RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 ARHGAP5Q13017 1502 aa32.11■■■□□ 2.73
TRAPPC6A-203ENST00000587818 CDC42BPBQ9Y5S2 1711 aa32.06■■■□□ 2.72
TRAPPC6A-203ENST00000587818 AFAP1Q8N556 730 aa32.05■■■□□ 2.72
TRAPPC6A-203ENST00000587818 YEATS2Q9ULM3 1422 aa32.05■■■□□ 2.72
TRAPPC6A-203ENST00000587818 POGZQ7Z3K3 1410 aa32.04■■■□□ 2.72
TRAPPC6A-203ENST00000587818 ZNF777Q9ULD5 760 aaPredicted RBP32.01■■■□□ 2.71
TRAPPC6A-203ENST00000587818 ZMYM4Q5VZL5 1548 aa32■■■□□ 2.71
TRAPPC6A-203ENST00000587818 ARHGEF40Q8TER5 1519 aa31.99■■■□□ 2.71
TRAPPC6A-203ENST00000587818 MTUS2Q5JR59 1369 aa31.98■■■□□ 2.71
TRAPPC6A-203ENST00000587818 MYT1LQ9UL68 1186 aa31.98■■■□□ 2.71
TRAPPC6A-203ENST00000587818 ZFYVE16Q7Z3T8 1539 aa31.98■■■□□ 2.71
TRAPPC6A-203ENST00000587818 CDC42BPAQ5VT25 1732 aa31.97■■■□□ 2.71
TRAPPC6A-203ENST00000587818 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
TRAPPC6A-203ENST00000587818 MAGI2Q86UL8 1455 aa31.95■■■□□ 2.7
TRAPPC6A-203ENST00000587818 MLECQ14165 292 aa31.93■■■□□ 2.7
TRAPPC6A-203ENST00000587818 GPATCH8Q9UKJ3 1502 aaKnown RBP31.93■■■□□ 2.7
TRAPPC6A-203ENST00000587818 ADAMTSL3P82987 1691 aa31.92■■■□□ 2.7
TRAPPC6A-203ENST00000587818 ARHGEF12Q9NZN5 1544 aa31.92■■■□□ 2.7
TRAPPC6A-203ENST00000587818 BCORL1Q5H9F3 1711 aa31.92■■■□□ 2.7
TRAPPC6A-203ENST00000587818 TRAPPC8Q9Y2L5 1435 aa31.91■■■□□ 2.7
TRAPPC6A-203ENST00000587818 SIGLEC1Q9BZZ2 1709 aa31.89■■■□□ 2.7
TRAPPC6A-203ENST00000587818 CCNB3Q8WWL7 1395 aa31.89■■■□□ 2.7
TRAPPC6A-203ENST00000587818 ZNF518AQ6AHZ1 1483 aa31.89■■■□□ 2.7
TRAPPC6A-203ENST00000587818 CFDP1Q9UEE9 299 aaPredicted RBP31.88■■■□□ 2.69
TRAPPC6A-203ENST00000587818 HNRNPMP52272 730 aaKnown RBP eCLIP31.87■■■□□ 2.69
TRAPPC6A-203ENST00000587818 ATP10AO60312 1499 aa31.86■■■□□ 2.69
TRAPPC6A-203ENST00000587818 ABCC1P33527 1531 aa31.85■■■□□ 2.69
TRAPPC6A-203ENST00000587818 PTPRMP28827 1452 aa31.84■■■□□ 2.69
TRAPPC6A-203ENST00000587818 MADDQ8WXG6 1647 aa31.83■■■□□ 2.69
TRAPPC6A-203ENST00000587818 PLPPR3Q6T4P5 718 aa31.83■■■□□ 2.69
TRAPPC6A-203ENST00000587818 VPS8Q8N3P4 1428 aa31.82■■■□□ 2.68
TRAPPC6A-203ENST00000587818 KDM5CP41229 1560 aa31.81■■■□□ 2.68
TRAPPC6A-203ENST00000587818 ITSN2Q9NZM3 1697 aa31.81■■■□□ 2.68
TRAPPC6A-203ENST00000587818 SAMD9LQ8IVG5 1584 aa31.81■■■□□ 2.68
TRAPPC6A-203ENST00000587818 EHBP1L1Q8N3D4 1523 aa31.79■■■□□ 2.68
TRAPPC6A-203ENST00000587818 ZNF644Q9H582 1327 aaPredicted RBP31.78■■■□□ 2.68
TRAPPC6A-203ENST00000587818 C9orf84Q5VXU9 1444 aa31.78■■■□□ 2.68
TRAPPC6A-203ENST00000587818 MLH3Q9UHC1 1453 aa31.75■■■□□ 2.67
TRAPPC6A-203ENST00000587818 HECW2Q9P2P5 1572 aa31.75■■■□□ 2.67
TRAPPC6A-203ENST00000587818 RIMS1Q86UR5 1692 aaKnown RBP31.75■■■□□ 2.67
TRAPPC6A-203ENST00000587818 SYCP2Q9BX26 1530 aa31.73■■■□□ 2.67
TRAPPC6A-203ENST00000587818 TIAM1Q13009 1591 aa31.73■■■□□ 2.67
TRAPPC6A-203ENST00000587818 DIP2CQ9Y2E4 1556 aa31.72■■■□□ 2.67
TRAPPC6A-203ENST00000587818 KANK4Q5T7N3 995 aaPredicted RBP31.71■■■□□ 2.67
TRAPPC6A-203ENST00000587818 SPAG9O60271 1321 aaKnown RBP31.7■■■□□ 2.66
TRAPPC6A-203ENST00000587818 ABCA6Q8N139 1617 aa31.69■■■□□ 2.66
TRAPPC6A-203ENST00000587818 NCOA2Q15596 1464 aa31.68■■■□□ 2.66
TRAPPC6A-203ENST00000587818 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
TRAPPC6A-203ENST00000587818 KIAA1107Q9UPP5 1409 aa31.66■■■□□ 2.66
TRAPPC6A-203ENST00000587818 PLEKHH2Q8IVE3 1493 aa31.65■■■□□ 2.66
TRAPPC6A-203ENST00000587818 SUPT6HQ7KZ85 1726 aaKnown RBP31.64■■■□□ 2.66
TRAPPC6A-203ENST00000587818 LRRC9Q6ZRR7 1453 aa31.63■■■□□ 2.65
TRAPPC6A-203ENST00000587818 FER1L4A9Z1Z3 1794 aa31.61■■■□□ 2.65
TRAPPC6A-203ENST00000587818 CEBPAP49715 358 aaPredicted RBP31.61■■■□□ 2.65
TRAPPC6A-203ENST00000587818 REREQ9P2R6 1566 aa31.56■■■□□ 2.64
TRAPPC6A-203ENST00000587818 MBD5Q9P267 1494 aa31.55■■■□□ 2.64
TRAPPC6A-203ENST00000587818 APLP2Q06481 763 aa31.54■■■□□ 2.64
TRAPPC6A-203ENST00000587818 ATP7AQ04656 1500 aa31.53■■■□□ 2.64
TRAPPC6A-203ENST00000587818 MAP3K1Q13233 1512 aa31.52■■■□□ 2.64
TRAPPC6A-203ENST00000587818 AGLP35573 1532 aa31.51■■■□□ 2.63
TRAPPC6A-203ENST00000587818 CAMSAP2Q08AD1 1489 aa31.49■■■□□ 2.63
TRAPPC6A-203ENST00000587818 ESF1Q9H501 851 aaKnown RBP31.49■■■□□ 2.63
TRAPPC6A-203ENST00000587818 INO80Q9ULG1 1556 aaPredicted RBP31.47■■■□□ 2.63
TRAPPC6A-203ENST00000587818 HSPA2P54652 639 aa31.46■■■□□ 2.63
TRAPPC6A-203ENST00000587818 LMTK3Q96Q04 1460 aa31.45■■■□□ 2.62
TRAPPC6A-203ENST00000587818 A2MP01023 1474 aa31.44■■■□□ 2.62
TRAPPC6A-203ENST00000587818 RSPH4AQ5TD94 716 aa31.41■■■□□ 2.62
TRAPPC6A-203ENST00000587818 GGT6Q6P531 493 aa31.41■■■□□ 2.62
TRAPPC6A-203ENST00000587818 CCDC141Q6ZP82 1450 aa31.39■■■□□ 2.62
TRAPPC6A-203ENST00000587818 RTEL1-TNFRSF6BF6WH68 1400 aa31.38■■■□□ 2.61
TRAPPC6A-203ENST00000587818 TSPY4P0CV99 314 aa31.37■■■□□ 2.61
TRAPPC6A-203ENST00000587818 TSPY10P0CW01 314 aa31.37■■■□□ 2.61
TRAPPC6A-203ENST00000587818 MYOM3Q5VTT5 1437 aa31.36■■■□□ 2.61
TRAPPC6A-203ENST00000587818 ADGBQ8N7X0 1667 aa31.33■■■□□ 2.61
TRAPPC6A-203ENST00000587818 PLXNC1O60486 1568 aa31.33■■■□□ 2.61
TRAPPC6A-203ENST00000587818 DHX29Q7Z478 1369 aaKnown RBP31.32■■■□□ 2.6
TRAPPC6A-203ENST00000587818 C3P01024 1663 aa31.32■■■□□ 2.6
TRAPPC6A-203ENST00000587818 MIA2Q96PC5 1412 aa31.3■■■□□ 2.6
TRAPPC6A-203ENST00000587818 ARHGEF5Q12774 1597 aa31.3■■■□□ 2.6
TRAPPC6A-203ENST00000587818 KIF3BO15066 747 aa31.29■■■□□ 2.6
TRAPPC6A-203ENST00000587818 ZMYM3Q14202 1370 aa31.28■■■□□ 2.6
TRAPPC6A-203ENST00000587818 SETD1BQ9UPS6 1966 aaKnown RBP31.27■■■□□ 2.6
TRAPPC6A-203ENST00000587818 CNTLNQ9NXG0 1405 aa31.27■■■□□ 2.6
TRAPPC6A-203ENST00000587818 CLTCQ00610 1675 aaKnown RBP31.23■■■□□ 2.59
TRAPPC6A-203ENST00000587818 PREX1Q8TCU6 1659 aa31.23■■■□□ 2.59
TRAPPC6A-203ENST00000587818 UHRF1BP1Q6BDS2 1440 aa31.19■■■□□ 2.58
TRAPPC6A-203ENST00000587818 PPP6R1Q9UPN7 881 aa31.18■■■□□ 2.58
TRAPPC6A-203ENST00000587818 PTPN23Q9H3S7 1636 aa31.16■■■□□ 2.58
TRAPPC6A-203ENST00000587818 MROH2AA6NES4 1674 aa31.16■■■□□ 2.58
TRAPPC6A-203ENST00000587818 FGD6Q6ZV73 1430 aa31.14■■■□□ 2.58
TRAPPC6A-203ENST00000587818 ILDR1Q86SU0 546 aaPredicted RBP31.13■■■□□ 2.57
TRAPPC6A-203ENST00000587818 ABCC5O15440 1437 aa31.13■■■□□ 2.57
TRAPPC6A-203ENST00000587818 MAST1Q9Y2H9 1570 aa31.13■■■□□ 2.57
TRAPPC6A-203ENST00000587818 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
TRAPPC6A-203ENST00000587818 WASHC2CQ9Y4E1 1318 aa31.1■■■□□ 2.57
TRAPPC6A-203ENST00000587818 RRP7BPQ9NSQ0 103 aa31.1■■■□□ 2.57
TRAPPC6A-203ENST00000587818 CHIC2Q9UKJ5 165 aa31.1■■■□□ 2.57
TRAPPC6A-203ENST00000587818 PTPRKQ15262 1439 aa31.08■■■□□ 2.57
TRAPPC6A-203ENST00000587818 NPATQ14207 1427 aa31.07■■■□□ 2.57
TRAPPC6A-203ENST00000587818 FBXO31Q5XUX0 539 aaPredicted RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms