RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 DENND4BO75064 1496 aaPredicted RBP28.46■■■□□ 2.15
TOP2A-205ENST00000581055 ADGRL1O94910 1474 aa28.43■■■□□ 2.14
TOP2A-205ENST00000581055 SCAPERQ9BY12 1400 aa28.42■■■□□ 2.14
TOP2A-205ENST00000581055 LRRC9Q6ZRR7 1453 aa28.41■■■□□ 2.14
TOP2A-205ENST00000581055 GPATCH8Q9UKJ3 1502 aaKnown RBP28.41■■■□□ 2.14
TOP2A-205ENST00000581055 CFDP1Q9UEE9 299 aaPredicted RBP28.4■■■□□ 2.14
TOP2A-205ENST00000581055 PREX2Q70Z35 1606 aa28.37■■■□□ 2.13
TOP2A-205ENST00000581055 KANK4Q5T7N3 995 aaPredicted RBP28.37■■■□□ 2.13
TOP2A-205ENST00000581055 ZNF777Q9ULD5 760 aaPredicted RBP28.35■■■□□ 2.13
TOP2A-205ENST00000581055 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
TOP2A-205ENST00000581055 POGZQ7Z3K3 1410 aa28.34■■■□□ 2.13
TOP2A-205ENST00000581055 SUPT6HQ7KZ85 1726 aaKnown RBP28.3■■■□□ 2.12
TOP2A-205ENST00000581055 CDC42BPBQ9Y5S2 1711 aa28.3■■■□□ 2.12
TOP2A-205ENST00000581055 FRMPD1Q5SYB0 1578 aa28.29■■■□□ 2.12
TOP2A-205ENST00000581055 CDC42BPAQ5VT25 1732 aa28.29■■■□□ 2.12
TOP2A-205ENST00000581055 ZNF518AQ6AHZ1 1483 aa28.27■■■□□ 2.12
TOP2A-205ENST00000581055 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
TOP2A-205ENST00000581055 AFAP1Q8N556 730 aa28.26■■■□□ 2.11
TOP2A-205ENST00000581055 MAGI2Q86UL8 1455 aa28.26■■■□□ 2.11
TOP2A-205ENST00000581055 ABCC1P33527 1531 aa28.24■■■□□ 2.11
TOP2A-205ENST00000581055 ZMYM4Q5VZL5 1548 aa28.24■■■□□ 2.11
TOP2A-205ENST00000581055 RICTORQ6R327 1708 aa28.24■■■□□ 2.11
TOP2A-205ENST00000581055 KIAA1107Q9UPP5 1409 aa28.24■■■□□ 2.11
TOP2A-205ENST00000581055 ITSN2Q9NZM3 1697 aa28.21■■■□□ 2.11
TOP2A-205ENST00000581055 ARHGEF12Q9NZN5 1544 aa28.2■■■□□ 2.1
TOP2A-205ENST00000581055 HNRNPMP52272 730 aaKnown RBP eCLIP28.2■■■□□ 2.1
TOP2A-205ENST00000581055 MYT1LQ9UL68 1186 aa28.2■■■□□ 2.1
TOP2A-205ENST00000581055 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.1
TOP2A-205ENST00000581055 TRAPPC8Q9Y2L5 1435 aa28.19■■■□□ 2.1
TOP2A-205ENST00000581055 ZFYVE16Q7Z3T8 1539 aa28.18■■■□□ 2.1
TOP2A-205ENST00000581055 ZNF644Q9H582 1327 aaPredicted RBP28.18■■■□□ 2.1
TOP2A-205ENST00000581055 ARHGEF40Q8TER5 1519 aa28.15■■■□□ 2.1
TOP2A-205ENST00000581055 SYCP2Q9BX26 1530 aa28.15■■■□□ 2.1
TOP2A-205ENST00000581055 MYOM3Q5VTT5 1437 aa28.15■■■□□ 2.1
TOP2A-205ENST00000581055 KDM5CP41229 1560 aa28.15■■■□□ 2.1
TOP2A-205ENST00000581055 YEATS2Q9ULM3 1422 aa28.14■■■□□ 2.1
TOP2A-205ENST00000581055 MLH3Q9UHC1 1453 aa28.13■■■□□ 2.09
TOP2A-205ENST00000581055 MIA2Q96PC5 1412 aa28.12■■■□□ 2.09
TOP2A-205ENST00000581055 RSPH4AQ5TD94 716 aa28.12■■■□□ 2.09
TOP2A-205ENST00000581055 ARID4BQ4LE39 1312 aaPredicted RBP28.12■■■□□ 2.09
TOP2A-205ENST00000581055 SPAG9O60271 1321 aaKnown RBP28.11■■■□□ 2.09
TOP2A-205ENST00000581055 KDM4FA0A1W2PPD8 638 aa28.1■■■□□ 2.09
TOP2A-205ENST00000581055 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
TOP2A-205ENST00000581055 ATP10AO60312 1499 aa28.08■■■□□ 2.09
TOP2A-205ENST00000581055 CAMSAP2Q08AD1 1489 aa28.08■■■□□ 2.09
TOP2A-205ENST00000581055 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
TOP2A-205ENST00000581055 HECW2Q9P2P5 1572 aa28.07■■■□□ 2.08
TOP2A-205ENST00000581055 C9orf84Q5VXU9 1444 aa28.04■■■□□ 2.08
TOP2A-205ENST00000581055 CCDC141Q6ZP82 1450 aa28.01■■■□□ 2.07
TOP2A-205ENST00000581055 TSPY4P0CV99 314 aa28■■■□□ 2.07
TOP2A-205ENST00000581055 TSPY10P0CW01 314 aa28■■■□□ 2.07
TOP2A-205ENST00000581055 FGD6Q6ZV73 1430 aa27.98■■■□□ 2.07
TOP2A-205ENST00000581055 DIP2CQ9Y2E4 1556 aa27.96■■■□□ 2.07
TOP2A-205ENST00000581055 RTEL1-TNFRSF6BF6WH68 1400 aa27.96■■■□□ 2.07
TOP2A-205ENST00000581055 ATP7AQ04656 1500 aa27.95■■■□□ 2.06
TOP2A-205ENST00000581055 ARHGEF5Q12774 1597 aa27.94■■■□□ 2.06
TOP2A-205ENST00000581055 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
TOP2A-205ENST00000581055 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
TOP2A-205ENST00000581055 ABCA6Q8N139 1617 aa27.92■■■□□ 2.06
TOP2A-205ENST00000581055 REREQ9P2R6 1566 aa27.91■■■□□ 2.06
TOP2A-205ENST00000581055 INO80Q9ULG1 1556 aaPredicted RBP27.9■■■□□ 2.06
TOP2A-205ENST00000581055 TCOF1Q13428 1488 aaKnown RBP27.89■■■□□ 2.06
TOP2A-205ENST00000581055 PTPN23Q9H3S7 1636 aa27.89■■■□□ 2.06
TOP2A-205ENST00000581055 MLECQ14165 292 aa27.89■■■□□ 2.06
TOP2A-205ENST00000581055 A2MP01023 1474 aa27.86■■■□□ 2.05
TOP2A-205ENST00000581055 AGLP35573 1532 aa27.86■■■□□ 2.05
TOP2A-205ENST00000581055 BCORL1Q5H9F3 1711 aa27.85■■■□□ 2.05
TOP2A-205ENST00000581055 FAM50AQ14320 339 aaKnown RBP27.85■■■□□ 2.05
TOP2A-205ENST00000581055 ADAMTSL3P82987 1691 aa27.82■■■□□ 2.04
TOP2A-205ENST00000581055 ABCC5O15440 1437 aa27.82■■■□□ 2.04
TOP2A-205ENST00000581055 DHX29Q7Z478 1369 aaKnown RBP27.81■■■□□ 2.04
TOP2A-205ENST00000581055 SIGLEC1Q9BZZ2 1709 aa27.81■■■□□ 2.04
TOP2A-205ENST00000581055 DAPK1P53355 1430 aa27.79■■■□□ 2.04
TOP2A-205ENST00000581055 MAST1Q9Y2H9 1570 aa27.77■■■□□ 2.04
TOP2A-205ENST00000581055 SHANK2Q9UPX8 1470 aa27.77■■■□□ 2.04
TOP2A-205ENST00000581055 ESF1Q9H501 851 aaKnown RBP27.77■■■□□ 2.04
TOP2A-205ENST00000581055 PTPRMP28827 1452 aa27.76■■■□□ 2.03
TOP2A-205ENST00000581055 PLXNC1O60486 1568 aa27.75■■■□□ 2.03
TOP2A-205ENST00000581055 ADGBQ8N7X0 1667 aa27.75■■■□□ 2.03
TOP2A-205ENST00000581055 MADDQ8WXG6 1647 aa27.74■■■□□ 2.03
TOP2A-205ENST00000581055 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
TOP2A-205ENST00000581055 KIF3BO15066 747 aa27.7■■■□□ 2.02
TOP2A-205ENST00000581055 GGT6Q6P531 493 aa27.7■■■□□ 2.02
TOP2A-205ENST00000581055 PPP6R1Q9UPN7 881 aa27.7■■■□□ 2.02
TOP2A-205ENST00000581055 ANKRD30AQ9BXX3 1397 aa27.7■■■□□ 2.02
TOP2A-205ENST00000581055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.7■■■□□ 2.02
TOP2A-205ENST00000581055 CHIC2Q9UKJ5 165 aa27.69■■■□□ 2.02
TOP2A-205ENST00000581055 RRP7BPQ9NSQ0 103 aa27.68■■■□□ 2.02
TOP2A-205ENST00000581055 KIF15Q9NS87 1388 aa27.68■■■□□ 2.02
TOP2A-205ENST00000581055 CNTLNQ9NXG0 1405 aa27.67■■■□□ 2.02
TOP2A-205ENST00000581055 RIMS1Q86UR5 1692 aaKnown RBP27.64■■■□□ 2.02
TOP2A-205ENST00000581055 DUOX2Q9NRD8 1548 aa27.63■■■□□ 2.01
TOP2A-205ENST00000581055 CROCC2H7BZ55 1655 aa27.63■■■□□ 2.01
TOP2A-205ENST00000581055 RRBP1Q9P2E9 1410 aaKnown RBP27.62■■■□□ 2.01
TOP2A-205ENST00000581055 PLPPR3Q6T4P5 718 aa27.62■■■□□ 2.01
TOP2A-205ENST00000581055 FER1L4A9Z1Z3 1794 aa27.61■■■□□ 2.01
TOP2A-205ENST00000581055 NCOA1Q15788 1441 aa27.61■■■□□ 2.01
TOP2A-205ENST00000581055 ADGRL2O95490 1459 aa27.59■■■□□ 2.01
TOP2A-205ENST00000581055 ERBINQ96RT1 1412 aa27.58■■■□□ 2.01
TOP2A-205ENST00000581055 ITGAEP38570 1179 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms