RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 ZNF777Q9ULD5 760 aaPredicted RBP32.58■■■□□ 2.81
PPP4R1-221ENST00000582240 ADGRL1O94910 1474 aa32.57■■■□□ 2.8
PPP4R1-221ENST00000582240 CCNB3Q8WWL7 1395 aa32.57■■■□□ 2.8
PPP4R1-221ENST00000582240 GPATCH8Q9UKJ3 1502 aaKnown RBP32.56■■■□□ 2.8
PPP4R1-221ENST00000582240 CDC42BPBQ9Y5S2 1711 aa32.56■■■□□ 2.8
PPP4R1-221ENST00000582240 APLP2Q06481 763 aa32.55■■■□□ 2.8
PPP4R1-221ENST00000582240 LRRC9Q6ZRR7 1453 aa32.54■■■□□ 2.8
PPP4R1-221ENST00000582240 FRMPD1Q5SYB0 1578 aa32.53■■■□□ 2.8
PPP4R1-221ENST00000582240 PREX2Q70Z35 1606 aa32.53■■■□□ 2.8
PPP4R1-221ENST00000582240 CDC42BPAQ5VT25 1732 aa32.53■■■□□ 2.8
PPP4R1-221ENST00000582240 CFDP1Q9UEE9 299 aaPredicted RBP32.5■■■□□ 2.79
PPP4R1-221ENST00000582240 NCOA2Q15596 1464 aa32.48■■■□□ 2.79
PPP4R1-221ENST00000582240 MAP3K1Q13233 1512 aa32.48■■■□□ 2.79
PPP4R1-221ENST00000582240 AFAP1Q8N556 730 aa32.46■■■□□ 2.79
PPP4R1-221ENST00000582240 RICTORQ6R327 1708 aa32.45■■■□□ 2.78
PPP4R1-221ENST00000582240 ARHGEF12Q9NZN5 1544 aa32.44■■■□□ 2.78
PPP4R1-221ENST00000582240 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
PPP4R1-221ENST00000582240 ZNF644Q9H582 1327 aaPredicted RBP32.43■■■□□ 2.78
PPP4R1-221ENST00000582240 SUPT6HQ7KZ85 1726 aaKnown RBP32.43■■■□□ 2.78
PPP4R1-221ENST00000582240 HNRNPMP52272 730 aaKnown RBP eCLIP32.42■■■□□ 2.784e-6■■■■□ 23.6
PPP4R1-221ENST00000582240 TRAPPC8Q9Y2L5 1435 aa32.4■■■□□ 2.78
PPP4R1-221ENST00000582240 SAMD9LQ8IVG5 1584 aa32.39■■■□□ 2.78
PPP4R1-221ENST00000582240 ABCC1P33527 1531 aa32.37■■■□□ 2.77
PPP4R1-221ENST00000582240 YEATS2Q9ULM3 1422 aa32.36■■■□□ 2.77
PPP4R1-221ENST00000582240 KDM4FA0A1W2PPD8 638 aa32.36■■■□□ 2.77
PPP4R1-221ENST00000582240 MYT1LQ9UL68 1186 aa32.36■■■□□ 2.77
PPP4R1-221ENST00000582240 ZMYM4Q5VZL5 1548 aa32.31■■■□□ 2.76
PPP4R1-221ENST00000582240 ZNF518AQ6AHZ1 1483 aa32.31■■■□□ 2.76
PPP4R1-221ENST00000582240 SYCP2Q9BX26 1530 aa32.31■■■□□ 2.76
PPP4R1-221ENST00000582240 ITSN2Q9NZM3 1697 aa32.3■■■□□ 2.76
PPP4R1-221ENST00000582240 ZFYVE16Q7Z3T8 1539 aa32.28■■■□□ 2.76
PPP4R1-221ENST00000582240 PPARGC1BQ86YN6 1023 aaKnown RBP32.28■■■□□ 2.76
PPP4R1-221ENST00000582240 ARID4BQ4LE39 1312 aaPredicted RBP32.26■■■□□ 2.76
PPP4R1-221ENST00000582240 ARHGEF40Q8TER5 1519 aa32.26■■■□□ 2.75
PPP4R1-221ENST00000582240 AEBP2Q6ZN18 517 aaPredicted RBP32.25■■■□□ 2.75
PPP4R1-221ENST00000582240 KIAA1107Q9UPP5 1409 aa32.25■■■□□ 2.75
PPP4R1-221ENST00000582240 MAGI2Q86UL8 1455 aa32.24■■■□□ 2.75
PPP4R1-221ENST00000582240 KDM5CP41229 1560 aa32.24■■■□□ 2.75
PPP4R1-221ENST00000582240 PLEKHH2Q8IVE3 1493 aa32.23■■■□□ 2.75
PPP4R1-221ENST00000582240 MYOM3Q5VTT5 1437 aa32.2■■■□□ 2.75
PPP4R1-221ENST00000582240 CAMSAP2Q08AD1 1489 aa32.2■■■□□ 2.75
PPP4R1-221ENST00000582240 SPAG9O60271 1321 aaKnown RBP32.19■■■□□ 2.74
PPP4R1-221ENST00000582240 MBD5Q9P267 1494 aa32.18■■■□□ 2.74
PPP4R1-221ENST00000582240 ATP10AO60312 1499 aa32.16■■■□□ 2.74
PPP4R1-221ENST00000582240 MLH3Q9UHC1 1453 aa32.16■■■□□ 2.74
PPP4R1-221ENST00000582240 HECW2Q9P2P5 1572 aa32.16■■■□□ 2.74
PPP4R1-221ENST00000582240 MLECQ14165 292 aa32.14■■■□□ 2.74
PPP4R1-221ENST00000582240 SIGLEC1Q9BZZ2 1709 aa32.12■■■□□ 2.73
PPP4R1-221ENST00000582240 MIA2Q96PC5 1412 aa32.1■■■□□ 2.73
PPP4R1-221ENST00000582240 DIP2CQ9Y2E4 1556 aa32.1■■■□□ 2.73
PPP4R1-221ENST00000582240 C9orf84Q5VXU9 1444 aa32.09■■■□□ 2.73
PPP4R1-221ENST00000582240 KIDINS220Q9ULH0 1771 aa32.09■■■□□ 2.73
PPP4R1-221ENST00000582240 ABCA6Q8N139 1617 aa32.09■■■□□ 2.73
PPP4R1-221ENST00000582240 CCDC141Q6ZP82 1450 aa32.03■■■□□ 2.72
PPP4R1-221ENST00000582240 FGD6Q6ZV73 1430 aa32.03■■■□□ 2.72
PPP4R1-221ENST00000582240 ATP7AQ04656 1500 aa32.03■■■□□ 2.72
PPP4R1-221ENST00000582240 RSPH4AQ5TD94 716 aa32.02■■■□□ 2.72
PPP4R1-221ENST00000582240 BCORL1Q5H9F3 1711 aa32■■■□□ 2.71
PPP4R1-221ENST00000582240 PTPN23Q9H3S7 1636 aa32■■■□□ 2.71
PPP4R1-221ENST00000582240 INO80Q9ULG1 1556 aaPredicted RBP31.99■■■□□ 2.71
PPP4R1-221ENST00000582240 TSPY4P0CV99 314 aa31.99■■■□□ 2.71
PPP4R1-221ENST00000582240 TSPY10P0CW01 314 aa31.99■■■□□ 2.71
PPP4R1-221ENST00000582240 ARHGEF5Q12774 1597 aa31.98■■■□□ 2.71
PPP4R1-221ENST00000582240 ADAMTSL3P82987 1691 aa31.96■■■□□ 2.71
PPP4R1-221ENST00000582240 FAM50AQ14320 339 aaKnown RBP31.96■■■□□ 2.71
PPP4R1-221ENST00000582240 RTEL1-TNFRSF6BF6WH68 1400 aa31.93■■■□□ 2.7
PPP4R1-221ENST00000582240 PLPPR3Q6T4P5 718 aa31.93■■■□□ 2.7
PPP4R1-221ENST00000582240 TCOF1Q13428 1488 aaKnown RBP31.92■■■□□ 2.7
PPP4R1-221ENST00000582240 MADDQ8WXG6 1647 aa31.92■■■□□ 2.7
PPP4R1-221ENST00000582240 A2MP01023 1474 aa31.91■■■□□ 2.7
PPP4R1-221ENST00000582240 REREQ9P2R6 1566 aa31.9■■■□□ 2.7
PPP4R1-221ENST00000582240 ABCC5O15440 1437 aa31.9■■■□□ 2.7
PPP4R1-221ENST00000582240 CHIC2Q9UKJ5 165 aa31.86■■■□□ 2.69
PPP4R1-221ENST00000582240 AGLP35573 1532 aa31.85■■■□□ 2.69
PPP4R1-221ENST00000582240 PTPRMP28827 1452 aa31.84■■■□□ 2.69
PPP4R1-221ENST00000582240 DAPK1P53355 1430 aa31.83■■■□□ 2.69
PPP4R1-221ENST00000582240 RIMS1Q86UR5 1692 aaKnown RBP31.83■■■□□ 2.69
PPP4R1-221ENST00000582240 DHX29Q7Z478 1369 aaKnown RBP31.82■■■□□ 2.69
PPP4R1-221ENST00000582240 GGT6Q6P531 493 aa31.81■■■□□ 2.68
PPP4R1-221ENST00000582240 PLXNC1O60486 1568 aa31.79■■■□□ 2.68
PPP4R1-221ENST00000582240 MAST1Q9Y2H9 1570 aa31.79■■■□□ 2.68
PPP4R1-221ENST00000582240 ADGBQ8N7X0 1667 aa31.79■■■□□ 2.68
PPP4R1-221ENST00000582240 RRP7BPQ9NSQ0 103 aa31.78■■■□□ 2.68
PPP4R1-221ENST00000582240 DNMT1P26358 1616 aaKnown RBP31.78■■■□□ 2.68
PPP4R1-221ENST00000582240 KIF3BO15066 747 aa31.77■■■□□ 2.68
PPP4R1-221ENST00000582240 CEBPAP49715 358 aaPredicted RBP31.77■■■□□ 2.68
PPP4R1-221ENST00000582240 FER1L4A9Z1Z3 1794 aa31.74■■■□□ 2.67
PPP4R1-221ENST00000582240 ITGAEP38570 1179 aa31.73■■■□□ 2.67
PPP4R1-221ENST00000582240 ESF1Q9H501 851 aaKnown RBP31.73■■■□□ 2.67
PPP4R1-221ENST00000582240 CROCC2H7BZ55 1655 aa31.71■■■□□ 2.67
PPP4R1-221ENST00000582240 SHANK2Q9UPX8 1470 aa31.71■■■□□ 2.67
PPP4R1-221ENST00000582240 KIF15Q9NS87 1388 aa31.68■■■□□ 2.66
PPP4R1-221ENST00000582240 PTPRKQ15262 1439 aa31.68■■■□□ 2.66
PPP4R1-221ENST00000582240 ANKRD30AQ9BXX3 1397 aa31.64■■■□□ 2.66
PPP4R1-221ENST00000582240 NCOA1Q15788 1441 aa31.61■■■□□ 2.65
PPP4R1-221ENST00000582240 DUOX2Q9NRD8 1548 aa31.6■■■□□ 2.65
PPP4R1-221ENST00000582240 RRBP1Q9P2E9 1410 aaKnown RBP31.58■■■□□ 2.65
PPP4R1-221ENST00000582240 ZMYM3Q14202 1370 aa31.56■■■□□ 2.64
PPP4R1-221ENST00000582240 CNTLNQ9NXG0 1405 aa31.56■■■□□ 2.64
PPP4R1-221ENST00000582240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.56■■■□□ 2.641e-18■■■■□ 20.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms