RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 EFCAB2Q5VUJ9 269 aa12.56□□□□□ -0.4
C19orf53-204ENST00000588858 ITSN2Q9NZM3 1697 aa12.56□□□□□ -0.4
C19orf53-204ENST00000588858 FANCAO15360 1455 aa12.55□□□□□ -0.4
C19orf53-204ENST00000588858 CDC42BPAQ5VT25 1732 aa12.55□□□□□ -0.4
C19orf53-204ENST00000588858 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
C19orf53-204ENST00000588858 CDC42BPBQ9Y5S2 1711 aa12.54□□□□□ -0.4
C19orf53-204ENST00000588858 PLEKHH2Q8IVE3 1493 aa12.54□□□□□ -0.4
C19orf53-204ENST00000588858 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
C19orf53-204ENST00000588858 ARHGAP5Q13017 1502 aa12.52□□□□□ -0.4
C19orf53-204ENST00000588858 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.41
C19orf53-204ENST00000588858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.52□□□□□ -0.41
C19orf53-204ENST00000588858 TCOF1Q13428 1488 aaKnown RBP12.52□□□□□ -0.41
C19orf53-204ENST00000588858 FGD6Q6ZV73 1430 aa12.51□□□□□ -0.41
C19orf53-204ENST00000588858 ABCC1P33527 1531 aa12.5□□□□□ -0.41
C19orf53-204ENST00000588858 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
C19orf53-204ENST00000588858 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
C19orf53-204ENST00000588858 SAMD9LQ8IVG5 1584 aa12.48□□□□□ -0.41
C19orf53-204ENST00000588858 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
C19orf53-204ENST00000588858 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
C19orf53-204ENST00000588858 DENND4BO75064 1496 aaPredicted RBP12.47□□□□□ -0.41
C19orf53-204ENST00000588858 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
C19orf53-204ENST00000588858 CAMSAP2Q08AD1 1489 aa12.46□□□□□ -0.41
C19orf53-204ENST00000588858 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
C19orf53-204ENST00000588858 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.41
C19orf53-204ENST00000588858 POGZQ7Z3K3 1410 aa12.46□□□□□ -0.41
C19orf53-204ENST00000588858 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.41
C19orf53-204ENST00000588858 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.42
C19orf53-204ENST00000588858 ARHGEF12Q9NZN5 1544 aa12.46□□□□□ -0.42
C19orf53-204ENST00000588858 KDM5CP41229 1560 aa12.45□□□□□ -0.42
C19orf53-204ENST00000588858 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
C19orf53-204ENST00000588858 MAGI2Q86UL8 1455 aa12.45□□□□□ -0.42
C19orf53-204ENST00000588858 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
C19orf53-204ENST00000588858 KDM6BO15054 1643 aa12.44□□□□□ -0.42
C19orf53-204ENST00000588858 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
C19orf53-204ENST00000588858 RICTORQ6R327 1708 aa12.43□□□□□ -0.42
C19orf53-204ENST00000588858 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
C19orf53-204ENST00000588858 FRMPD1Q5SYB0 1578 aa12.43□□□□□ -0.42
C19orf53-204ENST00000588858 ZNF644Q9H582 1327 aaPredicted RBP12.42□□□□□ -0.42
C19orf53-204ENST00000588858 CCDC141Q6ZP82 1450 aa12.42□□□□□ -0.42
C19orf53-204ENST00000588858 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
C19orf53-204ENST00000588858 RTEL1-TNFRSF6BF6WH68 1400 aa12.42□□□□□ -0.42
C19orf53-204ENST00000588858 TRAPPC8Q9Y2L5 1435 aa12.42□□□□□ -0.42
C19orf53-204ENST00000588858 MAST1Q9Y2H9 1570 aa12.4□□□□□ -0.42
C19orf53-204ENST00000588858 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
C19orf53-204ENST00000588858 DNMT1P26358 1616 aaKnown RBP12.4□□□□□ -0.42
C19orf53-204ENST00000588858 ABCC5O15440 1437 aa12.38□□□□□ -0.43
C19orf53-204ENST00000588858 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
C19orf53-204ENST00000588858 PPARGC1BQ86YN6 1023 aaKnown RBP12.38□□□□□ -0.43
C19orf53-204ENST00000588858 DAPK1P53355 1430 aa12.37□□□□□ -0.43
