RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
APOC1-202ENST00000588750 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
APOC1-202ENST00000588750 ITSN2Q9NZM3 1697 aa12.75□□□□□ -0.37
APOC1-202ENST00000588750 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
APOC1-202ENST00000588750 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
APOC1-202ENST00000588750 CDC42BPAQ5VT25 1732 aa12.72□□□□□ -0.37
APOC1-202ENST00000588750 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
APOC1-202ENST00000588750 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
APOC1-202ENST00000588750 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.38
APOC1-202ENST00000588750 NCOA2Q15596 1464 aa12.71□□□□□ -0.38
APOC1-202ENST00000588750 CDC42BPBQ9Y5S2 1711 aa12.71□□□□□ -0.38
APOC1-202ENST00000588750 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
APOC1-202ENST00000588750 ZNF518AQ6AHZ1 1483 aa12.67□□□□□ -0.38
APOC1-202ENST00000588750 KANK4Q5T7N3 995 aaPredicted RBP12.67□□□□□ -0.38
APOC1-202ENST00000588750 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
APOC1-202ENST00000588750 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
APOC1-202ENST00000588750 MIA2Q96PC5 1412 aa12.66□□□□□ -0.38
APOC1-202ENST00000588750 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
APOC1-202ENST00000588750 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
APOC1-202ENST00000588750 COL17A1Q9UMD9 1497 aaPredicted RBP12.65□□□□□ -0.38
APOC1-202ENST00000588750 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
APOC1-202ENST00000588750 POGZQ7Z3K3 1410 aa12.65□□□□□ -0.38
APOC1-202ENST00000588750 RAPGEF3O95398 923 aa12.65□□□□□ -0.38
APOC1-202ENST00000588750 ABCC1P33527 1531 aa12.65□□□□□ -0.38
APOC1-202ENST00000588750 RICTORQ6R327 1708 aa12.64□□□□□ -0.39
APOC1-202ENST00000588750 ZMYM4Q5VZL5 1548 aa12.63□□□□□ -0.39
APOC1-202ENST00000588750 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
APOC1-202ENST00000588750 SAMD9LQ8IVG5 1584 aa12.62□□□□□ -0.39
APOC1-202ENST00000588750 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
APOC1-202ENST00000588750 SYCP2Q9BX26 1530 aa12.6□□□□□ -0.39
APOC1-202ENST00000588750 KDM5CP41229 1560 aa12.6□□□□□ -0.39
APOC1-202ENST00000588750 FRMPD1Q5SYB0 1578 aa12.6□□□□□ -0.39
APOC1-202ENST00000588750 CAMSAP2Q08AD1 1489 aa12.59□□□□□ -0.39
APOC1-202ENST00000588750 TSPY4P0CV99 314 aa12.59□□□□□ -0.39
APOC1-202ENST00000588750 TSPY10P0CW01 314 aa12.59□□□□□ -0.39
APOC1-202ENST00000588750 HECW2Q9P2P5 1572 aa12.59□□□□□ -0.39
APOC1-202ENST00000588750 MLH3Q9UHC1 1453 aa12.59□□□□□ -0.39
APOC1-202ENST00000588750 HNRNPMP52272 730 aaKnown RBP eCLIP12.58□□□□□ -0.4
APOC1-202ENST00000588750 AFAP1Q8N556 730 aa12.58□□□□□ -0.4
APOC1-202ENST00000588750 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
APOC1-202ENST00000588750 ARHGEF40Q8TER5 1519 aa12.57□□□□□ -0.4
APOC1-202ENST00000588750 FGD6Q6ZV73 1430 aa12.57□□□□□ -0.4
APOC1-202ENST00000588750 CCDC141Q6ZP82 1450 aa12.57□□□□□ -0.4
APOC1-202ENST00000588750 ARHGEF5Q12774 1597 aa12.56□□□□□ -0.4
APOC1-202ENST00000588750 TRAPPC8Q9Y2L5 1435 aa12.56□□□□□ -0.4
APOC1-202ENST00000588750 PTPN23Q9H3S7 1636 aa12.56□□□□□ -0.4
APOC1-202ENST00000588750 ARHGEF12Q9NZN5 1544 aa12.56□□□□□ -0.4
APOC1-202ENST00000588750 RTEL1-TNFRSF6BF6WH68 1400 aa12.55□□□□□ -0.4
APOC1-202ENST00000588750 ATP10AO60312 1499 aa12.55□□□□□ -0.4
APOC1-202ENST00000588750 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
APOC1-202ENST00000588750 MBD5Q9P267 1494 aa12.54□□□□□ -0.4
APOC1-202ENST00000588750 ARID4BQ4LE39 1312 aaPredicted RBP12.54□□□□□ -0.4
APOC1-202ENST00000588750 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
APOC1-202ENST00000588750 TCOF1Q13428 1488 aaKnown RBP12.53□□□□□ -0.4
APOC1-202ENST00000588750 ATP7AQ04656 1500 aa12.52□□□□□ -0.4
APOC1-202ENST00000588750 REREQ9P2R6 1566 aa12.52□□□□□ -0.41
APOC1-202ENST00000588750 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
APOC1-202ENST00000588750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.51□□□□□ -0.41
APOC1-202ENST00000588750 YEATS2Q9ULM3 1422 aa12.51□□□□□ -0.41
APOC1-202ENST00000588750 INO80Q9ULG1 1556 aaPredicted RBP12.51□□□□□ -0.41
APOC1-202ENST00000588750 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
APOC1-202ENST00000588750 KIDINS220Q9ULH0 1771 aa12.5□□□□□ -0.41
APOC1-202ENST00000588750 ADGBQ8N7X0 1667 aa12.49□□□□□ -0.41
APOC1-202ENST00000588750 DIP2CQ9Y2E4 1556 aa12.49□□□□□ -0.41
APOC1-202ENST00000588750 MAST1Q9Y2H9 1570 aa12.49□□□□□ -0.41
APOC1-202ENST00000588750 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
APOC1-202ENST00000588750 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
APOC1-202ENST00000588750 DAPK1P53355 1430 aa12.47□□□□□ -0.41
APOC1-202ENST00000588750 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
APOC1-202ENST00000588750 AGLP35573 1532 aa12.47□□□□□ -0.41
APOC1-202ENST00000588750 A2MP01023 1474 aa12.46□□□□□ -0.41
APOC1-202ENST00000588750 CROCC2H7BZ55 1655 aa12.46□□□□□ -0.41
APOC1-202ENST00000588750 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
APOC1-202ENST00000588750 ANKRD30AQ9BXX3 1397 aa12.45□□□□□ -0.42
APOC1-202ENST00000588750 PLXNC1O60486 1568 aa12.45□□□□□ -0.42
APOC1-202ENST00000588750 ABCC5O15440 1437 aa12.45□□□□□ -0.42
APOC1-202ENST00000588750 RRBP1Q9P2E9 1410 aaKnown RBP12.45□□□□□ -0.42
APOC1-202ENST00000588750 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
APOC1-202ENST00000588750 PPP6R1Q9UPN7 881 aa12.44□□□□□ -0.42
APOC1-202ENST00000588750 BCORL1Q5H9F3 1711 aa12.44□□□□□ -0.42
APOC1-202ENST00000588750 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
APOC1-202ENST00000588750 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
APOC1-202ENST00000588750 CNTLNQ9NXG0 1405 aa12.4□□□□□ -0.42
APOC1-202ENST00000588750 MLECQ14165 292 aa12.4□□□□□ -0.42
APOC1-202ENST00000588750 ADAMTSL3P82987 1691 aa12.4□□□□□ -0.42
APOC1-202ENST00000588750 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
APOC1-202ENST00000588750 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
APOC1-202ENST00000588750 ERBINQ96RT1 1412 aa12.39□□□□□ -0.43
APOC1-202ENST00000588750 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
APOC1-202ENST00000588750 KDM4FA0A1W2PPD8 638 aa12.39□□□□□ -0.43
APOC1-202ENST00000588750 ROCK1Q13464 1354 aa12.39□□□□□ -0.43
APOC1-202ENST00000588750 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
APOC1-202ENST00000588750 KIF3BO15066 747 aa12.38□□□□□ -0.43
APOC1-202ENST00000588750 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
APOC1-202ENST00000588750 CHIC2Q9UKJ5 165 aa12.38□□□□□ -0.43
APOC1-202ENST00000588750 FER1L4A9Z1Z3 1794 aa12.38□□□□□ -0.43
APOC1-202ENST00000588750 ITGAEP38570 1179 aa12.37□□□□□ -0.43
APOC1-202ENST00000588750 GGT6Q6P531 493 aa12.37□□□□□ -0.43
APOC1-202ENST00000588750 MADDQ8WXG6 1647 aa12.36□□□□□ -0.43
APOC1-202ENST00000588750 KANK1Q14678 1352 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms