RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 ARHGAP5Q13017 1502 aa27.95■■■□□ 2.06
RETREG3-205ENST00000586870 LRRC9Q6ZRR7 1453 aa27.94■■■□□ 2.06
RETREG3-205ENST00000586870 COL17A1Q9UMD9 1497 aaPredicted RBP27.94■■■□□ 2.06
RETREG3-205ENST00000586870 ZNF777Q9ULD5 760 aaPredicted RBP27.94■■■□□ 2.06
RETREG3-205ENST00000586870 CFDP1Q9UEE9 299 aaPredicted RBP27.93■■■□□ 2.06
RETREG3-205ENST00000586870 RAPGEF3O95398 923 aa27.91■■■□□ 2.06
RETREG3-205ENST00000586870 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
RETREG3-205ENST00000586870 ARAP3Q8WWN8 1544 aa27.91■■■□□ 2.06
RETREG3-205ENST00000586870 CFAP74Q9C0B2 1584 aa27.89■■■□□ 2.06
RETREG3-205ENST00000586870 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
RETREG3-205ENST00000586870 NCOA2Q15596 1464 aa27.87■■■□□ 2.05
RETREG3-205ENST00000586870 SCAPERQ9BY12 1400 aa27.86■■■□□ 2.05
RETREG3-205ENST00000586870 DENND4BO75064 1496 aaPredicted RBP27.86■■■□□ 2.05
RETREG3-205ENST00000586870 ADGRL1O94910 1474 aa27.86■■■□□ 2.05
RETREG3-205ENST00000586870 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
RETREG3-205ENST00000586870 CCER1Q8TC90 406 aaPredicted RBP27.81■■■□□ 2.04
RETREG3-205ENST00000586870 PREX2Q70Z35 1606 aa27.8■■■□□ 2.04
RETREG3-205ENST00000586870 RRBP1Q9P2E9 1410 aaKnown RBP27.79■■■□□ 2.04
RETREG3-205ENST00000586870 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
RETREG3-205ENST00000586870 CDC42BPBQ9Y5S2 1711 aa27.76■■■□□ 2.03
RETREG3-205ENST00000586870 CDC42BPAQ5VT25 1732 aa27.76■■■□□ 2.03
RETREG3-205ENST00000586870 HNRNPMP52272 730 aaKnown RBP eCLIP27.74■■■□□ 2.03
RETREG3-205ENST00000586870 AFAP1Q8N556 730 aa27.74■■■□□ 2.03
RETREG3-205ENST00000586870 ZNF644Q9H582 1327 aaPredicted RBP27.72■■■□□ 2.03
RETREG3-205ENST00000586870 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
RETREG3-205ENST00000586870 PLEKHH2Q8IVE3 1493 aa27.71■■■□□ 2.03
RETREG3-205ENST00000586870 ITSN2Q9NZM3 1697 aa27.69■■■□□ 2.02
RETREG3-205ENST00000586870 ZNF518AQ6AHZ1 1483 aa27.68■■■□□ 2.02
RETREG3-205ENST00000586870 MYOM3Q5VTT5 1437 aa27.67■■■□□ 2.02
RETREG3-205ENST00000586870 KIAA1107Q9UPP5 1409 aa27.66■■■□□ 2.02
RETREG3-205ENST00000586870 ABCC1P33527 1531 aa27.66■■■□□ 2.02
RETREG3-205ENST00000586870 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
RETREG3-205ENST00000586870 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
RETREG3-205ENST00000586870 TRAPPC8Q9Y2L5 1435 aa27.65■■■□□ 2.02
RETREG3-205ENST00000586870 ARHGEF12Q9NZN5 1544 aa27.64■■■□□ 2.02
RETREG3-205ENST00000586870 FRMPD1Q5SYB0 1578 aa27.64■■■□□ 2.01
RETREG3-205ENST00000586870 MIA2Q96PC5 1412 aa27.62■■■□□ 2.01
RETREG3-205ENST00000586870 SYCP2Q9BX26 1530 aa27.62■■■□□ 2.01
RETREG3-205ENST00000586870 RSPH4AQ5TD94 716 aa27.61■■■□□ 2.01
RETREG3-205ENST00000586870 RICTORQ6R327 1708 aa27.61■■■□□ 2.01
RETREG3-205ENST00000586870 MAGI2Q86UL8 1455 aa27.6■■■□□ 2.01
RETREG3-205ENST00000586870 SPAG9O60271 1321 aaKnown RBP27.6■■■□□ 2.01
RETREG3-205ENST00000586870 ARID4BQ4LE39 1312 aaPredicted RBP27.59■■■□□ 2.01
RETREG3-205ENST00000586870 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
RETREG3-205ENST00000586870 ZMYM4Q5VZL5 1548 aa27.57■■■□□ 2
RETREG3-205ENST00000586870 ZFYVE16Q7Z3T8 1539 aa27.56■■■□□ 2
RETREG3-205ENST00000586870 TSPY4P0CV99 314 aa27.56■■■□□ 2
RETREG3-205ENST00000586870 TSPY10P0CW01 314 aa27.56■■■□□ 2
RETREG3-205ENST00000586870 YEATS2Q9ULM3 1422 aa27.55■■■□□ 2