C19orf53-204ENST00000588858 RAPGEF3O95398 923 aa12.37□□□□□ -0.43
C19orf53-204ENST00000588858 AFAP1Q8N556 730 aa12.37□□□□□ -0.43
C19orf53-204ENST00000588858 INO80Q9ULG1 1556 aaPredicted RBP12.37□□□□□ -0.43
C19orf53-204ENST00000588858 HECW2Q9P2P5 1572 aa12.36□□□□□ -0.43
C19orf53-204ENST00000588858 ADGRL2O95490 1459 aa12.36□□□□□ -0.43
C19orf53-204ENST00000588858 ZFYVE16Q7Z3T8 1539 aa12.36□□□□□ -0.43
C19orf53-204ENST00000588858 SPAG9O60271 1321 aaKnown RBP12.36□□□□□ -0.43
C19orf53-204ENST00000588858 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
C19orf53-204ENST00000588858 TSPY4P0CV99 314 aa12.35□□□□□ -0.43
C19orf53-204ENST00000588858 TSPY10P0CW01 314 aa12.35□□□□□ -0.43
C19orf53-204ENST00000588858 CROCC2H7BZ55 1655 aa12.35□□□□□ -0.43
C19orf53-204ENST00000588858 ROCK1Q13464 1354 aa12.34□□□□□ -0.43
C19orf53-204ENST00000588858 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
C19orf53-204ENST00000588858 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
C19orf53-204ENST00000588858 C9orf84Q5VXU9 1444 aa12.34□□□□□ -0.43
C19orf53-204ENST00000588858 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
C19orf53-204ENST00000588858 KIDINS220Q9ULH0 1771 aa12.33□□□□□ -0.44
C19orf53-204ENST00000588858 FAM50AQ14320 339 aaKnown RBP12.32□□□□□ -0.44
C19orf53-204ENST00000588858 ATP10AO60312 1499 aa12.32□□□□□ -0.44
C19orf53-204ENST00000588858 DIP2CQ9Y2E4 1556 aa12.31□□□□□ -0.44
C19orf53-204ENST00000588858 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
C19orf53-204ENST00000588858 NCOA1Q15788 1441 aa12.31□□□□□ -0.44
C19orf53-204ENST00000588858 YEATS2Q9ULM3 1422 aa12.31□□□□□ -0.44
C19orf53-204ENST00000588858 AGLP35573 1532 aa12.31□□□□□ -0.44
C19orf53-204ENST00000588858 ANKRD30AQ9BXX3 1397 aa12.3□□□□□ -0.44
C19orf53-204ENST00000588858 ABCA6Q8N139 1617 aa12.29□□□□□ -0.44
C19orf53-204ENST00000588858 DHX29Q7Z478 1369 aaKnown RBP12.29□□□□□ -0.44
C19orf53-204ENST00000588858 ADGBQ8N7X0 1667 aa12.28□□□□□ -0.44
C19orf53-204ENST00000588858 A2MP01023 1474 aa12.27□□□□□ -0.44
C19orf53-204ENST00000588858 DUOX2Q9NRD8 1548 aa12.27□□□□□ -0.44
C19orf53-204ENST00000588858 BCORL1Q5H9F3 1711 aa12.27□□□□□ -0.45
C19orf53-204ENST00000588858 ERBINQ96RT1 1412 aa12.27□□□□□ -0.45
C19orf53-204ENST00000588858 KIF15Q9NS87 1388 aa12.26□□□□□ -0.45
C19orf53-204ENST00000588858 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
C19orf53-204ENST00000588858 EIF2AK4Q9P2K8 1649 aaKnown RBP12.24□□□□□ -0.45
C19orf53-204ENST00000588858 FAM135AQ9P2D6 1515 aa12.23□□□□□ -0.45
C19orf53-204ENST00000588858 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
C19orf53-204ENST00000588858 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
C19orf53-204ENST00000588858 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
C19orf53-204ENST00000588858 NAIPQ13075 1403 aa12.22□□□□□ -0.45
C19orf53-204ENST00000588858 ANKRD50Q9ULJ7 1429 aa12.21□□□□□ -0.45
C19orf53-204ENST00000588858 CHIC2Q9UKJ5 165 aa12.21□□□□□ -0.45
C19orf53-204ENST00000588858 HRCP23327 699 aa12.2□□□□□ -0.46
C19orf53-204ENST00000588858 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
C19orf53-204ENST00000588858 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
C19orf53-204ENST00000588858 RNF17Q9BXT8 1623 aaKnown RBP12.19□□□□□ -0.46
C19orf53-204ENST00000588858 RRP7BPQ9NSQ0 103 aa12.19□□□□□ -0.46
C19orf53-204ENST00000588858 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
C19orf53-204ENST00000588858 SIGLEC1Q9BZZ2 1709 aa12.18□□□□□ -0.46
C19orf53-204ENST00000588858 DEPDC5O75140 1603 aa12.18□□□□□ -0.46
C19orf53-204ENST00000588858 ITGAEP38570 1179 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms