08
KDM4B-207ENST00000588961 WDR97A6NE52 1622 aa14.49□□□□□ -0.09
KDM4B-207ENST00000588961 ABCA10Q8WWZ4 1543 aa14.49□□□□□ -0.09
KDM4B-207ENST00000588961 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
KDM4B-207ENST00000588961 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
KDM4B-207ENST00000588961 FBLN2P98095 1184 aa14.42□□□□□ -0.1
KDM4B-207ENST00000588961 GRIN2BQ13224 1484 aa14.42□□□□□ -0.1
KDM4B-207ENST00000588961 ABCA5Q8WWZ7 1642 aa14.41□□□□□ -0.1
KDM4B-207ENST00000588961 DNAJC5Q9H3Z4 198 aa14.41□□□□□ -0.1
KDM4B-207ENST00000588961 SNAPC4Q5SXM2 1469 aa14.4□□□□□ -0.1
KDM4B-207ENST00000588961 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
KDM4B-207ENST00000588961 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
KDM4B-207ENST00000588961 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
KDM4B-207ENST00000588961 MAGI1Q96QZ7 1491 aaPredicted RBP14.35□□□□□ -0.11
KDM4B-207ENST00000588961 CHD1O14646 1710 aa14.34□□□□□ -0.11
KDM4B-207ENST00000588961 KIF27Q86VH2 1401 aa14.33□□□□□ -0.11
KDM4B-207ENST00000588961 SYNJ2O15056 1496 aa14.31□□□□□ -0.12
KDM4B-207ENST00000588961 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
KDM4B-207ENST00000588961 RUSC2Q8N2Y8 1516 aa14.3□□□□□ -0.12
KDM4B-207ENST00000588961 IGF1RP08069 1367 aa14.29□□□□□ -0.12
KDM4B-207ENST00000588961 ADAMTS12P58397 1594 aa14.27□□□□□ -0.12
KDM4B-207ENST00000588961 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
KDM4B-207ENST00000588961 GRIN2AQ12879 1464 aa14.24□□□□□ -0.13
KDM4B-207ENST00000588961 CARMIL1Q5VZK9 1371 aa14.21□□□□□ -0.14
KDM4B-207ENST00000588961 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
KDM4B-207ENST00000588961 FAM9AQ8IZU1 332 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms