RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PLCH2O75038 1416 aa34.53■■■■□ 3.12
ACTN4-210ENST00000588618 TCOF1Q13428 1488 aaKnown RBP34.52■■■■□ 3.12
ACTN4-210ENST00000588618 MAP3K4Q9Y6R4 1608 aa34.51■■■■□ 3.12
ACTN4-210ENST00000588618 ARHGAP5Q13017 1502 aa34.49■■■■□ 3.11
ACTN4-210ENST00000588618 CD109Q6YHK3 1445 aa34.49■■■■□ 3.11
ACTN4-210ENST00000588618 ZNF644Q9H582 1327 aaPredicted RBP34.49■■■■□ 3.11
ACTN4-210ENST00000588618 ARAP3Q8WWN8 1544 aa34.48■■■■□ 3.11
ACTN4-210ENST00000588618 SAMD9LQ8IVG5 1584 aa34.46■■■■□ 3.11
ACTN4-210ENST00000588618 FAM50AQ14320 339 aaKnown RBP34.46■■■■□ 3.11
ACTN4-210ENST00000588618 ZNF777Q9ULD5 760 aaPredicted RBP34.46■■■■□ 3.11
ACTN4-210ENST00000588618 CAMSAP2Q08AD1 1489 aa34.46■■■■□ 3.11
ACTN4-210ENST00000588618 PCGF6Q9BYE7 350 aa34.45■■■■□ 3.11
ACTN4-210ENST00000588618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.44■■■■□ 3.13e-6■■■□□ 14.7
ACTN4-210ENST00000588618 EFCAB2Q5VUJ9 269 aa34.41■■■■□ 3.1
ACTN4-210ENST00000588618 TRHP20396 242 aaPredicted RBP34.37■■■■□ 3.09
ACTN4-210ENST00000588618 FANCAO15360 1455 aa34.37■■■■□ 3.09
ACTN4-210ENST00000588618 PPRC1Q5VV67 1664 aaKnown RBP34.36■■■■□ 3.09
ACTN4-210ENST00000588618 TSPOAP1O95153 1857 aa34.36■■■■□ 3.09
ACTN4-210ENST00000588618 ABCC1P33527 1531 aa34.31■■■■□ 3.08
ACTN4-210ENST00000588618 DNMT1P26358 1616 aaKnown RBP34.31■■■■□ 3.08
ACTN4-210ENST00000588618 SYCP2Q9BX26 1530 aa34.3■■■■□ 3.08
ACTN4-210ENST00000588618 ARHGEF12Q9NZN5 1544 aa34.3■■■■□ 3.08
ACTN4-210ENST00000588618 PTPRKQ15262 1439 aa34.3■■■■□ 3.08
ACTN4-210ENST00000588618 ITGAEP38570 1179 aa34.3■■■■□ 3.08
ACTN4-210ENST00000588618 CFAP74Q9C0B2 1584 aa34.29■■■■□ 3.08
ACTN4-210ENST00000588618 MBD5Q9P267 1494 aa34.28■■■■□ 3.08
ACTN4-210ENST00000588618 PLEKHH2Q8IVE3 1493 aa34.27■■■■□ 3.08
ACTN4-210ENST00000588618 TEX14Q8IWB6 1497 aa34.25■■■■□ 3.07
ACTN4-210ENST00000588618 ABCC5O15440 1437 aa34.25■■■■□ 3.07
ACTN4-210ENST00000588618 DAPK1P53355 1430 aa34.24■■■■□ 3.07
ACTN4-210ENST00000588618 ARHGEF5Q12774 1597 aa34.24■■■■□ 3.07
ACTN4-210ENST00000588618 CROCC2H7BZ55 1655 aa34.24■■■■□ 3.07
ACTN4-210ENST00000588618 KIAA1107Q9UPP5 1409 aa34.24■■■■□ 3.07
ACTN4-210ENST00000588618 HNRNPMP52272 730 aaKnown RBP eCLIP34.24■■■■□ 3.075e-7■■■■□ 24.2
ACTN4-210ENST00000588618 AKNAQ7Z591 1439 aa34.23■■■■□ 3.07
ACTN4-210ENST00000588618 NEO1Q92859 1461 aa34.22■■■■□ 3.07
ACTN4-210ENST00000588618 ADGRL1O94910 1474 aa34.21■■■■□ 3.07
ACTN4-210ENST00000588618 RSPH4AQ5TD94 716 aa34.16■■■■□ 3.06
ACTN4-210ENST00000588618 TRAPPC8Q9Y2L5 1435 aa34.16■■■■□ 3.06
ACTN4-210ENST00000588618 CCDC141Q6ZP82 1450 aa34.16■■■■□ 3.06
ACTN4-210ENST00000588618 SCAPERQ9BY12 1400 aa34.14■■■■□ 3.06
ACTN4-210ENST00000588618 TSPY4P0CV99 314 aa34.1■■■■□ 3.05
ACTN4-210ENST00000588618 TSPY10P0CW01 314 aa34.1■■■■□ 3.05
ACTN4-210ENST00000588618 SHANK2Q9UPX8 1470 aa34.09■■■■□ 3.05
ACTN4-210ENST00000588618 CHIC2Q9UKJ5 165 aa34.09■■■■□ 3.05
ACTN4-210ENST00000588618 ADGBQ8N7X0 1667 aa34.07■■■■□ 3.04
ACTN4-210ENST00000588618 C9orf84Q5VXU9 1444 aa34.05■■■■□ 3.04
ACTN4-210ENST00000588618 MAST1Q9Y2H9 1570 aa34.04■■■■□ 3.04
ACTN4-210ENST00000588618 AFAP1Q8N556 730 aa34.04■■■■□ 3.04
ACTN4-210ENST00000588618 POGZQ7Z3K3 1410 aa34.03■■■■□ 3.04
ACTN4-210ENST00000588618 RICTORQ6R327 1708 aa34.03■■■■□ 3.04
ACTN4-210ENST00000588618 DENND4BO75064 1496 aaPredicted RBP34.02■■■■□ 3.04
ACTN4-210ENST00000588618 ADGRL2O95490 1459 aa34.02■■■■□ 3.04
ACTN4-210ENST00000588618 ZNF518AQ6AHZ1 1483 aa34■■■■□ 3.03
ACTN4-210ENST00000588618 KDM5CP41229 1560 aa33.99■■■■□ 3.03
ACTN4-210ENST00000588618 FRMPD1Q5SYB0 1578 aa33.99■■■■□ 3.03
ACTN4-210ENST00000588618 ROCK1Q13464 1354 aa33.98■■■■□ 3.03
ACTN4-210ENST00000588618 NCOA1Q15788 1441 aa33.97■■■■□ 3.03
ACTN4-210ENST00000588618 ZFYVE16Q7Z3T8 1539 aa33.96■■■■□ 3.03
ACTN4-210ENST00000588618 INO80Q9ULG1 1556 aaPredicted RBP33.96■■■■□ 3.03
ACTN4-210ENST00000588618 GCC2Q8IWJ2 1684 aa33.96■■■■□ 3.03
ACTN4-210ENST00000588618 HFM1A2PYH4 1435 aa33.96■■■■□ 3.03
ACTN4-210ENST00000588618 NAIPQ13075 1403 aa33.96■■■■□ 3.03
ACTN4-210ENST00000588618 COL17A1Q9UMD9 1497 aaPredicted RBP33.96■■■■□ 3.03
ACTN4-210ENST00000588618 RRP7BPQ9NSQ0 103 aa33.96■■■■□ 3.03
ACTN4-210ENST00000588618 MYT1LQ9UL68 1186 aa33.96■■■■□ 3.03
ACTN4-210ENST00000588618 RAPGEF3O95398 923 aa33.95■■■■□ 3.03
ACTN4-210ENST00000588618 SPAG9O60271 1321 aaKnown RBP33.95■■■■□ 3.02
ACTN4-210ENST00000588618 KIDINS220Q9ULH0 1771 aa33.92■■■■□ 3.02
ACTN4-210ENST00000588618 ANKRD30AQ9BXX3 1397 aa33.91■■■■□ 3.02
ACTN4-210ENST00000588618 PLXNC1O60486 1568 aa33.91■■■■□ 3.02
ACTN4-210ENST00000588618 ATP7AQ04656 1500 aa33.9■■■■□ 3.02
ACTN4-210ENST00000588618 SETD5Q9C0A6 1442 aa33.89■■■■□ 3.02
ACTN4-210ENST00000588618 KDM6BO15054 1643 aa33.89■■■■□ 3.02
ACTN4-210ENST00000588618 RTEL1-TNFRSF6BF6WH68 1400 aa33.88■■■■□ 3.01
ACTN4-210ENST00000588618 HECW2Q9P2P5 1572 aa33.87■■■■□ 3.01
ACTN4-210ENST00000588618 RAB3GAP2Q9H2M9 1393 aa33.84■■■■□ 3.01
ACTN4-210ENST00000588618 MLH3Q9UHC1 1453 aa33.84■■■■□ 3.01
ACTN4-210ENST00000588618 KIF15Q9NS87 1388 aa33.84■■■■□ 3.01
ACTN4-210ENST00000588618 ZMYM4Q5VZL5 1548 aa33.83■■■■□ 3.01
ACTN4-210ENST00000588618 ABCA6Q8N139 1617 aa33.79■■■■□ 3
ACTN4-210ENST00000588618 ANKRD50Q9ULJ7 1429 aa33.73■■■□□ 2.99
ACTN4-210ENST00000588618 YEATS2Q9ULM3 1422 aa33.73■■■□□ 2.99
ACTN4-210ENST00000588618 DIP2CQ9Y2E4 1556 aa33.73■■■□□ 2.99
ACTN4-210ENST00000588618 DUOX2Q9NRD8 1548 aa33.73■■■□□ 2.99
ACTN4-210ENST00000588618 MAGI2Q86UL8 1455 aa33.72■■■□□ 2.99
ACTN4-210ENST00000588618 HRCP23327 699 aa33.65■■■□□ 2.98
ACTN4-210ENST00000588618 ERBINQ96RT1 1412 aa33.64■■■□□ 2.97
ACTN4-210ENST00000588618 A2MP01023 1474 aa33.62■■■□□ 2.97
ACTN4-210ENST00000588618 ARHGEF40Q8TER5 1519 aa33.61■■■□□ 2.97
ACTN4-210ENST00000588618 DHX29Q7Z478 1369 aaKnown RBP33.61■■■□□ 2.97
ACTN4-210ENST00000588618 EIF2AK4Q9P2K8 1649 aaKnown RBP33.57■■■□□ 2.96
ACTN4-210ENST00000588618 ACIN1Q9UKV3 1341 aaKnown RBP33.56■■■□□ 2.96
ACTN4-210ENST00000588618 SIGLEC1Q9BZZ2 1709 aa33.55■■■□□ 2.96
ACTN4-210ENST00000588618 UNC13BO14795 1591 aa33.54■■■□□ 2.96
ACTN4-210ENST00000588618 ATP10AO60312 1499 aa33.54■■■□□ 2.96
ACTN4-210ENST00000588618 DHX57Q6P158 1386 aaKnown RBP33.51■■■□□ 2.96
ACTN4-210ENST00000588618 REREQ9P2R6 1566 aa33.51■■■□□ 2.96
ACTN4-210ENST00000588618 DEPDC5O75140 1603 aa33.51■■■□□ 2.95
ACTN4-210ENST00000588618 BCORL1Q5H9F3 1711 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 949.5 ms