RETREG3-205ENST00000586870 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
RETREG3-205ENST00000586870 MBD5Q9P267 1494 aa27.52■■■□□ 2
RETREG3-205ENST00000586870 FAM50AQ14320 339 aaKnown RBP27.52■■■□□ 2
RETREG3-205ENST00000586870 MLH3Q9UHC1 1453 aa27.52■■■□□ 2
RETREG3-205ENST00000586870 KDM5CP41229 1560 aa27.52■■■□□ 2
RETREG3-205ENST00000586870 ATP10AO60312 1499 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 ARHGEF40Q8TER5 1519 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 HECW2Q9P2P5 1572 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
RETREG3-205ENST00000586870 KDM4FA0A1W2PPD8 638 aa27.45■■□□□ 1.98
RETREG3-205ENST00000586870 PTPN23Q9H3S7 1636 aa27.44■■□□□ 1.98
RETREG3-205ENST00000586870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.44■■□□□ 1.98
RETREG3-205ENST00000586870 C9orf84Q5VXU9 1444 aa27.44■■□□□ 1.98
RETREG3-205ENST00000586870 MLECQ14165 292 aa27.41■■□□□ 1.98
RETREG3-205ENST00000586870 RTEL1-TNFRSF6BF6WH68 1400 aa27.4■■□□□ 1.98
RETREG3-205ENST00000586870 ARHGEF5Q12774 1597 aa27.39■■□□□ 1.98
RETREG3-205ENST00000586870 ATP7AQ04656 1500 aa27.39■■□□□ 1.98
RETREG3-205ENST00000586870 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.98
RETREG3-205ENST00000586870 DIP2CQ9Y2E4 1556 aa27.36■■□□□ 1.97
RETREG3-205ENST00000586870 KIDINS220Q9ULH0 1771 aa27.35■■□□□ 1.97
RETREG3-205ENST00000586870 ABCC5O15440 1437 aa27.34■■□□□ 1.97
RETREG3-205ENST00000586870 CHIC2Q9UKJ5 165 aa27.34■■□□□ 1.97
RETREG3-205ENST00000586870 ABCA6Q8N139 1617 aa27.33■■□□□ 1.97
RETREG3-205ENST00000586870 CLSPNQ9HAW4 1339 aa27.33■■□□□ 1.97
RETREG3-205ENST00000586870 DAPK1P53355 1430 aa27.32■■□□□ 1.96
RETREG3-205ENST00000586870 INO80Q9ULG1 1556 aaPredicted RBP27.32■■□□□ 1.96
RETREG3-205ENST00000586870 ITGAEP38570 1179 aa27.31■■□□□ 1.96
RETREG3-205ENST00000586870 A2MP01023 1474 aa27.31■■□□□ 1.96
RETREG3-205ENST00000586870 DHX57Q6P158 1386 aaKnown RBP27.28■■□□□ 1.96
RETREG3-205ENST00000586870 ESF1Q9H501 851 aaKnown RBP27.28■■□□□ 1.96
RETREG3-205ENST00000586870 RRP7BPQ9NSQ0 103 aa27.27■■□□□ 1.96
RETREG3-205ENST00000586870 DHX29Q7Z478 1369 aaKnown RBP27.27■■□□□ 1.96
RETREG3-205ENST00000586870 REREQ9P2R6 1566 aa27.25■■□□□ 1.95
RETREG3-205ENST00000586870 SETD5Q9C0A6 1442 aa27.24■■□□□ 1.95
RETREG3-205ENST00000586870 DNMT1P26358 1616 aaKnown RBP27.24■■□□□ 1.95
RETREG3-205ENST00000586870 GGT6Q6P531 493 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 ANKRD30AQ9BXX3 1397 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 SHANK2Q9UPX8 1470 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 KIF3BO15066 747 aa27.23■■□□□ 1.95
RETREG3-205ENST00000586870 MAST1Q9Y2H9 1570 aa27.22■■□□□ 1.95
RETREG3-205ENST00000586870 AGLP35573 1532 aa27.22■■□□□ 1.95
RETREG3-205ENST00000586870 RAB3GAP2Q9H2M9 1393 aa27.2■■□□□ 1.94
RETREG3-205ENST00000586870 BCORL1Q5H9F3 1711 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 KIF15Q9NS87 1388 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 ADGBQ8N7X0 1667 aa27.19■■□□□ 1.94
RETREG3-205ENST00000586870 SIGLEC1Q9BZZ2 1709 aa27.18■■□□□ 1.94
RETREG3-205ENST00000586870 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
RETREG3-205ENST00000586870 NCOA1Q15788 1441 aa27.13■■□□□ 1.93
RETREG3-205ENST00000586870 ADAMTSL3P82987 1691 aa27.13■■□□□ 1.93
RETREG3-205ENST00000586870 CROCC2H7BZ55 1655 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms